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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000092_pilon:1000686..1004039- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12322.1.p1 ID=MSTRG.12322.1.p1|Name=MSTRG.12322.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3354bp|location=Sequence derived from alignment at sc0000092_pilon:1000686..1004039- (Clytia hemisphaerica_ch_hm2_pilon)
AGTAAACCGCAGAATCATTTTCGTTGAAATTGGATCCTGATAATTACTGC
CACTATAATGTTACAGCAGAGCATTAAGAGTTTTTTTCTCGAGAATAGAG
AGAGAGAAGTAAAATCAAATGTTATGAGCGAAGCTTGTATTATATTTTTT
CAAGAAAAAATTGTAATGTTGGTCTTTGTTATCGAAAAGGGAGCTAAAAT
TTATTCATGTGAGTGCTTCAAATTTCGTATTTCTGGAAAAGTTCAGCAGG
TCTACAATGGTCAGGGTTACAATGGTCATTGAGATCATAGCACGCTAGAC
GCATAAGTAAAACAAGCGACAAATTGTAGTTTATACAAACTGATATCATC
CCGTAACAATTATTGTATTTTTATACATGGATTACAAACGACTCCAGGCT
AAGTTCATTGAGTTTAAAGAATAATATTCAACCTTTCTCAAGCAAAATAG
TGAAGCTAGGATACCCAGGGTAGGGATATCATCAAGTTAAATTGAAGGAT
TGATGAAGAAAAAAATTCAATTATCCAATCTAGCTTTTTAATGAAAACTG
CGCGGGCGGCGCAACTTATGTTATAATTACGTGGCTTAAAATCCTGGGAC
AAGCTGGAGTTTTTACAAGCTCTTATTTGATTTGGTTGGTCGTTAAGATG
TGATAAAAGAATCTTATTACTTTTTCTAAAGAACGCGTCATTTCTATCAC
TTTAAATGACCAATTAGTGAAGTATCTTGTAAAAACTCCAGCTCATCCCA
AAATCCTACGTACACCCCTTCTCACAGATTCGGTAGGGGGGGTAAAAATA
GCAGACTGAAACTCGATGGATTTGTTACTCCCATGTTTTTTTATGGCTGG
GGATTTGAATTCCATTGTTTCAAGTCAGGAGATTCAGTGGGGATGAGAAA
AATAGCATAATAATTTGCAGTGAGGATTGGTTTGTATGATTCTTTTCAAT
GGGGACAAAAATTGGAGGATGATTTTCAACTGGGGACGATATTTTGGACA
ATTTTTCCAGTTGGAAGGGTTCCCAGTGTGTCTGTGAGAAAGGGGTGTGA
AAACCAAACGGGTCTCGCAACTTATGTTGTAATTACTCTCGGGTACCTAA
TAAGTAAGTAAGTTTGCGACCGCAGTCGAGTGCGACCCGAAGGCTCCCTT
TTCGTTCGGCTGTCTACCCGAAGGTAGGGGAGGGCGCCACTCCTTTCCCT
GGAATTCTCCACTTACCCTTGATCCGTCTCTTTACTTACTGAGCATCAAG
CAGAGAGGCATCAAGTACCATTTTGGGAATCTTTGGTGTGACCCGGCTAA
GGATCGAACCCACAACCTTGCGCACCGTAGCTGGATGCTCTACCTTCATG
CTACGGTCGCTATAGCGGGGTACCTAATAGCCGGGGGGATTGGAATAAGC
GGGGGGGGGGGGTTGGAATAAAAATGTCCTGGGTGGAATATTTTTGTAAA
GGAGGCTAATACAGCAGAATTGGGACAAAAAAGGGAAATTTCAATTAGCG
GGGGGGGGGGGGGGGGGGGCGGCTATTAGGTACCCGAGAGTAATTGGCTT
TAAATCCTACATAAGAGATTCTTCTGCAGGGTTCAGCTCCCACACAACGT
TTTTCCGACGTTTATCTAATGTTCACAACGTCCAAATAACGTTAAATGAA
CGCTGAAATAATGTTATGTGTCGATTGGGCTATATCCCAATGATCTAATC
TAAATACGATGTCTCACTCTCAATGTGATACATACACTATACTCAAATGG
GATAAATTTTAGCGAGGGTTAAAGCGGGGATTACTCTCGGGTACCTATTA
GCCATCCCCCGACTAATTAATTTTTCAAAAATTTTCCACCCGCAGGACAT
TTTTATTACAACCCCCTTGCTTTGTTTGTTTTGAGAATTTTTCTAAATCC
CTCCTCCTCCACTTATTCCAGCCCCCCTTCTGGCTATTAGGTACCCGAGA
GTAAGTCCCTGTGAAATATTAATTTAATTCCAGCGAAAATTCAACACATT
AAAATATATTGGTCATTGTTCTTAGTATTTAATATTCCTTTGTAATGTGT
TTAATTCATTTTTATTTTTGCTATATTAGAATGAGATGCGATGAATGGGC
AGTCTTAATAGTACTAGCATTCTGTTGTCTTGTCTCCTTGTCATTATTGG
GAACTGATATCTATATATTTTACCGGTACCCAGCAGAAAATGGAATGGTA
CATGGGACATTTGTGGTATTTCTCTGCTTAAACCTTTGTTTAAGATATGT
CTTTCAAACAGTATACACAGACAAGAAAAAATACAACCACCTTATACTCA
ATATAGGTAAAGTATAATCTGCATTGAAACTTCAACAAAAGGAGATCTTT
TTTGTAAAAACTAGCAATTCCTCGAGGGAATTCTATTGTAATACACCCGA
AACAATCCCACAATGCATCGCTTTTTTAGAAAAATCAAAAAGTCCGATAA
TAAGATCCAAATTAAATCTCTTCTGAAAGAACTTTTGCGTCTATTTAATC
TGGTGGATGAAGGACATTTTTGCGACCAAATCCGCCAAGTCCGCAAAATT
TTCTTACCGCGGTACTTTCAGAGCGAACAGATCGTGATAACATGAAGCTT
AATAATTTGACCATTTCTTATTTCTCTTTCTTCTAGAACTGTCGGCAAGT
CTCTTGGCAGCAATCTTGATAGAAGAATCACTTATTCGCATTATTTTCAT
ATCATGGAGTGTGTTCACAACAATTTATATATTCGTTCTCATAATAACGA
AAGTATTCCACCAATATTGGTATGGCAAAGAGAACTTCTCTATTCAAAAA
CAAACTCTATCAGAATTTATTGACGAACAAATGAATACTGATCCACAAAT
CACAATTCGTTGTAAAGCTTTTCGACCAAAATCGATTTGGAAATTTTGGC
AATCTAAAGAAGTAATTGGTAACGATGCTAAAATATTTGTCGACTACGAA
AATTGTATTGATTTGACTGATCAAAGCTCTATTGAAGGTTACAAAAAAAC
ATGGCAAGTAATTATAGACTTTAAAATTGATTTTGAAGAGCAAATAGAGA
CACTATATTTTCGAACGAGCCAACAATTCATTGATGATTTCCGAAAGAGC
TTACTGCAGGAGTACCAAGAAGACTCTGAGATTACAGTCAAATACGATAT
CAGTTTCAGCAGACAAAATAAGACCGTAATTTGTTTAAAAAATGAATCTT
TGGAAATGTTTCTCTGGATTTTAGGTATTCCAGGACTTATGTTGGAAGGT
TTGCTATTGTTTGATGAGAAATGTGGAAGTTGTTATTTTACCAAACGAAT
CACTATTCAAAAGAAAATATCATGATGGAAAATTTCGTTTGAAAAATGTT
TCTT Coding sequence (CDS) from alignment at sc0000092_pilon:1000686..1004039- >MSTRG.12322.1.p1 ID=MSTRG.12322.1.p1|Name=MSTRG.12322.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1830bp|location=Sequence derived from alignment at sc0000092_pilon:1000686..1004039- (Clytia hemisphaerica_ch_hm2_pilon)
AACTGTCGGCAAGTCTCTTGGCAGCAATCTTGATAGAAGAATCACTTATT
CGCATTATTTTCATATCATGGAGTGTGTTCACAACAATTTATATATTCGT
TCTCATAATAACGAAAGTATTCCACCAATATTGGTATGGCAAAGAGAACT
TCTCTATTCAAAAACAAACTCTATCAGAATTTATTGACGAACAAATGAAT
ACTGATCCACAAATCACAATTCGTTGTAAAGCTTTTCGACCAAAATCGAT
TTGGAAATTTTGGCAATCTAAAGAAGTAATTGGTAACGATGCTAAAATAT
TTGTCGACTACGAAAATTGTATTGATTTGACTGATCAAAGCTCTATTGAA
GGTTACAAAAAAACATGGCAAGTAATTATAGACTTTAAAATTGATTTTGA
AGAGCAAATAGAGACACTATATTTTCGAACGAGCCAACAATTCATTGATG
ATTTCCGAAAGAGCTTACTGCAGGAGTACCAAGAAGACTCTGAGATTACA
GTCAAATACGATATCAGTTTCAGCAGACAAAATAAGACCGTAATTTGTTT
AAAAAATGAATCTTTGGAAATGTTTCTCTGGATTTTAGGTATTCCAGGAC
TTATGTTGGAAGGTTTGCTATTGTTTGATGAGAAATGTGGAAGTTGTTAT
TTTACCAAACGAATCACTATTCAAAAGAAAATATCATGAATGAGATGCGA
TGAATGGGCAGTCTTAATAGTACTAGCATTCTGTTGTCTTGTCTCCTTGT
CATTATTGGGAACTGATATCTATATATTTTACCGGTACCCAGCAGAAAAT
GGAATGGTACATGGGACATTTGTGGTATTTCTCTGCTTAAACCTTTGTTT
AAGATATGTCTTTCAAACAGTATACACAGACAAGAAAAAATACAACCACC
TTATACTCAATATAGAACTGTCGGCAAGTCTCTTGGCAGCAATCTTGATA
GAAGAATCACTTATTCGCATTATTTTCATATCATGGAGTGTGTTCACAAC
AATTTATATATTCGTTCTCATAATAACGAAAGTATTCCACCAATATTGGT
ATGGCAAAGAGAACTTCTCTATTCAAAAACAAACTCTATCAGAATTTATT
GACGAACAAATGAATACTGATCCACAAATCACAATTCGTTGTAAAGCTTT
TCGACCAAAATCGATTTGGAAATTTTGGCAATCTAAAGAAGTAATTGGTA
ACGATGCTAAAATATTTGTCGACTACGAAAATTGTATTGATTTGACTGAT
CAAAGCTCTATTGAAGGTTACAAAAAAACATGGCAAGTAATTATAGACTT
TAAAATTGATTTTGAAGAGCAAATAGAGACACTATATTTTCGAACGAGCC
AACAATTCATTGATGATTTCCGAAAGAGCTTACTGCAGGAGTACCAAGAA
GACTCTGAGATTACAGTCAAATACGATATCAGTTTCAGCAGACAAAATAA
GACCGTAATTTGTTTAAAAAATGAATCTTTGGAAATGTTTCTCTGGATTT
TAGGTATTCCAGGACTTATGTTGGAAGGTTTGCTATTGTTTGATGAGAAA
TGTGGAAGTTGTTATTTTACCAAACGAATCACTATTCAAAAGAAAATATC
ATGAATGAGATGCGATGAATGGGCAGTCTTAATAGTACTAGCATTCTGTT
GTCTTGTCTCCTTGTCATTATTGGGAACTGATATCTATATATTTTACCGG
TACCCAGCAGAAAATGGAATGGTACATGGGACATTTGTGGTATTTCTCTG
CTTAAACCTTTGTTTAAGATATGTCTTTCAAACAGTATACACAGACAAGA
AAAAATACAACCACCTTATACTCAATATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000092_pilon | genome | sc0000092_pilon:1000686..1004039 - |
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