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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:819482..824631- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12566.1.p1 ID=MSTRG.12566.1.p1|Name=MSTRG.12566.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5150bp|location=Sequence derived from alignment at sc0000095_pilon:819482..824631- (Clytia hemisphaerica_ch_hm2_pilon)
CCCAGGGACAGTAGTAGCACCCTGACAAGAATCTGTTTGGGCAGTTAGCA
GGTGCAGGGTGTTCTGTCCTTGTGCAACAAGAGAACGTGACACAGAAGGG
GCCAGTTATAACCATCAAACCGTAACCGAAACCGTTACCGAACCACTCAA
AATTAAATATCCTTTTCTTTTATTCTTGTTAAAAGTTCAATGAACTAAAC
AGAGTGCAAGACATTTGTTTCTTTAACGGTAGTTTGAGCTGGTTTGTGAG
GACAGAGAGTTGACAGACAGGAGAACACAGCAATGGGAAAGACGAAGTAC
TATGCGGTAGCAAAAGGGTTTAAGACAGGGATTTTTGAGACTTGGGTAGA
GTGCCAAGCACAAGTGAATAATTTCAGAGGGGCAAGCTATAAAAGTTTCA
CAAGTAGAGAAGGAGCAGAAGATTACATGAAGAAAGAAGGCAAGCACGAG
GATGAAGAAAAAGACAAAAAACTGAGCAGAACAAGACAACAGGCTAAGGG
ACAGAAAAAGGAAATAACAGCAGGCAAAAAAGGCAAGGAGGATATAGGGA
AAGAAGAGATTAAATGCAAAAAAGGAGAAACATCACAGAGGCAAGAAAGA
GATAGTGAAGAGGAAGGTGAAGCAAGATGTGGTTTATGTGGTAGAGAAGT
GAAAGACAATGCCAAGGCAATAGAATGTGAATCATGTGAGACGTGGTTTC
ACGCCCACAACAGATGTGGAAGAGAGCTTGAATTGATTCATGAATGGCTA
CAGATGGCTAAGAGCAAAGGGTTAGAAAGTGGGCCGATGAACTGGGTTTG
CAGAACGTGTGAAGAAACAGAGGAGAAAAAGAGGAGAGAAAGGGAAGATG
AAATTGCAAAGCTTAGAAATGAAATAAAGCAAATGAAGGGAGATGCGAAA
CAGGAAGAAGAGTCAAAAAAGCAGTTGGAAGAAGAAATAGAGATATTAAA
AAGGGAGAAAATCAAACGACAAAAAGAAGGAGAAGAAGTGAAGGCAAAAA
ACAAGACACTAGAAGAGGAGATAAAAAAGCTACATAGTAAACTAAATAAG
GAAACAAAAGAAGTAGTTAACGAAGAACTAATGGAAACACAGGAAAAGAA
CAACTTTTTGAAAGATGAAATCGAAATATTGCAGAAAAAAGGAAAAGAGG
AAGAAAAGAAGCATACGAGAGAGGCAGAAAAACTTAAAAAGGAAATAAGA
GCTTACCTGGAGACAATAGAAGAACTAAGAATTGAAAGAAGCAACATTGA
AAGGAAGGTCATTCAGCTGGAGGAAAACCTAAAAGAGGTAATGGAAGTAA
ATAAAGAGCTTGAGATAACAAAAGTAGTAAACATAACATCAAGAAAAGAC
AACAACACTGAGCAAGACAACAACACTAAGCAAGACAACAAGGAGATTGG
TAGAGAGGCAAGCAGAGAAGAGAAGAATAACAGCAGGAAAAAGTGCTACT
ACTTTGAAAAGTACGGAGATTGTAAGTTTGAAGATAGGTGCTGGTTTCAG
CATGACAATAATAGGAAAAAACAACACAACAAGCAAGAGGAGGAACGGCA
GAAATTCTGCAGATACGGTGAGGCTTGCAGATTTGGCCCAGAAAGATGCA
GATACAGACACTACATAGAAGGACAAGAAGATCAAAGAAGAGAGAACAGA
GAAAATGCAATGGAAAATAAGATCATGGCCAAGTTACATGACGTGGTGAG
AAAGCTGGTTACCGAAAATTTTCGACAGGCCAATCAGAACTTCCCCCACC
AAGCATGATCCAACAAAAGCAACCAAAAGAACCGTACCAAGAAAACAAAA
AAGACAAAAAAAAGAAAAAAAGGAAGAAAACAATAGAAAAAAAATTGAAA
GAAGTCACAATATACTATAACAACATCAGAGGACTAAAGTCGAAATGGGA
TAGCCTGCTTATTGCCATTGAGAAAACAACACCAACAATATTTGCCTTAG
TGGAGACTCATATGGAGAGGGGAGAAAAATTAGAAGAAATAACAGGATAC
AAAATCATCAGGAAAGACAGAAATAGTCAAGGAGGAGGAATAGCAATCGG
CTTCAAGAAAGATATATTTGAAAGCGTGGTACAACTGGAGGCAAAAGAGA
CAGAAAATATGGAATCCATGTGGGTGCAGATTGGAACAACAACCAAGTAC
AGACTTGGAGTAATATATGCGCCAAAAGGAGAAAAAGCAAAAGTGAAGGA
GATCAGAGAAATCTATCAAGGGGTCGAGCAAGAAATTCTGAAAGGACAGG
AAGAAGGACATAAGGTACTTGTTGTAGGGGACTTCAACTCAAAAACTAAA
TCTGCAGGAGGACCTGACAAAGGAGGAAAAGAGCTGGAACGGATGACACG
GGAGAGAGATTGTGTGATAGTCAATGACTTGGAGGTTACTGAAGGCAAAT
GGACAAGAGTCGAAAAAGACAAGAAATCAGTTCTTGACTACATGATAATA
GAAAAAACGGAGAAAGATAGTGTAATCCAAATGCTAATAGACGAAGAAAG
ACGGTTCACCCCCTATCATGTGATAAAAGATGACAATGAAGAAATTAAAG
AACAATATACAGACCACAATGCCATAATAAGTACAATCAAGTGGAGCATT
AATATTGAGAGAAGTAATGAAATAAAGGAGGTGATTGGAAAAAAGGGAAT
GTCGAAGTTCAGAGAAATCTTGAAAGGTCAGCAAATCTCAAGGATACTCC
AAGAAAAAGAAGCATTTCAAGACAGATACAACAGATGGGAAGCAAAGGTC
AATAACATCATGAATCTATGCAAAACCAAGGTGAAGAAAAAGAAGGAGCA
AAGTAATAGAGTGAGAGTACTAATGAGGGCAAAGCAGAAAATAAAGAAAT
TGAAACCATCCAAAATAAACAGAAGCAGGCGAAAGCTACTTAACAGACAT
ATAATTCACGAAAGACAACACAGGTATGCAAGGAAGATTCAAAAGACAAT
TGAAGAGTTGAGAAAGAATGGAGGTGGGATGAAGGAGGAGAGTTTCTGGG
AATTCAAAAGAAAAGTCAAAGGAAAGCAACAAGAGATAGCAAGCGAAATG
GTCAACGAGAAAGGGGAAATGGTATCGGAAAAGAGCAAGATTGTTGATGT
CTTCAAAAAGTTCTATGTGGACCTGTTTAAAAAACCAGACAAAGAGTCTT
TTAATGAAGCCCAAATGAAATCAGAATCGACAGTAGAGAAAAAGATCAAA
AACATGAAAGAAGTGGCAAATACACAGGAAGCCCTAACTGTAACCAAGAA
AGAGATAAATGACGTAGTAAGAAAGCTGAAAAGAAGAAAGGCACCTGATT
CTGGAGGATGGAGGAATGAGATGTTGAAAGAGGGAGGTGGTGAGATGATC
AAATCACTGAAAATTATATTCAACGAAATCTTCAGGAACATGATTATACC
AGAGCAGTGGGAAAAAGTAACCGTCAAGTCAATATATAAAAACAAGGGAA
AGAAGACAGAAATGAAGAACAGGAGAGGAATTTTTCTGACCAATACGGTC
AGCAAAGTGTTTGAGAAAGTACTACTTAACAAGGCAGAGTCAAAATTGAA
TATAAACAAATTCCAGAACGGTGGACAAAAGGAGAGATCGACCAAGGACA
ACTGGCTAGCACTGATGGCGGTACTAGACAAGAACAGGGAGGTGGGAAGA
GACACCTACATTATTTGCGCCGATGCAGAAAAGTGTTTCGACCAACTCTG
GCTGGATGACTGTCTAGTAGACCTGAAGGACTGTGGCATGAGAGAGAGAG
AGACCCAACTATTAAAACAGCTAAACCAAAGGGCAAGAATGACGGTTCGG
ACACCTTGTGGAGAGACCGAAGAATTTCAGGTTGAGGAAGTAGTCAAGCA
AGGTACAATATTTGGACCATTGCTGTGCTGCTGCAACACATCAAAGATAG
CAGAAATTGGAGAAGACGCAAGAACAGTAGTCAGCCCAAACCTATCTATA
GCCCCCTTGACTTACGTAGATGATATTACAGCTGCAGGGACTCCCTCATT
GGTTAAGTGTGTTGGGAGAAAGCTACAAATAATGGAGCATGAAAAGCGGT
TCACTTTCAACACGGGAAAAACGAATTACCTGATAATTAAAACCGGAAAG
AGGAAAGAGGAGGTTCAAGAGCTGGATATGAATGTCAAAAGAGGAAAAAT
TGAAAGAGTTGCAAGCTACAAAATCTTAGGCAACTGGATCACAGAAGATG
GCAAACTTTCTGAGCAGTTAAAGGAAATTGAAAAACGGAGTTGGGCTATG
TTAAATGAGCTGAAAGGAACAGTGAAGGAAGAATGGTTGGGATCAATGTC
CACAGATGCAGCACTGCTAGTTTATGAGAGAACAGTCGTCCCAACTCTGA
TATACAACCTGGAATGCTGGACAAGGATTGACAAAAAAGAGATTGAAGAA
TTAGAAAGAATCCAAGCGAGAATACTCAAGTCCATACTAAGAATGCCATC
ATCAACACCTTACTTTGGCATCCTGAAAGAGACTGGGATATGGCCGATTG
AAAAGAAGGTGGTCTATCACAGAATGATGCTCTATCAAAACCTTATAACG
TCAGCCAAAGGCAGATTAGGAAGAGTGGTGATAGAGGACCAGGAATGCAG
TGAAACAGCAAAGACCAATAATTGGGCATCAGAGACAAGAAGAATTGCTA
GAGACATTGGGGTAGACTTGAACACTGCTAAGGAATACAAGAAAGAACTA
TGGAAGAAAACAATAAAGAGGAAAATTGCTGAGCAGATTGAAAGGGAGTT
GGATGAGAAAGAAATGAGAAAGATGAGGCATCAAAGTGGACAAAGGTTTG
AAAGGAAAAGTTATCTAAATAAAATGGGATTAAAGGAAGCTAGTGAAACG
ATGAGAAGGAGGCTTGAAATGATAGATGTTGGTAGTAACTTTGGAAGGAA
GAGAACATGCAGGCTATGCGAGGAGAAAGAAAGCACTGAACACATGATAA
CATGTAGAAGTACAACAGCTCCTGCCGAATTGACAGTAGCATGCTTGAAG
GAAACGGACGATCTTAACATCATTAGACAAACAAATCAATTTCTAAATCT
CCAAATAGAAAAAAGAGACAAAGAGGAAAAACTAAAAGAAACATTGTAAA
CAAATCAAAAGGAAAAAAAAAAAAAGAAACAAATGTCTTGCACCTTATAC
Coding sequence (CDS) from alignment at sc0000095_pilon:819482..824631- >MSTRG.12566.1.p1 ID=MSTRG.12566.1.p1|Name=MSTRG.12566.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3345bp|location=Sequence derived from alignment at sc0000095_pilon:819482..824631- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCCAACAAAAGCAACCAAAAGAACCGTACCAAGAAAACAAAAAAGA
CAAAAAAAAGAAAAAAAGGAAGAAAACAATAGAAAAAAAATTGAAAGAAG
TCACAATATACTATAACAACATCAGAGGACTAAAGTCGAAATGGGATAGC
CTGCTTATTGCCATTGAGAAAACAACACCAACAATATTTGCCTTAGTGGA
GACTCATATGGAGAGGGGAGAAAAATTAGAAGAAATAACAGGATACAAAA
TCATCAGGAAAGACAGAAATAGTCAAGGAGGAGGAATAGCAATCGGCTTC
AAGAAAGATATATTTGAAAGCGTGGTACAACTGGAGGCAAAAGAGACAGA
AAATATGGAATCCATGTGGGTGCAGATTGGAACAACAACCAAGTACAGAC
TTGGAGTAATATATGCGCCAAAAGGAGAAAAAGCAAAAGTGAAGGAGATC
AGAGAAATCTATCAAGGGGTCGAGCAAGAAATTCTGAAAGGACAGGAAGA
AGGACATAAGGTACTTGTTGTAGGGGACTTCAACTCAAAAACTAAATCTG
CAGGAGGACCTGACAAAGGAGGAAAAGAGCTGGAACGGATGACACGGGAG
AGAGATTGTGTGATAGTCAATGACTTGGAGGTTACTGAAGGCAAATGGAC
AAGAGTCGAAAAAGACAAGAAATCAGTTCTTGACTACATGATAATAGAAA
AAACGGAGAAAGATAGTGTAATCCAAATGCTAATAGACGAAGAAAGACGG
TTCACCCCCTATCATGTGATAAAAGATGACAATGAAGAAATTAAAGAACA
ATATACAGACCACAATGCCATAATAAGTACAATCAAGTGGAGCATTAATA
TTGAGAGAAGTAATGAAATAAAGGAGGTGATTGGAAAAAAGGGAATGTCG
AAGTTCAGAGAAATCTTGAAAGGTCAGCAAATCTCAAGGATACTCCAAGA
AAAAGAAGCATTTCAAGACAGATACAACAGATGGGAAGCAAAGGTCAATA
ACATCATGAATCTATGCAAAACCAAGGTGAAGAAAAAGAAGGAGCAAAGT
AATAGAGTGAGAGTACTAATGAGGGCAAAGCAGAAAATAAAGAAATTGAA
ACCATCCAAAATAAACAGAAGCAGGCGAAAGCTACTTAACAGACATATAA
TTCACGAAAGACAACACAGGTATGCAAGGAAGATTCAAAAGACAATTGAA
GAGTTGAGAAAGAATGGAGGTGGGATGAAGGAGGAGAGTTTCTGGGAATT
CAAAAGAAAAGTCAAAGGAAAGCAACAAGAGATAGCAAGCGAAATGGTCA
ACGAGAAAGGGGAAATGGTATCGGAAAAGAGCAAGATTGTTGATGTCTTC
AAAAAGTTCTATGTGGACCTGTTTAAAAAACCAGACAAAGAGTCTTTTAA
TGAAGCCCAAATGAAATCAGAATCGACAGTAGAGAAAAAGATCAAAAACA
TGAAAGAAGTGGCAAATACACAGGAAGCCCTAACTGTAACCAAGAAAGAG
ATAAATGACGTAGTAAGAAAGCTGAAAAGAAGAAAGGCACCTGATTCTGG
AGGATGGAGGAATGAGATGTTGAAAGAGGGAGGTGGTGAGATGATCAAAT
CACTGAAAATTATATTCAACGAAATCTTCAGGAACATGATTATACCAGAG
CAGTGGGAAAAAGTAACCGTCAAGTCAATATATAAAAACAAGGGAAAGAA
GACAGAAATGAAGAACAGGAGAGGAATTTTTCTGACCAATACGGTCAGCA
AAGTGTTTGAGAAAGTACTACTTAACAAGGCAGAGTCAAAATTGAATATA
AACAAATTCCAGAACGGTGGACAAAAGGAGAGATCGACCAAGGACAACTG
GCTAGCACTGATGGCGGTACTAGACAAGAACAGGGAGGTGGGAAGAGACA
CCTACATTATTTGCGCCGATGCAGAAAAGTGTTTCGACCAACTCTGGCTG
GATGACTGTCTAGTAGACCTGAAGGACTGTGGCATGAGAGAGAGAGAGAC
CCAACTATTAAAACAGCTAAACCAAAGGGCAAGAATGACGGTTCGGACAC
CTTGTGGAGAGACCGAAGAATTTCAGGTTGAGGAAGTAGTCAAGCAAGGT
ACAATATTTGGACCATTGCTGTGCTGCTGCAACACATCAAAGATAGCAGA
AATTGGAGAAGACGCAAGAACAGTAGTCAGCCCAAACCTATCTATAGCCC
CCTTGACTTACGTAGATGATATTACAGCTGCAGGGACTCCCTCATTGGTT
AAGTGTGTTGGGAGAAAGCTACAAATAATGGAGCATGAAAAGCGGTTCAC
TTTCAACACGGGAAAAACGAATTACCTGATAATTAAAACCGGAAAGAGGA
AAGAGGAGGTTCAAGAGCTGGATATGAATGTCAAAAGAGGAAAAATTGAA
AGAGTTGCAAGCTACAAAATCTTAGGCAACTGGATCACAGAAGATGGCAA
ACTTTCTGAGCAGTTAAAGGAAATTGAAAAACGGAGTTGGGCTATGTTAA
ATGAGCTGAAAGGAACAGTGAAGGAAGAATGGTTGGGATCAATGTCCACA
GATGCAGCACTGCTAGTTTATGAGAGAACAGTCGTCCCAACTCTGATATA
CAACCTGGAATGCTGGACAAGGATTGACAAAAAAGAGATTGAAGAATTAG
AAAGAATCCAAGCGAGAATACTCAAGTCCATACTAAGAATGCCATCATCA
ACACCTTACTTTGGCATCCTGAAAGAGACTGGGATATGGCCGATTGAAAA
GAAGGTGGTCTATCACAGAATGATGCTCTATCAAAACCTTATAACGTCAG
CCAAAGGCAGATTAGGAAGAGTGGTGATAGAGGACCAGGAATGCAGTGAA
ACAGCAAAGACCAATAATTGGGCATCAGAGACAAGAAGAATTGCTAGAGA
CATTGGGGTAGACTTGAACACTGCTAAGGAATACAAGAAAGAACTATGGA
AGAAAACAATAAAGAGGAAAATTGCTGAGCAGATTGAAAGGGAGTTGGAT
GAGAAAGAAATGAGAAAGATGAGGCATCAAAGTGGACAAAGGTTTGAAAG
GAAAAGTTATCTAAATAAAATGGGATTAAAGGAAGCTAGTGAAACGATGA
GAAGGAGGCTTGAAATGATAGATGTTGGTAGTAACTTTGGAAGGAAGAGA
ACATGCAGGCTATGCGAGGAGAAAGAAAGCACTGAACACATGATAACATG
TAGAAGTACAACAGCTCCTGCCGAATTGACAGTAGCATGCTTGAAGGAAA
CGGACGATCTTAACATCATTAGACAAACAAATCAATTTCTAAATCTCCAA
ATAGAAAAAAGAGACAAAGAGGAAAAACTAAAAGAAACATTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095_pilon | genome | sc0000095_pilon:819482..824631 - |
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