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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000097_pilon:949016..954174+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12736.1.p1 ID=MSTRG.12736.1.p1|Name=MSTRG.12736.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5159bp|location=Sequence derived from alignment at sc0000097_pilon:949016..954174+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAACCGCCACTAATATATTTGCTGGTTGCACTGTCTgttgcaaaataga
aaaatatcttCATAGTGAAAAAGggagaaatacaaaaatatgGAGGAATG
GGCCAACGAGGCAaagtaagattttttaaaatttattcttgAATCAGAAA
ATGACAGCGAAGAAGATATCTAGTAACTTTAGTTACTTACTGTACTGTGA
TAGGATAAAttttcgcagggattaaatttcgcggtggAGCTCGTCCacga
aaatttaagattttgcggggacttaatttcacgaatttttcatgaatttg
tcTTTTTACTGGCAAATTATACatactggttgttgaaatatgCGTTATTg
acgcttctttgatgccagttaactttttaaaagtagttatttgacatttt
ttaagtttaaatttCTATGGGGACTTAATGACACCTAAAACCgaaaaatc
cgcgaaatttaatcaccGCGAAAATTCATCCCGTTAAAGTATGTTTAGAA
CAATATGCATTTGCAGttgcttttttgtttgttattttctttataatgtA
AAACTTCCTAGAAGTACAAGAAAATCCTAACATGAAAATCCTCTAATTCA
GTGCCTCATAATTATTTCGGAAATGGTCCAACAGGTTGTACGGTCTCATA
AAGTAATCTTTATCAGAGTAGAGAGGTAATTCAACTTTGTAGCCACCTCC
ACGCTTGAAGTTGACTTCGGTCCCCGTGTGGTAGTACCCTAACGATTTTA
AAGGAAGAGCAGTCACTGCATCGTTTGCAAAACTCACTCGATAGTGAGTA
CGTTGCATGTATTGGTTAACGAAATCGGCAAAAGCTTTATTGCCAGGTCG
TGGGCAACCAAAGGTTAAGAGATCGGTGTCATAGCCAGCTAGGTTGAGTT
CCAAAGCACAGTAGACGGCTTGAGCAGCGCCTAGCGAGTAGCCAGTGACG
TAGATTTTGGACCGAGGGTATTGTGTTTTGAATTTCTTGACTTGTTCGAA
AACGAATTGTTTTGCGGAATTGTAAGTTTCAACAAATCCTTTGTGAACTT
TACAGAGACTGAGTGCACCACATTAGGCGTATGGGATTAAATCTAATTTC
CAGTTTTGCTGCATATTTGTCATAGTCATGGTACctgaaaagtaaattaa
atttagcttaaagattatcaattattttattaaaagattcaaagaaaata
ttgggTTATAACGTTTGGGTTTTATGGTAATTTTATTGCCTTGATTGTTA
CAATATTTGAACACACATTAACCCACCACTCCGTtactttcaaatatttc
ttgtgtTTTAATATGTGTACACGCCCCTAACTAAGAATAAAATACCAATC
TGGACTTTTCTGGAATCTAGAGtttttttATTCAGCTGGGGTAAAAAGCA
GGGTGGCATGGGTACATGAGGCGCTCCCAGGCCGGTACAGGACCAAAAGA
ATTGAGCGATCTCATATGATGCCAGTGGCTCTTGATAGGTTAGGATATAG
TTGTTTAGCCCAGACGTCTAAACTAAACAAATTCACCAAGTATACATACC
TCTGAAAGCAACTACGATATTTCGACGTTTTGCATCATAAGCCACGTATC
CATAAGCATGTTTCCTTGTATTGAACCATTTCTTGTTTGAAGTGTCTTGA
GGTTTTTCACGATAGATATCTTTCATGTAGTTTAAAACCATTCGGAAGTC
ATCAACATTGAAATCAGGGGTGCTCCCAACGCAATAGTGAAGATAAGCCA
AAGTTATAACGAAAAGACAGAGTACCTTCATGGTTGGGCAGCTGGTGGGG
TCGTTAAGCCTTTACTTTCAACTAAGTCAAAATTGTGACTGATGAAACTC
ATAAAGATTCTCAAGTTTAATTATAGCTATACATATGTTACGTAATTTGG
AATTCATTAATTACAGTTTACGCTGAGCATATTTGAACATCTTTTGATAT
CAAACACAGGTTTTCAAAATAATTGCGCAATAGAACTAAATAGGCTTGTG
CCCAAAtgaccattgattttaaagcccgaagggctagagtagaatctcta
acctttcccaggcaagaaaaagtgaagccacttatttcccatccagaagg
CGCCTAAAACGAGCCCCACttacgacggattgtatctagcggttcctttg
tatTTTAgaactgcatttttttaaaatctagcgatagatagattttattt
tcaatccggtgtttgtgtaaaaaccacgcgcaggcgttctggataggaaa
taagtggcttcgttTTCCCATTCAGGAgactcgagtctagcccttcgggc
ttggaagtcaatgcaAATGACTTTTAAGTGAGACAGTCTAATGGGTTAAA
GTTACTGGTTATTAGCAGCACTTTTGTTACCGAGAGCGAGTTTCTTCCCT
CTCAGAGGTTGGGTTAGATCAATCAAACGAGATCTATGTTTCGTTATTTC
AAcattgaaaattaataaactaTTTTACACGTGAAACTCATCGAAAGGCA
TTTGTATTTTTTCGAGcaaataatttattttaagaGTGCAATagattttg
ctcaaattttgaaGAGCTGTTCAAATGTTGGTTTAATTTTGAACTTCCAT
TTTTCATTATTAGGGTAAACAGCCAATCAAAACGCATGGAAATATCACAT
GAGATGTTAAACTTAGAAGAGAGACAGTGTATCACTGTTTCAAGTAAGTT
TGGAATTATTTTCCCTCGAGATGATACTATCATTAGATAAGTGAGTCATT
GATGACAAAATTCCCACTTATTTTTGGTTATCAAATAAGTGGATACATTT
AACGtttctcctaccatttgcttacacagcattttcaaacaaaagaaaaa
gtagcTTTTCTCCCCAAATTGTGAGAATTGTTTGGTTAATTCTAGTGACC
ATAGGAGGTGAGCCTCGtttctatctcataaaaacttGAAGCTCAACTCA
AGCAAGGTAATAATACAAAGGAAGAAATTTCCATACCATGAAAAATGATG
CCCCAAAGGTTTTCGTGCTTTTCAAGTTTGTTTAAGAATCTTCTAAATGC
TCGCAACTCACATATCACtataaatttgaattgaaatgcGGAATGTATTT
TGGACCGGGACCGTCCTACAGAAAGGCATTTATTTCTGTGCAGAAGAAGT
CTTCCCtgggggggaggggtactacccttgccgaccgacggatgtgctcc
gctgaggttcgaaaaatggaccctgcgtgggactcgttttttcaaaaatt
tgccgaaattggcgaaaaaagtgaccctgaatgggactgaaattccaaaa
tcttctcaaattttctactttttccccaaattttccaaaaaaggcaccct
acgagggactgatttttctatttaggtgtttttgcgaccctacctgggac
tcgtgaaggttaaaaaggtaccctgaccagcggcgcatccccgtaacctA
TTTTGCCCAAGTcccccccccGGAAGTCTTCTTCTCGTCCTTTCTTAGAA
CCCCACTGTTGAGGAGAATTTTCATTTCAGAGTTTTCGTAAGTatcaaat
ctcaaaacttaagaGATATCAATCACCTTTAATTGTAGTACAtttttttG
TCATAGATATTTTGGAACAGAAAAATCCAGATACTCAAGTACGAATGTTA
TGTTTGGATGGTGGAGGCGTGAAAGGAATCATCGAGACAAACACTTTGGA
ATACATGCATTTCTGTTTACAACAATTCACTAAAGGATACTCGGTTACCC
AAACTTTTGACGCCCTCAATGATTTCATAAACGAGAAAGGTGAAAATGTG
ACGTATACTTATGATCCAAATGGAGCgccaaaaatgtataaaatgtttGA
CGTCATGGTAGGGACATCAATGGGAGCCATTATTTCTGTTGCTATGGCGC
GTCTTCACATGTCACCTAATGAACTGAAGAAAGAGGTTCTTGAGATAGCT
ACTGAGATTTTCCCACCGAACAATTTTTGGAATGTACCCGGACATTTTGC
ACGATTGTTGTGTGCTGGATTCCGAGATGGTAGACATCGGTATAGTGAAC
GCCCTTTAGAAGATTATTTAAAAGAACAGCTTAAAGATCATTCATGGTCG
GGTAACTATAACgaccctcattttggtatcgtaGCAACGAAAGCACACGA
CTCGTCCGTCcacattttcaactctaaacaATATAACAAAAGTGACACTG
TTGAAATTTGGCAGGCCATTCGGGCTAGTACTGCAGCTCCAGTCTATTTT
CCGTCTTTTTGTATTGAGGATGATATGACGTCAGAAAATGTTGAGTATAT
TGATGGGGGTCTAGGGGCGAATTGTCCGGTTAGTTACGCCATGCATATGC
TGGAAGAAAATGATACTTTATCTGTTCTTGTTAGCATAGGAGTAGGTGAT
AGTAACCCAAGTAATTTACCGATCGCGCGGGCGTTCCAACACGCACGAAA
CGGAGAAGAAGAATGGGAGAAATTCCGTGCTAGCCGTGGAACCCATAAGA
GCCGAACAATGCACCGATTAGCACCGAGTATTTCATCGGGACTCGGTAAA
TACCGAATGTCAGATAGTTCAAAAGTAGAAGAAATGCAGAATGTTTATCG
CGATTGGTTAAAATCAAGTGATAGTAATTGGTATCGAATAGAACTTGTCT
CAGCGTCCGCTAGCCTGTTCGCTAAATCTCTAAGCGTTCTTGAAGCGACC
GCCGACACCACGTCGACAGGATACAAGCTGAAACTGAAAATCCACGTCAA
ATTTGATGAGAGCATACACTATGGAGAATGCTATATAGATAATGGTTATT
TCTATCCGGGAACGGATACTGGTGAAACCGAATCGGAATTCAAAATTCAT
ATCAAATTATCCGATAATCCGATTATTCTAAACGGGTTATATGAGAAACC
AGACAATAACGGAGAGCTGATTCAtatcaaattcaataattttgagattg
caGGAAGTCcaatgaagataaaaaagaaatttgaactacgtccaaaaaaa
ttttcattgccGTCGAGACGGCCCAGAAATGCATCACTTTTGTGacagaa
aacaattttcaatcaatcgtaaaaggggttacgcacagAGAACGattctc
gtgttcgcaaagcgaaaggatTCTATAGACGCCTCAAGCCCACACTAGTT
ATGTAAGAA Coding sequence (CDS) from alignment at sc0000097_pilon:949016..954174+ >MSTRG.12736.1.p1 ID=MSTRG.12736.1.p1|Name=MSTRG.12736.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4635bp|location=Sequence derived from alignment at sc0000097_pilon:949016..954174+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGAGGAATGGGCCAACGAGGCAaaGGTAAACAGCCAATCAAAACGCAT
GGAAATATCACATGAGATGTTAAACTTAGAAGAGAGACAGTGTATCACTG
TTTCAAATATTTTGGAACAGAAAAATCCAGATACTCAAGTACGAATGTTA
TGTTTGGATGGTGGAGGCGTGAAAGGAATCATCGAGACAAACACTTTGGA
ATACATGCATTTCTGTTTACAACAATTCACTAAAGGATACTCGGTTACCC
AAACTTTTGACGCCCTCAATGATTTCATAAACGAGAAAGGTGAAAATGTG
ACGTATACTTATGATCCAAATGGAGCgccaaaaatgtataaaatgtttGA
CGTCATGGTAGGGACATCAATGGGAGCCATTATTTCTGTTGCTATGGCGC
GTCTTCACATGTCACCTAATGAACTGAAGAAAGAGGTTCTTGAGATAGCT
ACTGAGATTTTCCCACCGAACAATTTTTGGAATGTACCCGGACATTTTGC
ACGATTGTTGTGTGCTGGATTCCGAGATGGTAGACATCGGTATAGTGAAC
GCCCTTTAGAAGATTATTTAAAAGAACAGCTTAAAGATCATTCATGGTCG
GGTAACTATAACgaccctcattttggtatcgtaGCAACGAAAGCACACGA
CTCGTCCGTCcacattttcaactctaaacaATATAACAAAAGTGACACTG
TTGAAATTTGGCAGGCCATTCGGGCTAGTACTGCAGCTCCAGTCTATTTT
CCGTCTTTTTGTATTGAGGATGATATGACGTCAGAAAATGTTGAGTATAT
TGATGGGGGTCTAGGGGCGAATTGTCCGGTTAGTTACGCCATGCATATGC
TGGAAGAAAATGATACTTTATCTGTTCTTGTTAGCATAGGAGTAGGTGAT
AGTAACCCAAGTAATTTACCGATCGCGCGGGCGTTCCAACACGCACGAAA
CGGAGAAGAAGAATGGGAGAAATTCCGTGCTAGCCGTGGAACCCATAAGA
GCCGAACAATGCACCGATTAGCACCGAGTATTTCATCGGGACTCGGTAAA
TACCGAATGTCAGATAGTTCAAAAGTAGAAGAAATGCAGAATGTTTATCG
CGATTGGTTAAAATCAAGTGATAGTAATTGGTATCGAATAGAACTTGTCT
CAGCGTCCGCTAGCCTGTTCGCTAAATCTCTAAGCGTTCTTGAAGCGACC
GCCGACACCACGTCGACAGGATACAAGCTGAAACTGAAAATCCACGTCAA
ATTTGATGAGAGCATACACTATGGAGAATGCTATATAGATAATGGTTATT
TCTATCCGGGAACGGATACTGGTGAAACCGAATCGGAATTCAAAATTCAT
ATCAAATTATCCGATAATCCGATTATTCTAAACGGGTTATATGAGAAACC
AGACAATAACGGAGAGCTGATTCAtatcaaattcaataattttgagattg
caGGAAGTCcaatgaagataaaaaagaaatttgaactacgtccaaaaaaa
ttttcattgccGTCGAGACGGCCCAGAAATGCATCACTTTTGTGaatgGA
GGAATGGGCCAACGAGGCAaaGGTAAACAGCCAATCAAAACGCATGGAAA
TATCACATGAGATGTTAAACTTAGAAGAGAGACAGTGTATCACTGTTTCA
AATATTTTGGAACAGAAAAATCCAGATACTCAAGTACGAATGTTATGTTT
GGATGGTGGAGGCGTGAAAGGAATCATCGAGACAAACACTTTGGAATACA
TGCATTTCTGTTTACAACAATTCACTAAAGGATACTCGGTTACCCAAACT
TTTGACGCCCTCAATGATTTCATAAACGAGAAAGGTGAAAATGTGACGTA
TACTTATGATCCAAATGGAGCgccaaaaatgtataaaatgtttGACGTCA
TGGTAGGGACATCAATGGGAGCCATTATTTCTGTTGCTATGGCGCGTCTT
CACATGTCACCTAATGAACTGAAGAAAGAGGTTCTTGAGATAGCTACTGA
GATTTTCCCACCGAACAATTTTTGGAATGTACCCGGACATTTTGCACGAT
TGTTGTGTGCTGGATTCCGAGATGGTAGACATCGGTATAGTGAACGCCCT
TTAGAAGATTATTTAAAAGAACAGCTTAAAGATCATTCATGGTCGGGTAA
CTATAACgaccctcattttggtatcgtaGCAACGAAAGCACACGACTCGT
CCGTCcacattttcaactctaaacaATATAACAAAAGTGACACTGTTGAA
ATTTGGCAGGCCATTCGGGCTAGTACTGCAGCTCCAGTCTATTTTCCGTC
TTTTTGTATTGAGGATGATATGACGTCAGAAAATGTTGAGTATATTGATG
GGGGTCTAGGGGCGAATTGTCCGGTTAGTTACGCCATGCATATGCTGGAA
GAAAATGATACTTTATCTGTTCTTGTTAGCATAGGAGTAGGTGATAGTAA
CCCAAGTAATTTACCGATCGCGCGGGCGTTCCAACACGCACGAAACGGAG
AAGAAGAATGGGAGAAATTCCGTGCTAGCCGTGGAACCCATAAGAGCCGA
ACAATGCACCGATTAGCACCGAGTATTTCATCGGGACTCGGTAAATACCG
AATGTCAGATAGTTCAAAAGTAGAAGAAATGCAGAATGTTTATCGCGATT
GGTTAAAATCAAGTGATAGTAATTGGTATCGAATAGAACTTGTCTCAGCG
TCCGCTAGCCTGTTCGCTAAATCTCTAAGCGTTCTTGAAGCGACCGCCGA
CACCACGTCGACAGGATACAAGCTGAAACTGAAAATCCACGTCAAATTTG
ATGAGAGCATACACTATGGAGAATGCTATATAGATAATGGTTATTTCTAT
CCGGGAACGGATACTGGTGAAACCGAATCGGAATTCAAAATTCATATCAA
ATTATCCGATAATCCGATTATTCTAAACGGGTTATATGAGAAACCAGACA
ATAACGGAGAGCTGATTCAtatcaaattcaataattttgagattgcaGGA
AGTCcaatgaagataaaaaagaaatttgaactacgtccaaaaaaattttc
attgccGTCGAGACGGCCCAGAAATGCATCACTTTTGTGaatgGAGGAAT
GGGCCAACGAGGCAaaGGTAAACAGCCAATCAAAACGCATGGAAATATCA
CATGAGATGTTAAACTTAGAAGAGAGACAGTGTATCACTGTTTCAAATAT
TTTGGAACAGAAAAATCCAGATACTCAAGTACGAATGTTATGTTTGGATG
GTGGAGGCGTGAAAGGAATCATCGAGACAAACACTTTGGAATACATGCAT
TTCTGTTTACAACAATTCACTAAAGGATACTCGGTTACCCAAACTTTTGA
CGCCCTCAATGATTTCATAAACGAGAAAGGTGAAAATGTGACGTATACTT
ATGATCCAAATGGAGCgccaaaaatgtataaaatgtttGACGTCATGGTA
GGGACATCAATGGGAGCCATTATTTCTGTTGCTATGGCGCGTCTTCACAT
GTCACCTAATGAACTGAAGAAAGAGGTTCTTGAGATAGCTACTGAGATTT
TCCCACCGAACAATTTTTGGAATGTACCCGGACATTTTGCACGATTGTTG
TGTGCTGGATTCCGAGATGGTAGACATCGGTATAGTGAACGCCCTTTAGA
AGATTATTTAAAAGAACAGCTTAAAGATCATTCATGGTCGGGTAACTATA
ACgaccctcattttggtatcgtaGCAACGAAAGCACACGACTCGTCCGTC
cacattttcaactctaaacaATATAACAAAAGTGACACTGTTGAAATTTG
GCAGGCCATTCGGGCTAGTACTGCAGCTCCAGTCTATTTTCCGTCTTTTT
GTATTGAGGATGATATGACGTCAGAAAATGTTGAGTATATTGATGGGGGT
CTAGGGGCGAATTGTCCGGTTAGTTACGCCATGCATATGCTGGAAGAAAA
TGATACTTTATCTGTTCTTGTTAGCATAGGAGTAGGTGATAGTAACCCAA
GTAATTTACCGATCGCGCGGGCGTTCCAACACGCACGAAACGGAGAAGAA
GAATGGGAGAAATTCCGTGCTAGCCGTGGAACCCATAAGAGCCGAACAAT
GCACCGATTAGCACCGAGTATTTCATCGGGACTCGGTAAATACCGAATGT
CAGATAGTTCAAAAGTAGAAGAAATGCAGAATGTTTATCGCGATTGGTTA
AAATCAAGTGATAGTAATTGGTATCGAATAGAACTTGTCTCAGCGTCCGC
TAGCCTGTTCGCTAAATCTCTAAGCGTTCTTGAAGCGACCGCCGACACCA
CGTCGACAGGATACAAGCTGAAACTGAAAATCCACGTCAAATTTGATGAG
AGCATACACTATGGAGAATGCTATATAGATAATGGTTATTTCTATCCGGG
AACGGATACTGGTGAAACCGAATCGGAATTCAAAATTCATATCAAATTAT
CCGATAATCCGATTATTCTAAACGGGTTATATGAGAAACCAGACAATAAC
GGAGAGCTGATTCAtatcaaattcaataattttgagattgcaGGAAGTCc
aatgaagataaaaaagaaatttgaactacgtccaaaaaaattttcattgc
cGTCGAGACGGCCCAGAAATGCATCACTTTTGTGa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000097_pilon | genome | sc0000097_pilon:949016..954174 + |
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