MSTRG.12728.1.p1 (mRNA) -

Overview
NameMSTRG.12728.1.p1
Unique NameMSTRG.12728.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000097_pilon:805024..806572+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12728.1.p1 ID=MSTRG.12728.1.p1|Name=MSTRG.12728.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1549bp|location=Sequence derived from alignment at sc0000097_pilon:805024..806572+ (Clytia hemisphaerica_ch_hm2_pilon)
GACCTATGTCTTATATCTGTTTTTACCCCCCGCTAGTCAATCCCAAGTTT
CGAATTATCTtaatgaaattgacgtcagaagatttattttcgaaaaattg
aaaatgcacTGCAGCAGTCTCCAAATTTTATAACGTCGACATCCTCAAAA
CCTTCAAACGATCGATTACTAGCTGTGTTGTGTTGTGTGCCGTCTTGTTT
ATATTGAAAAGCAGAGAAATCATTAAAATGTCGCTAATAACAGAAGAAGA
ATTTAACTTTATGACACACATCTATGAAGAGCGAATGGCCATATCACAGT
TCAAGGAAATGCATCGGAGAATGGAACGAGCGGCCCATTTCGGTGGAACC
TCGCACGAACAAGAAATTTATGACAAAGAAAGCGAGATCGGTAAGATCAG
ATATTTGATACGTAGAATGGAACTGACAAGAGCTTATTATCACCAACTCG
CAAATAAAGGATTACCATTCAACGACACTTTCTTGACACATTTGAAATTA
GCACATACATTTCTTCAAAACCAACAACGACTTCGTAGGGAAGAGTTGAA
AACACTTCAACAAGAACCTGTCAAGGTTTCAGAAGAACCGGAGAACCAAG
AACCAGACGAAGAATTCAACGAGCTACAATTACCACTCACTAAAAGTGCT
AAACGAAGACTTCGACGAATGAgattgaaaaaccaaaaatcggAAGAAAA
TGAAGTGGCTGACACTGAGGTTGATGCGGTTGACAATACAAAGAACAATT
CTTAACTCTCTAAAACTCTCGGCTTTGGACGTCCCTCAACGAACTgtaat
ttttgtacatttttgtaacacgacagtattcaaagtaatataaatttttg
aattatattttttataagaattgcaACTTCCCTTAGTTCAATATCGTTCA
TTCGTATCTCATTAGATTTGTTATTTTCGGCAAGGATCAATCTCAATTTA
CAAAAAGGGTTTAGGGATCTAAATAAGCCAAACCTTTCGAAAAACCTTTT
GGAAAATTGTCTCCTTTGAAGTGTTTAACCCATTCTAGAGTAGAGTTCGT
AAGTAAGAACAACGAGAACAAGAATAATTTTGAGATCTAATAGCTACGGA
AGCCCATTAGTGCCATTTAGATTCTCATTTAACTTTTTAACGACGcgaaa
ctaaaaaattgacgtcgaaaatgaaatattgacgacgaaactgaaaagtt
gacgacgaaaataaaaaaatgacgacgaaaCACTTCAACAAGAACCTGTC
AAGGTTCATTCATTATCTCACAAAAATGACACTATTAAGTTTAAGTTTTG
GTTGGCAGTGTTAACAGGGTTCCAacatgaaaaacttttcgaTTGTGAAA
TCTTCTCAACTTTTCTTAATGATTTAATAGGCCCAATTGACTCCGGTCCG
CTGCCGTTGAGGTAAACCCGCCCTACTGCGCAGGGATTTAGGGAAATTGC
GCGCTTTAAGAAAATACTTATAGCTTTTGAACTGGAGATATAGGACATGA
GTGatacctttttgaaaaagactatttgttctatttttagaaaatcagg

Coding sequence (CDS) from alignment at sc0000097_pilon:805024..806572+

>MSTRG.12728.1.p1 ID=MSTRG.12728.1.p1|Name=MSTRG.12728.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=528bp|location=Sequence derived from alignment at sc0000097_pilon:805024..806572+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGCTAATAACAGAAGAAGAATTTAACTTTATGACACACATCTATGA
AGAGCGAATGGCCATATCACAGTTCAAGGAAATGCATCGGAGAATGGAAC
GAGCGGCCCATTTCGGTGGAACCTCGCACGAACAAGAAATTTATGACAAA
GAAAGCGAGATCGGTAAGATCAGATATTTGATACGTAGAATGGAACTGAC
AAGAGCTTATTATCACCAACTCGCAAATAAAGGATTACCATTCAACGACA
CTTTCTTGACACATTTGAAATTAGCACATACATTTCTTCAAAACCAACAA
CGACTTCGTAGGGAAGAGTTGAAAACACTTCAACAAGAACCTGTCAAGGT
TTCAGAAGAACCGGAGAACCAAGAACCAGACGAAGAATTCAACGAGCTAC
AATTACCACTCACTAAAAGTGCTAAACGAAGACTTCGACGAATGAgattg
aaaaaccaaaaatcggAAGAAAATGAAGTGGCTGACACTGAGGTTGATGC
GGTTGACAATACAAAGAACAATTCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12728MSTRG.12728Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12728.1.p1.exon1MSTRG.12728.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12728.1.p1MSTRG.12728.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097_pilongenomesc0000097_pilon:805024..806572 +