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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000093_pilon:779826..784438+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12389.1.p1 ID=MSTRG.12389.1.p1|Name=MSTRG.12389.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4613bp|location=Sequence derived from alignment at sc0000093_pilon:779826..784438+ (Clytia hemisphaerica_ch_hm2_pilon)
aatcaACCTTCCAATTGGGAGGAACACTTTGCATATGAATATGTCCATTA
CTGAGGAACATTTTGAAGAATGAGTGGGGAACGCTTAAAAATAGCCTCAG
AAATGTCAATTCAGGAACGTTtgaggaacgagtgaggaacgcGTAAAAAT
TACGTCCGaaatgtccattcctgaggaacgagtgaggaacgcTTAAAAAT
AGCGTCAGAAATGTCAATTCATGAGGAACGTTCCAGGAATAGATGAGGAA
Tgctaaaacaaagttttgaaatatccattcctgaggaacgttcgaggaac
gcTGAGGAATGTTGAGGAATAGTGAGGAATGGTGATTGGGTTAGTAGTGT
AGGTTCGCGAGAGGACGGGTATACGTCTGAgccaaaaatcaaagaaattt
tggagagaaatttttttgacattttgagacccttttgtcaaaattttggg
tgattttttgGTACCCTTATGGTTCGCACATACCTGTTTTGACTAAGTGT
CCCTCAGGTATATAGCATCATTGTAACATCTTtccaaaattcaattcaat
aacATAATTTTTCAGCCTTTCAGGGCTGCAGCGCAGGGGTTCCTGAACAA
TACCTGCCAAGAAATTTTTGTTCTGTTGAAGGGCCAGGCCAAATTGACTG
TATTGTATATGATTCGTGTCATCGAAGCTTAATTAAAAAAGTTGGTTAGT
TGGTCCATAGAGACTTTTTAGCCAAATTTCTTTACATGCTCTTAAATTTA
TAGCAATATTACAATATCACAACTCACAACTTGAGATTATATGAATTGCA
CCAAAGATCTCACTTTTGATTAGGAATCTTAAATTAAATTCCAGTTATTT
TATGCAGtcgttttttaagaaattaacaaaataacaaTGGCATTTGATGT
TTATGTCTCATACGCTGAAGAAGACTCTCAATGGATTCATGAAAATTTGG
TTGAGGAACTTGAAGAGAGCAGTAATTTGTCAGTTTGTTTACGATCAAGA
GATTTTGATTCTGACCTATCACTGATTGAAAACCGCAAATTGTTTGTAGA
AAAGTGTTCATCCTGTGTGTTAgttttctcaaaaaactatTGCAAAAAAG
CATCTGAATGGAGCTATTTCACTAAGTTAATAAAGAGCAAAGAGGATAAA
TCGATTACTGGACTGCTGGATAATAAAGGTATTTTGTGTATTTATTTGTC
GGAATGTAATGTTCCAGAGCTGTTTAGCAAACAAAAGATGCTAGATTGGA
CAGCAGAAGATTTGAGAGATTTATTCTGGCAAAGattgatcaaattttta
aaaactgctAAAAAGAAATCCGATATTAAAAAAGCATTATCAGGGAAATT
GAAAGACTGTTCAAATACTAATCTAAAAAGTGCTCCTAAGATGAATTTAT
CAAATACCTTAGAAGATGCAGAAGTACTTGAGAATTTGAATGTaaagtca
aatgaggaactagaaactgaggaaaatgaaaatcaaaaagaagaggaaga
agaagaagaacaagaaaaaacaacaaacgttTCTGACTACATACTTTTCG
ACAATGTGTACCCACATTTAGtttcaagttcattttgtgCTGAAGATGAA
GATCTAACTCGAGATGATTTAGAGGATTTAACTTTGAAAATGGAGGATGT
TAAAACTATGATGTTGTTACAGGAAAATAATACACCTCCTGCTGACGAGC
AGAAGATTGGTTTTCAACAACCAGGAATAACTGGAAAAAATaagcatttt
gaaaaatttgaatctcaAAAAGAACAGATGGAGGTTCTAGATGCGTTGCA
GACGATGATGGAAAAGTTTCAATCCAGATATGATTTATTTGctgttcaaa
atcaaaacaataacaatgtCATGTTAATTCTACGTAAAAAGCGGTATAGA
CGAATACTGAAAAATTTTGAGGATTGTATTCTGCAGGCTGTTAATGGGAA
GAAAAATTCAGCATTGATTCATAGTTTGCCTTTTGTTATGGATATGTTAG
AGGGTAATCAAGATATACATGGTTTCCAATGCTGTTGTTGTGGCAATTTA
TTTCATAGTCAAAGAGCGTTGGATATACATTTGGATTTTTGTGTTAAACA
ACACTGGAAAGATCTAATGAAGTTCACACCAAAGTATAAATATTAGAAAT
TATGAGATAAAACCTTTATCTATATTAGAAGGAGGATTCTTCTTATCAGC
TTCATAAGTTTTACTACACAGTACATACTAGTACACgtcattttcattca
aattttgattcaaTTGCATTCAAATTTCTGATGTTTTTGCAAGTAGGATG
CTAGCTTTTGTAGGATATTGTTTTTACTCAAAGAAGGCAAATGCATATTT
CCTGCAACTCTAAAGTAGGAAACAGTAAGGACAGTTTCATAAAATCATAT
ACTTGCAATCATTATCAAAACAAGAGTGCAGAATAACGAACACCCATTTT
ATAAATTGGAATATTCATAAACGGACTGAGGgtcgtttttattttcaatg
gCTGATACGTAGTAATTATccactaaagtctattcacgataagtgtgcac
tcttttttcttttacctataacttttgaaggaattcttcaatctttataa
atttggtatcattggaaagatattagtgagtggaacaatttgaaataaaa
aaatctttaaaaaattctaaaagtgaagataaaaatgaagaagaaaaaaa
agaagatcttgtagagaaagtgctataacttttattttcactggagagat
tctttgatcttaggagatcatcactgtgaagaaatttcattaaaatattt
attaaatataaagtcatgatacaaagttaataagtgattgaccccaaaaa
acagcaagaaactgcagaaaacagcgtttttagacgtcaataagcttata
actttgtttgatatcttttgactgaatgattatttttgagaattcttttt
acagtgacgttcgatgatcaaggattcacctcagtgaaaatgatagttat
agcacttttctacaagatcttcatttttttcttcttcattttcatcttca
tttttagaatttttttaaagatttttttattttaaattgttccactcact
aatatctttccaatgataccaaatttataaagattaaagaattccttcaa
aagttataggtaaaagaaaaaagagtgcacacttatcgtgaatagatcCG
ACGTTTTCTTAAGATCCAGCAGGATTCAGTAGAATAAAGACATATCTAAG
AACCTAGTAATAAAACCTATGTATTATTAAGGTTATCCatatatacatgt
tttttataagcattgcacttataagcatatctagccTCAGATATGGCAAA
ATTTTCAGCATATGATAAGCATTACCTTGAGCCACGAAAAAGTATTTTTC
CGATTTTGACTGTTTTTGGCTGGGATTTAAGGGATTCTTGGAATTTCCCT
AACATTTTGCTTGGGGtataagcatctctgagcctgttctcgaatttttg
tatgcttataaaaaaacatgcagTACATACGCAGTGATTGAGGGTAAAGG
GTAGAAAAGGGTAGGTATTGTTTGAAAGGAGTCATTTGTATTGTTCTCTT
TGAACAATAAGGGGAGGGTGTCAAATAATTTACTGATATTTGCAAAGTAT
TTGCTTATGTACTATATGGTTGACTCCGATGGTACTTGACACCTTATCAG
TAGAGCACTTTAAAGGTGTCATGTCCATAATTGTtattaaagaatatttt
aactcatatattttcttattaaaGGACCAGTTCATTCACTCACTCACTAA
ATTGCCTTTTAGAGAATTAATTAATAGCATGACACATTGATTTGCTTGTA
CTTAAActatttgaaacttttaaattgtcttgttttatgtttttttaaag
GTTATTTTTAGGGATAATGCTGAATAATGATTGacatatttttgataatt
taaaaattattagATTAGATTATACTAAaggtttatttttgaaaatgata
aaaatattagtaGTAATTGTACAGTATATTTTTTAATGCACATTTTCACT
TTAAACTTTCACTTTATATAATGAGATAACGACAATGACTACAGATTGAT
GCGATAATGACATATtaattgaaagttttaattccctttttattgcattt
tattgttttcttttatgaacattgtggattttttggcaataggccatttt
acggtcgaaatgaatcatgggtaattagAACTAACTGCGCCCCCTTAATG
GCTCTCCATTGGTCCAAAATGCTTGACTGacatagacgatgctatcgtcc
gtttaagaGTAGTTAGTTAGTTTAACAGTAACCGCGGGAAAATATGTAAG
CGCAtagtcagggcgtcagggcggtttacgggaaaaaaagtagccactgc
ttactccgcccgaatttatcacgcctcctaaactattcccttttttagtg
atcttgtgtagacgataggatcgtctagacTGACAGAGAGTCTTTAGCAG
AGTACAGAGGTGTTGATTACCCGTGATCTGTTTTGACCGTGAAATGGCTT
TTGTCTGTACTTATTAAGTATGTTCAGATATTCTGCTGCCAATTATAAAA
AGGGAAGATAATT Coding sequence (CDS) from alignment at sc0000093_pilon:779826..784438+ >MSTRG.12389.1.p1 ID=MSTRG.12389.1.p1|Name=MSTRG.12389.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0000093_pilon:779826..784438+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGGCATTTGATGTTTATGTCTCATACGCTGAAGAAGACTCTCAATGGAT
TCATGAAAATTTGGTTGAGGAACTTGAAGAGAGCAGTAATTTGTCAGTTT
GTTTACGATCAAGAGATTTTGATTCTGACCTATCACTGATTGAAAACCGC
AAATTGTTTGTAGAAAAGTGTTCATCCTGTGTGTTAgttttctcaaaaaa
ctatTGCAAAAAAGCATCTGAATGGAGCTATTTCACTAAGTTAATAAAGA
GCAAAGAGGATAAATCGATTACTGGACTGCTGGATAATAAAGGTATTTTG
TGTATTTATTTGTCGGAATGTAATGTTCCAGAGCTGTTTAGCAAACAAAA
GATGCTAGATTGGACAGCAGAAGATTTGAGAGATTTATTCTGGCAAAGat
tgatcaaatttttaaaaactgctAAAAAGAAATCCGATATTAAAAAAGCA
TTATCAGGGAAATTGAAAGACTGTTCAAATACTAATCTAAAAAGTGCTCC
TAAGATGAATTTATCAAATACCTTAGAAGATGCAGAAGTACTTGAGAATT
TGAATGTaaagtcaaatgaggaactagaaactgaggaaaatgaaaatcaa
aaagaagaggaagaagaagaagaacaagaaaaaacaacaaacgttTCTGA
CTACATACTTTTCGACAATGTGTACCCACATTTAGtttcaagttcatttt
gtgCTGAAGATGAAGATCTAACTCGAGATGATTTAGAGGATTTAACTTTG
AAAATGGAGGATGTTAAAACTATGATGTTGTTACAGGAAAATAATACACC
TCCTGCTGACGAGCAGAAGATTGGTTTTCAACAACCAGGAATAACTGGAA
AAAATaagcattttgaaaaatttgaatctcaAAAAGAACAGATGGAGGTT
CTAGATGCGTTGCAGACGATGATGGAAAAGTTTCAATCCAGATATGATTT
ATTTGctgttcaaaatcaaaacaataacaatgtCATGTTAATTCTACGTA
AAAAGCGGTATAGACGAATACTGAAAAATTTTGAGGATTGTATTCTGCAG
GCTGTTAATGGGAAGAAAAATTCAGCATTGATTCATAGTTTGCCTTTTGT
TATGGATATGTTAGAGGGTAATCAAGATATACATGGTTTCCAATGCTGTT
GTTGTGGCAATTTATTTCATAGTCAAAGAGCGTTGGATATACATTTGGAT
TTTTGTGTTAAACAACACTGGAAAGATCTAATGAAGTTCACACCAAAGTA
TAAATATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000093_pilon | genome | sc0000093_pilon:779826..784438 + |
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