MSTRG.1262.3.p2 (mRNA) -

Overview
NameMSTRG.1262.3.p2
Unique NameMSTRG.1262.3.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000006_pilon:952790..954983-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1262.3.p2 ID=MSTRG.1262.3.p2|Name=MSTRG.1262.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2194bp|location=Sequence derived from alignment at sc0000006_pilon:952790..954983- (Clytia hemisphaerica_ch_hm2_pilon)
CCTGGTATGGGATGATAATTTATAATGACAAATAAACCGGTTTAAAAGCT
TTCACAATATTCCTTCAAAAAAGGTGGACAAAGACCCTTTCAATCGTGGA
AAGCTGATGAACGTTGGATACAACGAAGCGAAGAAATATTTCCCGTACGA
TTGCGTGGTTTTCCATGATGTTGATCTTTTGCTGGAAGATGACCGACTGA
TGTACTCGTGCCAGTCCTCACCACAACATCTTTCTGTCAGCCTCGATAAA
TATAACTATAGGTATGTTTTCAATATCTTCGAGATGGCGATCAAGCCTTT
GATGTGTATTTCGAGGAGCAAAAATAAAAAAAAAAAATCCAAAAGATTAT
CTTTCTCTAGGATTCAAATCTTTTAATTACAACTTATAAGTACGTCAACA
ACACTTTCAAAAGTTAGGGTTGACAACTTCCATTACTTTAATGGGATAAA
CTTTCGCGCGGATCAAATTTCACGGATTTTGCGGATTTGGGTGTCATCCT
CGAATATCCGCGAAATTAAGTCCCAATGGAAATTTGGAAGGGCCTCATCC
GCGAAATATTTCTAAATAAAACTCAAAAAATGTCAAATAAATACTTTTTG
AATGGTTACTTGCATCAAAGAGGCGCAAATAATGTGTATTTCAACAACCA
ACATGTATGATTTGACAGTGAAAGTCACAAAATCCTGAAAATATTAACAC
CCAATAGTGCCAGCCGCGAAATTAAGTCCCCACGAAACTTTTGAATTTTG
CGGATAGGCCCAACCACGAAATTTAATCCCGCGAAAGTTTATCCCACTAA
AGTAGCTTCAAACGGTCTGCATTTTGTAAAATAGTCTAGTGCATGGAAAT
TCTGGAAAAATTTATTACGCCGCAGGCAAAAATTTTTTTTTCAAGAGGGA
TAAAACCTTCCCCATAGCATAGATTTTTAACATAATTTAAAACATCTTCA
ACTTATCAGTTCTGCCCCCAGTTCTATTACGCAACACTCAGCCCCCCCCC
CTAGCAAGCTAGCCCCCCCTAGCAAGCTAGCCCCCAGTATTTTTTTTGAA
AAATACAGCCCCCAATCAAACAAAAATGGTTTAGCCCATGGTTTAGTGCA
TTCTATGTTATATTTTGAGGACTGCAACAGGTAACGTAAGAGGGTATACA
AGAAACAATGACTAAACAAAGAAATGACATCCATTGTAAATTGACTTGAA
ACATTCTCTACTTTAAGGTTATTATACCAAGAACTATTTGGAGGGATCGA
GATGTTTACAAGAGACCATTTCGAATTGATCAACGGATTTTCAAACTCCT
TTTGGGGATGGGGAGCTGAAGATGACAACTTGTACCGAAGGTAAGTAAAT
GCATGGATCATAATCATCGAGTTGTATTCTCTCTAAATATTCTAAAAAGA
ATACCAAGCTAATTACTAATCGCTACGATAGCTGCTGAATTGTTTTTACT
GAAATTTTTCTTCGGAAAAACCTGACAAAGTATTAAAAGTCTTAAAAGTC
AGAATGTCATTTATCTAAACCGAACTCCTACACCACAATAATAAAGATTC
ACGAGATTGTTATTTTAGATTGGCATGGAAAGGTTTGACACTGTGGAGAC
CATCCGTCCATCGCGCAAGATACAAAATGATCAAGCATGACAACGCAGAA
GTCGACGCAAAAAGTGACAGGTAGGGATCACCATCTATGATTTGTAAAAG
TACTTTATGGGTATTGGTGGCCAGTATTTTGTACATAATTAAAAAAGGAA
CACAGTACACCAATCTAATAAAGCTGATAGGCTACGGCAATTACGTACTT
TTTTTACTTTCAAAAATATTACGTCAAAATATTACCCTTTCAATCAGTGG
TGTCTCATTTTCTCCAAATTTTGTTATTTTCTAGATTCGACATTCGCAAA
GAGTCATACAAACATTTTGCAACTGATGGGTTGAGCTCACTGAAGTATGA
AGTCAAAGAAACCATACTCCATCCAACCCACACACATGTTAAAGTGGACC
TACATATGGCTAAGGATGACTTGTTCGGCATTGTCAATTATGAGAAACCG
AAATGAAGTTGAATAAGTGAACAGAAATCAACGGTGGAAGCAGGGAATAA
ACGAGGCAACCAAGCTACAAGAGAACAGACAGCGGGATGACAGAGAGTTC
TGTAGGCTTTCTCTAGACTCTACACAACCTATGCATAAACGTGT

Coding sequence (CDS) from alignment at sc0000006_pilon:952790..954983-

>MSTRG.1262.3.p2 ID=MSTRG.1262.3.p2|Name=MSTRG.1262.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1089bp|location=Sequence derived from alignment at sc0000006_pilon:952790..954983- (Clytia hemisphaerica_ch_hm2_pilon)
ATTCGACATTCGCAAAGAGTCATACAAACATTTTGCAACTGATGGGTTGA
GCTCACTGAAGTATGAAGTCAAAGAAACCATACTCCATCCAACCCACACA
CATGTTAAAGTGGACCTACATATGGCTAAGGATGACTTGTTCGGCATTGT
CAATTATGAGAAACCGAAATGAATTGGCATGGAAAGGTTTGACACTGTGG
AGACCATCCGTCCATCGCGCAAGATACAAAATGATCAAGCATGACAACGC
AGAAGTCGACGCAAAAAGTGACAGATGTTTACAAGAGACCATTTCGAATT
GATCAACGGATTTTCAAACTCCTTTTGGGGATGGGGAGCTGAAGATGACA
ACTTGTACCGAAGATTCGACATTCGCAAAGAGTCATACAAACATTTTGCA
ACTGATGGGTTGAGCTCACTGAAGTATGAAGTCAAAGAAACCATACTCCA
TCCAACCCACACACATGTTAAAGTGGACCTACATATGGCTAAGGATGACT
TGTTCGGCATTGTCAATTATGAGAAACCGAAATGAATTGGCATGGAAAGG
TTTGACACTGTGGAGACCATCCGTCCATCGCGCAAGATACAAAATGATCA
AGCATGACAACGCAGAAGTCGACGCAAAAAGTGACAGATGTTTACAAGAG
ACCATTTCGAATTGATCAACGGATTTTCAAACTCCTTTTGGGGATGGGGA
GCTGAAGATGACAACTTGTACCGAAGATTCGACATTCGCAAAGAGTCATA
CAAACATTTTGCAACTGATGGGTTGAGCTCACTGAAGTATGAAGTCAAAG
AAACCATACTCCATCCAACCCACACACATGTTAAAGTGGACCTACATATG
GCTAAGGATGACTTGTTCGGCATTGTCAATTATGAGAAACCGAAATGAAT
TGGCATGGAAAGGTTTGACACTGTGGAGACCATCCGTCCATCGCGCAAGA
TACAAAATGATCAAGCATGACAACGCAGAAGTCGACGCAAAAAGTGACAG
ATGTTTACAAGAGACCATTTCGAATTGATCAACGGATTTTCAAACTCCTT
TTGGGGATGGGGAGCTGAAGATGACAACTTGTACCGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1262MSTRG.1262Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1262.3.p2.exon4MSTRG.1262.3.p2.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1262.3.p2.exon3MSTRG.1262.3.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1262.3.p2.exon2MSTRG.1262.3.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1262.3.p2.exon1MSTRG.1262.3.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1262.3.p2MSTRG.1262.3.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000006_pilongenomesc0000006_pilon:952790..954983 -