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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000097_pilon:1003900..1008543+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12741.1.p1 ID=MSTRG.12741.1.p1|Name=MSTRG.12741.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4644bp|location=Sequence derived from alignment at sc0000097_pilon:1003900..1008543+ (Clytia hemisphaerica_ch_hm2_pilon) tccattttagccaatttagaagggtttaaatttcaaaattttcttggtcg
gccccaCTAGGTATTGGTCGAATCGATGTTCCAACTTGTATTAAAGACGA
TTTGACAATATTTCCAAACCAAAAGCTTGTAACACAACTGTGCAATGGCA
TCCAAAACTTTCTTATAAACGCTACCAGTAATTTTCAATATAATTACTTA
GCATGGGACAACCCTGGAATCGGCCGCTACCTGATATTCCTCGCCCTGGa
aggttttattttctttgGTATAGTACTTATGATTGAGTATCGTGTTGTTA
GTGGGTTGTATATAAAGATACGTTCTTCGCTCGCGCGGCTGTGTAACTGT
TCGCCCGTCTATGTTCCGACGCGCGACGATTGTTATTTTGACGCGGACGT
TACAAATGAGAAAACAAGGATCGATAATCAGGTGGTGAATAACCATGTGC
TGATGATGAAGAATTTAACAAAAGTATTCCATCCCAGAAGTGGTAAGCAT
TGCTTTGTATGAATTCTTAAGATATAGCTCTTTCTTTTCGAAACTTGAAA
ACATAGCAATAAACCGCCTCGTTGAGTTTGCTTATCTCGGTTACGATTAA
AGCTTTTCATAGCATTTCGTTTGCCGTTTTCTTCCATCGTAAATGAATTG
ccattttcagcaaaaaaaagttatattaTTCTCTCTTCCGCCGGCCGTCA
CTGATATTTGGACCTGTATTTTCACTGCTGAGAGTGTTTGAATTATTTAC
AGtagagtcttcataactcgaacctctacaactcgaataaCTCGAAGGAA
TTTGTTGGTATCGTGACAATTCCCtagtaaaatcttcaaaaattcacaaa
aaacctctacaactcgaaactccataactcgaatgttcCCTTTATCTCGA
ACAGTTTTTGTGGTCCGTTGACAGAACATCGTGCTGTTTTGCCTTTCCAT
AAATCGAACTGTAATAAATCGTTCAACTATATTTGTTCTTGCCTAGCATT
TGAATTTAAGAAAAAGGGCTTAGAGTAAAGATTCAGTCATAGCTGCGATc
tttaacaatgtttttgtgaATCAACCCACAGGTGAACCTCTACTGGCAGT
GGACCACTTATCATTGGGCATTCCCCATGGAGAATGTTTTGGTCTTCTCG
GACAAAACGGTGCTGGTAAAACGACCACGTTCAAAATTCTCACCGGAGAT
GAAACTATGACAAGTGGGTCAGCGAGTATTGATGGGTTTGATGTTGTTCG
AGATGTCGCAGAGGTAAAAGTGGGATAACTTCTTGTAAAATCTTTTGATC
TTGACCGGGAAATATAGGCCaattcacagtcgcaaagcgtaatgggtaat
caggaccactgcgcgctaatgatgacttactattggtccaaagtttaaaa
aaagccggtttttgcgtctagccaacgggaaACCGTTATGGAGGCGCAGT
CAGTTCttattacccatgatccatttcgactgtgaaatggcctatgggGT
ACTCAATTAAGGTTTTCAAGTTttgccattatggaagcaaatttTCGAAC
AGTGCATTTCACGGTCCAAAAGAACCATAGGTAATTAGTGTCACATCGTA
CTCTGAAAACGAGTTTCAGTTGGTCTAAAATTTCCAGTGTTTTCGCGTTT
TACCATCGTGAGCTCATTATGAGGCggaatcagtcctgattacccatgat
tcattttgGCCTATTTGTAGAGACTCCTTACGCAAAAcaaacgtttgctt
ccataatagTGCAAATTACGTAGCTTTGTCAACTTGGAAAAACCTTCAAT
ATTCCTCATGTACAAGAAGGACTTGCTTCAACACTAACAAAATATTTGCG
AATAAACTAGGCACACGTCATACCCAACATACCAAATCTCAAATCTTTGA
ACAAGAGACAAGGATACATAAATTTCTGAGATTTAAATCTTAAATGGTTC
TTTTGTTGCATACTAATATTCTCTTGCGTCAGGTTCGACAACGTATGGGA
TACTGTCCACAATTCGATGCGTTGATCGATTTGATGACTGGTCGAGAATT
ACTATGGATGTATTGTCGTTTGAGGGGAGTTCCTGAACAAGCCATCTCTG
ATACTGTCAATAAACTGGCCAAGGATATAAGTGTTTATGAACATATCGAT
AAATGCACAAAAACCTATAGGTAAGCTGGTACTGTTTAACTATCTCTATG
TTGAAAGGAAATTTTCTAATTtgggttttttttcgtttttttttctattt
tagtgaAACTTCTAAATTGCAAGccaaatttgtattttgtttcTTATCTC
TGATCTTTGTTATTCAATCGTTGCGCTTCAAATCTACAAATCTATCTTTT
TAGCAGTAGCAGCCAAAGAAAATTAAGCGCACCGATCGCATTTCCAATGT
TGATTTTCTTGGACGAGCCATTATTCtatattttttgaatatatttcgTT
TTTAGCGGTGGCAATAAAAGGAAATTAAGCACAGCGATCGCCTTATGCGG
AGATCCAACGTTGATTTTCTTGGACGAACCTTCTTCTGGAATGGATCCTG
TGGCACGACGAATGTTATGGAACTCTTTATCGCAAGTCATCGTGTCCGGA
AAATCTATTGTTATTACGTCACACAGGTAATATATGACAGTTGAAGATGT
AAACAGCTTAGAAATATATCTCGCATCGGTTGATTTCAATCATGTCCTGT
GTACGCATGCCTTCCCCCACTCACTTTTTTGCAGACTATGCTATAATTTA
GTTACTATTTTAATCCATAAAAACTATTACTCTCTGAAATTAGATAACGT
TTTAAGGTTTTTTGAGGGGGGCGCCCAACCATGGTCGCTGATATTTTGcc
cccccccACTCAAAATGTCTCACCGGGGCCCATGGTACGTGCCCCTTTCA
GGGGAAGATGGACTTCAAATTCTCTGACTTTTAGTTAAGGGTATCAAACT
GACCAAGAAGGGGAATCTATAAAATGAATCTTAGCATCATCTTTTGTCTG
AAAACTTCCACGGtatgtacatattttttaaaagaacaaacttcataact
cgaacacgcgtTAGGATCACAAGTTTGTCCGAGAACACAatgcttcgatg
gctaaaaatattaggaacaagttaagaacatttatggACATCCAATTTAT
ATAGGAAATACACAGAAATACTCCACTAAATAATGAAAACACGAACAAGA
TTTCAGgcctaaattcaaaaaaaaattaagaatatccgaaggcttccaAA
GTTGTGGCCGTTTACATTTTTCGAAAGACTAATAATACTCATTTTAAATC
TTTATCATCTTTTCAGTATGGAGGAATGCGAGGCCCTATGCACACGTCTT
GCAATTATGGTGAATGGACAATTCAAATGTCTGGGAAGTGCTcaacattt
gaaaaacaaattcgGTGAAGGTTACACTCTCATCGCCAAAGTTGGTAGGT
TGTCATGTGGTCTGGATATTAGGAGCACGTatactttttatataagaacc
agaAATATTTAAATGAGGctcaagtgtttttttttttgacactttcaatC
TCTAACTCTCTAACAAAAAAGAATGTCTTATATTCGATTGCAAATCAAAT
TAAGAAAATCCCAGCTGACGTTCGATTTTTACCATAATGGTTACTTTAGT
TGATGCTGATGACGCCTCGACTCATGCCCTAGGCTTGGCCTCATTGAAAG
CCTCTTGAGTGACGTGACTATACGTATCAGTTACTGCAAAAAAGATCTAA
TTCAAAATGGATTGACATTACTGGCATTagtctcatggttgattgaaatt
cggatgacgtttttgcttacgttaatttgtaatttccctacTAGATTtcg
taatttccctcctagattttgtaatttcccgcaaaagtgaaattgcCATc
ctttggaaattcatcacctttttcgaatttcttactaacttctaaggatt
aagtaaatggaatactgtccaattaaaactcgattcgcgtttcCATGACT
CGTTGCACtcgtgaaatttcaaaaaaaaaatcaaaattgaccTAGGGAAA
TTTATCCggaatttccctcataaccatgagattactagtacaaattatCC
ACTTTTTTCGATTTAGGTGGAATGAATTTCGACACTCTACCATTACGTCA
TTTCATCCAAGCAACTTTCCCTGGTTCTCTCTTGAAAGACGAGCATCAAG
GCTACATTCACTACCAGCTGAAAACAGATCAAAGCTGGGCACAACTTTTC
GGAATCATGGAAAGAGCGAAACAACAATATAATATTGAAGATTACTCCAT
CAGTCAAACCACTTTGGAACAAGTTTTCTTGAATTTCACTAGAGAACAAA
GAGAGACTGAGGACTAGgctaatttaatttgattttactttttagaaaac
tttatcctgcatgcaatattttatcactttaacttttttGGCGTGAAGCC
CATGTTTTCCTTCGACTGGAAATTTTTATGCTGATTAACCTATCTATTAA
GTGCTCCTGGCATTAATACCAGTAGGTCtggacgtttttttataagaaca
ttttgaagccttgggatgttcttaacttttttagtttcaagccttaaaat
gttcttaatatgttcttattttcgctcttttttgagtatttttg Coding sequence (CDS) from alignment at sc0000097_pilon:1003900..1008543+ >MSTRG.12741.1.p1 ID=MSTRG.12741.1.p1|Name=MSTRG.12741.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6804bp|location=Sequence derived from alignment at sc0000097_pilon:1003900..1008543+ (Clytia hemisphaerica_ch_hm2_pilon) ATGATTGAGTATCGTGTTGTTAGTGGGTTGTATATAAAGATACGTTCTTC GCTCGCGCGGCTGTGTAACTGTTCGCCCGTCTATGTTCCGACGCGCGACG ATTGTTATTTTGACGCGGACGTTACAAATGAGAAAACAAGGATCGATAAT CAGGTGGTGAATAACCATGTGCTGATGATGAAGAATTTAACAAAAGTATT CCATCCCAGAAGTGGTGAACCTCTACTGGCAGTGGACCACTTATCATTGG GCATTCCCCATGGAGAATGTTTTGGTCTTCTCGGACAAAACGGTGCTGGT AAAACGACCACGTTCAAAATTCTCACCGGAGATGAAACTATGACAAGTGG GTCAGCGAGTATTGATGGGTTTGATGTTGTTCGAGATGTCGCAGAGGTTC GACAACGTATGGGATACTGTCCACAATTCGATGCGTTGATCGATTTGATG ACTGGTCGAGAATTACTATGGATGTATTGTCGTTTGAGGGGAGTTCCTGA ACAAGCCATCTCTGATACTGTCAATAAACTGGCCAAGGATATAAGTGTTT ATGAACATATCGATAAATGCACAAAAACCTATAGCGGTGGCAATAAAAGG AAATTAAGCACAGCGATCGCCTTATGCGGAGATCCAACGTTGATTTTCTT GGACGAACCTTCTTCTGGAATGGATCCTGTGGCACGACGAATGTTATGGA ACTCTTTATCGCAAGTCATCGTGTCCGGAAAATCTATTGTTATTACGTCA CACAGTATGGAGGAATGCGAGGCCCTATGCACACGTCTTGCAATTATGGT GAATGGACAATTCAAATGTCTGGGAAGTGCTcaacatttgaaaaacaaat tcgGTGAAGGTTACACTCTCATCGCCAAAGTTGGTGGAATGAATTTCGAC ACTCTACCATTACGTCATTTCATCCAAGCAACTTTCCCTGGTTCTCTCTT GAAAGACGAGCATCAAGGCTACATTCACTACCAGCTGAAAACAGATCAAA GCTGGGCACAACTTTTCGGAATCATGGAAAGAGCGAAACAACAATATAAT ATTGAAGATTACTCCATCAGTCAAACCACTTTGGAACAAGTTTTCTTGAA TTTCACTAGAGAACAAAGAGAGACTGAGGACTAGATGATTGAGTATCGTG TTGTTAGTGGGTTGTATATAAAGATACGTTCTTCGCTCGCGCGGCTGTGT AACTGTTCGCCCGTCTATGTTCCGACGCGCGACGATTGTTATTTTGACGC GGACGTTACAAATGAGAAAACAAGGATCGATAATCAGGTGGTGAATAACC ATGTGCTGATGATGAAGAATTTAACAAAAGTATTCCATCCCAGAAGTGGT GAACCTCTACTGGCAGTGGACCACTTATCATTGGGCATTCCCCATGGAGA ATGTTTTGGTCTTCTCGGACAAAACGGTGCTGGTAAAACGACCACGTTCA AAATTCTCACCGGAGATGAAACTATGACAAGTGGGTCAGCGAGTATTGAT GGGTTTGATGTTGTTCGAGATGTCGCAGAGGTTCGACAACGTATGGGATA CTGTCCACAATTCGATGCGTTGATCGATTTGATGACTGGTCGAGAATTAC TATGGATGTATTGTCGTTTGAGGGGAGTTCCTGAACAAGCCATCTCTGAT ACTGTCAATAAACTGGCCAAGGATATAAGTGTTTATGAACATATCGATAA ATGCACAAAAACCTATAGCGGTGGCAATAAAAGGAAATTAAGCACAGCGA TCGCCTTATGCGGAGATCCAACGTTGATTTTCTTGGACGAACCTTCTTCT GGAATGGATCCTGTGGCACGACGAATGTTATGGAACTCTTTATCGCAAGT CATCGTGTCCGGAAAATCTATTGTTATTACGTCACACAGTATGGAGGAAT GCGAGGCCCTATGCACACGTCTTGCAATTATGGTGAATGGACAATTCAAA TGTCTGGGAAGTGCTcaacatttgaaaaacaaattcgGTGAAGGTTACAC TCTCATCGCCAAAGTTGGTGGAATGAATTTCGACACTCTACCATTACGTC ATTTCATCCAAGCAACTTTCCCTGGTTCTCTCTTGAAAGACGAGCATCAA GGCTACATTCACTACCAGCTGAAAACAGATCAAAGCTGGGCACAACTTTT CGGAATCATGGAAAGAGCGAAACAACAATATAATATTGAAGATTACTCCA TCAGTCAAACCACTTTGGAACAAGTTTTCTTGAATTTCACTAGAGAACAA AGAGAGACTGAGGACTAGATGATTGAGTATCGTGTTGTTAGTGGGTTGTA TATAAAGATACGTTCTTCGCTCGCGCGGCTGTGTAACTGTTCGCCCGTCT ATGTTCCGACGCGCGACGATTGTTATTTTGACGCGGACGTTACAAATGAG AAAACAAGGATCGATAATCAGGTGGTGAATAACCATGTGCTGATGATGAA GAATTTAACAAAAGTATTCCATCCCAGAAGTGGTGAACCTCTACTGGCAG TGGACCACTTATCATTGGGCATTCCCCATGGAGAATGTTTTGGTCTTCTC GGACAAAACGGTGCTGGTAAAACGACCACGTTCAAAATTCTCACCGGAGA TGAAACTATGACAAGTGGGTCAGCGAGTATTGATGGGTTTGATGTTGTTC GAGATGTCGCAGAGGTTCGACAACGTATGGGATACTGTCCACAATTCGAT GCGTTGATCGATTTGATGACTGGTCGAGAATTACTATGGATGTATTGTCG TTTGAGGGGAGTTCCTGAACAAGCCATCTCTGATACTGTCAATAAACTGG CCAAGGATATAAGTGTTTATGAACATATCGATAAATGCACAAAAACCTAT AGCGGTGGCAATAAAAGGAAATTAAGCACAGCGATCGCCTTATGCGGAGA TCCAACGTTGATTTTCTTGGACGAACCTTCTTCTGGAATGGATCCTGTGG CACGACGAATGTTATGGAACTCTTTATCGCAAGTCATCGTGTCCGGAAAA TCTATTGTTATTACGTCACACAGTATGGAGGAATGCGAGGCCCTATGCAC ACGTCTTGCAATTATGGTGAATGGACAATTCAAATGTCTGGGAAGTGCTc aacatttgaaaaacaaattcgGTGAAGGTTACACTCTCATCGCCAAAGTT GGTGGAATGAATTTCGACACTCTACCATTACGTCATTTCATCCAAGCAAC TTTCCCTGGTTCTCTCTTGAAAGACGAGCATCAAGGCTACATTCACTACC AGCTGAAAACAGATCAAAGCTGGGCACAACTTTTCGGAATCATGGAAAGA GCGAAACAACAATATAATATTGAAGATTACTCCATCAGTCAAACCACTTT GGAACAAGTTTTCTTGAATTTCACTAGAGAACAAAGAGAGACTGAGGACT AGATGATTGAGTATCGTGTTGTTAGTGGGTTGTATATAAAGATACGTTCT TCGCTCGCGCGGCTGTGTAACTGTTCGCCCGTCTATGTTCCGACGCGCGA CGATTGTTATTTTGACGCGGACGTTACAAATGAGAAAACAAGGATCGATA ATCAGGTGGTGAATAACCATGTGCTGATGATGAAGAATTTAACAAAAGTA TTCCATCCCAGAAGTGGTGAACCTCTACTGGCAGTGGACCACTTATCATT GGGCATTCCCCATGGAGAATGTTTTGGTCTTCTCGGACAAAACGGTGCTG GTAAAACGACCACGTTCAAAATTCTCACCGGAGATGAAACTATGACAAGT GGGTCAGCGAGTATTGATGGGTTTGATGTTGTTCGAGATGTCGCAGAGGT TCGACAACGTATGGGATACTGTCCACAATTCGATGCGTTGATCGATTTGA TGACTGGTCGAGAATTACTATGGATGTATTGTCGTTTGAGGGGAGTTCCT GAACAAGCCATCTCTGATACTGTCAATAAACTGGCCAAGGATATAAGTGT TTATGAACATATCGATAAATGCACAAAAACCTATAGCGGTGGCAATAAAA GGAAATTAAGCACAGCGATCGCCTTATGCGGAGATCCAACGTTGATTTTC TTGGACGAACCTTCTTCTGGAATGGATCCTGTGGCACGACGAATGTTATG GAACTCTTTATCGCAAGTCATCGTGTCCGGAAAATCTATTGTTATTACGT CACACAGTATGGAGGAATGCGAGGCCCTATGCACACGTCTTGCAATTATG GTGAATGGACAATTCAAATGTCTGGGAAGTGCTcaacatttgaaaaacaa attcgGTGAAGGTTACACTCTCATCGCCAAAGTTGGTGGAATGAATTTCG ACACTCTACCATTACGTCATTTCATCCAAGCAACTTTCCCTGGTTCTCTC TTGAAAGACGAGCATCAAGGCTACATTCACTACCAGCTGAAAACAGATCA AAGCTGGGCACAACTTTTCGGAATCATGGAAAGAGCGAAACAACAATATA ATATTGAAGATTACTCCATCAGTCAAACCACTTTGGAACAAGTTTTCTTG AATTTCACTAGAGAACAAAGAGAGACTGAGGACTAGATGATTGAGTATCG TGTTGTTAGTGGGTTGTATATAAAGATACGTTCTTCGCTCGCGCGGCTGT GTAACTGTTCGCCCGTCTATGTTCCGACGCGCGACGATTGTTATTTTGAC GCGGACGTTACAAATGAGAAAACAAGGATCGATAATCAGGTGGTGAATAA CCATGTGCTGATGATGAAGAATTTAACAAAAGTATTCCATCCCAGAAGTG GTGAACCTCTACTGGCAGTGGACCACTTATCATTGGGCATTCCCCATGGA GAATGTTTTGGTCTTCTCGGACAAAACGGTGCTGGTAAAACGACCACGTT CAAAATTCTCACCGGAGATGAAACTATGACAAGTGGGTCAGCGAGTATTG ATGGGTTTGATGTTGTTCGAGATGTCGCAGAGGTTCGACAACGTATGGGA TACTGTCCACAATTCGATGCGTTGATCGATTTGATGACTGGTCGAGAATT ACTATGGATGTATTGTCGTTTGAGGGGAGTTCCTGAACAAGCCATCTCTG ATACTGTCAATAAACTGGCCAAGGATATAAGTGTTTATGAACATATCGAT AAATGCACAAAAACCTATAGCGGTGGCAATAAAAGGAAATTAAGCACAGC GATCGCCTTATGCGGAGATCCAACGTTGATTTTCTTGGACGAACCTTCTT CTGGAATGGATCCTGTGGCACGACGAATGTTATGGAACTCTTTATCGCAA GTCATCGTGTCCGGAAAATCTATTGTTATTACGTCACACAGTATGGAGGA ATGCGAGGCCCTATGCACACGTCTTGCAATTATGGTGAATGGACAATTCA AATGTCTGGGAAGTGCTcaacatttgaaaaacaaattcgGTGAAGGTTAC ACTCTCATCGCCAAAGTTGGTGGAATGAATTTCGACACTCTACCATTACG TCATTTCATCCAAGCAACTTTCCCTGGTTCTCTCTTGAAAGACGAGCATC AAGGCTACATTCACTACCAGCTGAAAACAGATCAAAGCTGGGCACAACTT TTCGGAATCATGGAAAGAGCGAAACAACAATATAATATTGAAGATTACTC CATCAGTCAAACCACTTTGGAACAAGTTTTCTTGAATTTCACTAGAGAAC AAAGAGAGACTGAGGACTAGATGATTGAGTATCGTGTTGTTAGTGGGTTG TATATAAAGATACGTTCTTCGCTCGCGCGGCTGTGTAACTGTTCGCCCGT CTATGTTCCGACGCGCGACGATTGTTATTTTGACGCGGACGTTACAAATG AGAAAACAAGGATCGATAATCAGGTGGTGAATAACCATGTGCTGATGATG AAGAATTTAACAAAAGTATTCCATCCCAGAAGTGGTGAACCTCTACTGGC AGTGGACCACTTATCATTGGGCATTCCCCATGGAGAATGTTTTGGTCTTC TCGGACAAAACGGTGCTGGTAAAACGACCACGTTCAAAATTCTCACCGGA GATGAAACTATGACAAGTGGGTCAGCGAGTATTGATGGGTTTGATGTTGT TCGAGATGTCGCAGAGGTTCGACAACGTATGGGATACTGTCCACAATTCG ATGCGTTGATCGATTTGATGACTGGTCGAGAATTACTATGGATGTATTGT CGTTTGAGGGGAGTTCCTGAACAAGCCATCTCTGATACTGTCAATAAACT GGCCAAGGATATAAGTGTTTATGAACATATCGATAAATGCACAAAAACCT ATAGCGGTGGCAATAAAAGGAAATTAAGCACAGCGATCGCCTTATGCGGA GATCCAACGTTGATTTTCTTGGACGAACCTTCTTCTGGAATGGATCCTGT GGCACGACGAATGTTATGGAACTCTTTATCGCAAGTCATCGTGTCCGGAA AATCTATTGTTATTACGTCACACAGTATGGAGGAATGCGAGGCCCTATGC ACACGTCTTGCAATTATGGTGAATGGACAATTCAAATGTCTGGGAAGTGC TcaacatttgaaaaacaaattcgGTGAAGGTTACACTCTCATCGCCAAAG TTGGTGGAATGAATTTCGACACTCTACCATTACGTCATTTCATCCAAGCA ACTTTCCCTGGTTCTCTCTTGAAAGACGAGCATCAAGGCTACATTCACTA CCAGCTGAAAACAGATCAAAGCTGGGCACAACTTTTCGGAATCATGGAAA GAGCGAAACAACAATATAATATTGAAGATTACTCCATCAGTCAAACCACT TTGGAACAAGTTTTCTTGAATTTCACTAGAGAACAAAGAGAGACTGAGGA CTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000097_pilon | genome | sc0000097_pilon:1003900..1008543 + |
|