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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:241654..244711- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12444.1.p1 ID=MSTRG.12444.1.p1|Name=MSTRG.12444.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3058bp|location=Sequence derived from alignment at sc0000094_pilon:241654..244711- (Clytia hemisphaerica_ch_hm2_pilon)
AGGTAGGTCCATAAAAGTATCACTTGTTTGTGTGATAGATCATTTGGTCC
AAATTATAGAAAATGAGATGGGGCATGGTCAGATGGTCCCACTTGCTCGG
TAATTGAAAAATGTTATGAAGCAGTATCTCTGGAAAAGCATTTTGCAGTT
CAAACTATCAAAAAAATTATAGAACAATGACAGATTTTCAAATAAGGCTG
TAAATTAAATCAAAAAGCTATGGTAAAATCTTTCACTAAAAAAGCTCAAT
TAAGCATCTTATTCTACCCTGCTTATTCATCCTGCCCTGCTTATTCATCC
TGCCTTAAAATTACGTTTAACCCTGGAAAAAAGGCAAATACACACTTAAA
GAAAAAAAAAACATGTAAAAATAACTTTTCTTGATTAACATTTTTATGCT
TTTACAGACTTTTGGAAATAAAAATACTAAATTTTACTCCCCCAAGTTTA
ATATAAGTTTGGATACTCTGAACCTTGTCCTTGAACTTTTTAAATTTCTG
CCTTCTTTTTACCAGACAAACTGAAACAAGATGATTGAGCTGGTGAAAAA
GTAACAAAGGGAACTAAGGGGAGCCGTTTAAACTCAGACTCGCCACACGA
AAAACGACCATAGGATGTTTTTTATACCTTTCTATTATCCTCTCATTCAA
AACGCTTTTCATAGTGTCCTCCCCCTGGATTCAGGGGGGGATGGGTTTTG
AGGTCAAAAGGACGTATAGGGGGAAGGAATTTTCATTCTAGGCATTGGGG
GGGGGGAAGAGACCCTGAAGGACACTATGCCTTTATTACTTGTTGTCAGT
TCAAGATAAATCTACAAAAAAAGTGTAACCATTCATGTTGTTGTAGTTTT
GTTATGTTGTCTCATTCTAGCAATACTAGAATTTAAATAGAAATGATGAA
AAGAAAGCATGACGATGATGAACACTCTACTGAAATGCATGGGGATATCA
ATAAGTTGCTAGGAGAGCTTCAACCAGCCAAAAAGTTGCTCAAGAATCTG
TTAAAGAAAGGAAGACAATCAAAGGAAGATCTTCATGAGAGTGTCACAAA
GGAGAGTGAAGACGAAATAGAAACTGAAGGAGAAGAAGGGAGCGAGGAAG
ATTTTGGGACAGCTTCTGAAAATGAAAGTGATCTTGAAATTGAAGAAGAG
GTTGTTGATTCTACTGATCCATTTAGTGTTCATTTTGAACAAACTCTGGA
AGAAAATATTGTAGATGCTTTCAAATCAAATGCCAAAATGCAAAAAGTCA
AAACTTTCAAAAAAGCTGGCATGACTGTTGATGAATTCAGTTTTGAAAAT
ATGAAAGATATTTCAGAGCATATTGTAGAGTTTAACTCCCCTCTTCTCAA
TTTTGGAATGGTTTCTGTAAAGGAGAAGTTGTCACAAAATTGGAGTGTTG
TCAACAAGGCTAAAAAGTCTAAAGAAAACCTTACTGGGCTTCAAAGGGAA
CTTTTGAAACCTATATTTTCTTACCAAGATTTATGCTACACTGGTCGTAA
TTTTCATAATGGAGAGGAAATTAGAAAGCTGTATTCGCTTCATGCTGTAA
ATCATGTTTTGAAAACACGTACTAAAATTCTTAAACATAATGCTAAATTA
CAAAGTGCTGCTGAAGCTGGTATTGGAATAGAGGAGGAGCTCCGTGACCA
AGGAATCACCCGTCCGAAAGTGTTGATTGTTGTACCTTTCAAAGATTCTT
GCTTAAAGATTGTGAATGTTTTGAAGAAATTGCTGTTCGGGAATGAAAAG
AAAGTGCAGATAATGAACAAGAAGAGGTTTCAGAAAGAATTTTCTTCAGA
TGAGGCAAGCCATCAAGGATACCGCCCTGAAGATTTTAAGCTGATGTTTG
AGGGTAACATAGATGATGGCTTTCGTATTGGTATTTCCCTTTCTAAAAAC
ACTATGAAACTTTACACTCATTTTTATTCATCTGATATTATTATTGCATC
ACCTCTTGGTTTGCGCACATTGATTGGAGGGAAAGGAGAAAAGCAAGATT
TTGATTTTCTTTCATCAATCGAGTTGCTAATTATAGATCAAGCTGAAGTC
TTCTTAATGCAAAATTGGGATCATCTTATCACTGTATTAGATCACATTAA
CAGAAGACCCAAGAGTACTCACGATACAGATATCTCCCGTGTCCGAATGT
GGTCAATCAATGAATGGTCCAGATATTATCGACAAAACCTCATCTTCTCA
TCCTTCCCCACACCAGAAATCAACAGTATCTTCAATAGATATTTTCAAAA
TTTTGCTGGGAAAACAAAATGGGTCGTTACAGACAGTCCAGGAACTGTGC
AGCATGTTGTTTCAGAGATCCCACAAGTATTCCGTCGTATCAATGTTGAT
GATTATGCTTCTCTTCCTGATAAGAGATTCGAGTTCTTTGTGGATCAAAT
GCTTCCTGATTTAGTAAAAAATCAAAAATCCATCGCCATCTACATCCCAT
CTTATTTTGATTTTGTTCGCGTTCGAAATTACATGAAGAAAGAAGAGATA
GGCTTTGTTCAAATATCTGAGTATACAAAGAAAAGCTACTCCTCACACGC
AAGGACCTTGTTTAGAGAGGGACGAAAGCAGTTTCTCATCTTCACTGGTC
GATTTTTCTTTTATTATCGTTACCGTATCACTGGTATCAGGAATCTTGTG
TTTTATGATATCCCTCTATATCCCCAGTTTTATCCTGAAGTTGTGAACTT
TATCAAAACAGATGATAAGGAGGGTTCACCATCTTGCACTGCCTTATTCA
GTAGGTATGATGCTCTGAAATTACAAGGTGTCGTTGGCACTGAGCGTATG
AAGAAAATGATGTCTGGAAAAGCTGTTCATATGATTGTAACAGGCAAATA
ATTTTTTTAACACGGTCATTTTACTACACTTTTTGTATCTATAATTTTTG
ATTTTATAAAAATTATGATAATGGTTTGTTCATCTATGAGTCATTTTTAC
CATCCCCTCAATCTTTTTTGTTATCAATCTTTTTGGTAAAGCGTCCAATG
TTTCCAGATTATGTGTTCCGACACGAGACCCATTATAAAGCGATAGGAAA
TATTGAGC Coding sequence (CDS) from alignment at sc0000094_pilon:241654..244711- >MSTRG.12444.1.p1 ID=MSTRG.12444.1.p1|Name=MSTRG.12444.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1959bp|location=Sequence derived from alignment at sc0000094_pilon:241654..244711- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAAAGAAAGCATGACGATGATGAACACTCTACTGAAATGCATGG
GGATATCAATAAGTTGCTAGGAGAGCTTCAACCAGCCAAAAAGTTGCTCA
AGAATCTGTTAAAGAAAGGAAGACAATCAAAGGAAGATCTTCATGAGAGT
GTCACAAAGGAGAGTGAAGACGAAATAGAAACTGAAGGAGAAGAAGGGAG
CGAGGAAGATTTTGGGACAGCTTCTGAAAATGAAAGTGATCTTGAAATTG
AAGAAGAGGTTGTTGATTCTACTGATCCATTTAGTGTTCATTTTGAACAA
ACTCTGGAAGAAAATATTGTAGATGCTTTCAAATCAAATGCCAAAATGCA
AAAAGTCAAAACTTTCAAAAAAGCTGGCATGACTGTTGATGAATTCAGTT
TTGAAAATATGAAAGATATTTCAGAGCATATTGTAGAGTTTAACTCCCCT
CTTCTCAATTTTGGAATGGTTTCTGTAAAGGAGAAGTTGTCACAAAATTG
GAGTGTTGTCAACAAGGCTAAAAAGTCTAAAGAAAACCTTACTGGGCTTC
AAAGGGAACTTTTGAAACCTATATTTTCTTACCAAGATTTATGCTACACT
GGTCGTAATTTTCATAATGGAGAGGAAATTAGAAAGCTGTATTCGCTTCA
TGCTGTAAATCATGTTTTGAAAACACGTACTAAAATTCTTAAACATAATG
CTAAATTACAAAGTGCTGCTGAAGCTGGTATTGGAATAGAGGAGGAGCTC
CGTGACCAAGGAATCACCCGTCCGAAAGTGTTGATTGTTGTACCTTTCAA
AGATTCTTGCTTAAAGATTGTGAATGTTTTGAAGAAATTGCTGTTCGGGA
ATGAAAAGAAAGTGCAGATAATGAACAAGAAGAGGTTTCAGAAAGAATTT
TCTTCAGATGAGGCAAGCCATCAAGGATACCGCCCTGAAGATTTTAAGCT
GATGTTTGAGGGTAACATAGATGATGGCTTTCGTATTGGTATTTCCCTTT
CTAAAAACACTATGAAACTTTACACTCATTTTTATTCATCTGATATTATT
ATTGCATCACCTCTTGGTTTGCGCACATTGATTGGAGGGAAAGGAGAAAA
GCAAGATTTTGATTTTCTTTCATCAATCGAGTTGCTAATTATAGATCAAG
CTGAAGTCTTCTTAATGCAAAATTGGGATCATCTTATCACTGTATTAGAT
CACATTAACAGAAGACCCAAGAGTACTCACGATACAGATATCTCCCGTGT
CCGAATGTGGTCAATCAATGAATGGTCCAGATATTATCGACAAAACCTCA
TCTTCTCATCCTTCCCCACACCAGAAATCAACAGTATCTTCAATAGATAT
TTTCAAAATTTTGCTGGGAAAACAAAATGGGTCGTTACAGACAGTCCAGG
AACTGTGCAGCATGTTGTTTCAGAGATCCCACAAGTATTCCGTCGTATCA
ATGTTGATGATTATGCTTCTCTTCCTGATAAGAGATTCGAGTTCTTTGTG
GATCAAATGCTTCCTGATTTAGTAAAAAATCAAAAATCCATCGCCATCTA
CATCCCATCTTATTTTGATTTTGTTCGCGTTCGAAATTACATGAAGAAAG
AAGAGATAGGCTTTGTTCAAATATCTGAGTATACAAAGAAAAGCTACTCC
TCACACGCAAGGACCTTGTTTAGAGAGGGACGAAAGCAGTTTCTCATCTT
CACTGGTCGATTTTTCTTTTATTATCGTTACCGTATCACTGGTATCAGGA
ATCTTGTGTTTTATGATATCCCTCTATATCCCCAGTTTTATCCTGAAGTT
GTGAACTTTATCAAAACAGATGATAAGGAGGGTTCACCATCTTGCACTGC
CTTATTCAGTAGGTATGATGCTCTGAAATTACAAGGTGTCGTTGGCACTG
AGCGTATGAAGAAAATGATGTCTGGAAAAGCTGTTCATATGATTGTAACA
GGCAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:241654..244711 - |
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