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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000092_pilon:622..5120+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12264.2.p1 ID=MSTRG.12264.2.p1|Name=MSTRG.12264.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4499bp|location=Sequence derived from alignment at sc0000092_pilon:622..5120+ (Clytia hemisphaerica_ch_hm2_pilon)
TTATGGGAAATGAGAAAGAAAGTGAATCCAGCATAAAAGATGTTGTAGAG
GTATGTGAGCAAAATGTTAATGAATTCTCAGATGTTACTACTACTACTAG
TCAATGTGGGATTTCAtgaattcattttattttgttttgaaattgccACT
ACTTGAACATACAGCGAGATACAGTCATTTAAAGCACAAAATCCTGTTAT
TTAATGATTGATAtcaatttttatcttaaaaactGCACTAGATCAGACAT
AATTTCGAGCTTTAAGTGGCTGTACCATCCCGCATGTTCAAGTAAGAGAC
TCTCTATAATACActtttcgcttaaaatttctttattagttcatattttt
acgcacttttttccctttttttgcttggaacgtcattcttttggtcaaaa
ttttttttgatcctAATTTGTTTACCCCTTTTAAAAAAGTCTCCAAATAG
AAATCTTCTTTCAAATGAGCAAGAAAATCcaatcctgaaaatgttttcac
aGGTCCTAAGGAATAGCTCTTTACTTTTTGGCTTGTTTAACAACAATCTC
ATGCTTTTAATCAAAAGATTCTCTTGGATGCATTGAAAAAGGGGCACAGT
ATCCTGATGCCTACTCGTCCTTATCAATATGATACTGAACCACAACCAAA
CATCATGGATTATTGTCTCAAAGCTCAAAGAAATAAGGGTATGCCTTTTA
ACTGTAGTTTAGACGGCCCACTTTTTGTCCAGCCTATTCTAATTATGAAT
TGTGAAGTGGGCAGAAAGTTGACAGTCTAAAGTCAATGCATTTTCCACCT
TTAAACGTTTCAATCTGTTCCAAGCAAAGGTTTTAACTGCAAAAATTTTG
CCAACTTGTTGCCCACTTGTTGTCAACTTTTttcctactctaacaattag
gaATAGACGTCGGCCGTCTAACATAGAGCTTTGACACTGAAGTCTTTTAg
aataaagtttgaaattttcattttccccttGTAGCCATTCAAAGTTTAAA
GCAAAAGAAATAACCGTTTAAAAGATCTGATCTAAAGATACTAAGCTTAT
AATATAAAAAGGTGCTTGTGATTAAAAGGATGGTAGAGGAAATGCTTTGA
TGGTATCTTTTTTCTCTTAATCAGATAGTCGTTTGGACAGAGCTTTGGTG
AGCTGTATCactttatcaaaagaaagagTAAGATTCTTGATGAATTTGTT
GAAGAACTGTAAGTCCCGAAAGGTTGGACAAAAGAAGCGAACATTTCTAA
CAAAAAACTGACGCAAATTCCATTTTGTGCCAAGTTTTAAGTGATTATGT
TTagacccaggggggggggggtactttcGACCCTCAGACCTTTACCGGGa
ctaaaatgaagaaaacaaaggaaaattttgtgaattttacgacccttacc
gggacaaatttgaccaaattttcctatttttccaaccatttgtgggactg
aaatttgattttcagatttttctgacccttaacggaactttggaaatcca
aaaaaggtacccttaagggcggcacatataCCGTAccttccatttgccta
agtaccccccccccgggtgtttAGAACAAACTTTGATAGAAATGTCTTCC
AAGGAAGCTTCTCACTCATCAAGCAATACTTCTGACTCATACATTTGAAA
GTTTCACATGTTTGAGGCTATTGTATGGCGTCATGaaactatttttattt
tcagacacAATCAGCCTGATTATCTATTACTAGGTATTTTCATCTGAGGA
TGGATCTTTTACACTGAAGACTCTTATCTTTTCGTTGTGGAGAAGCGTTT
CCAATTTTGGTCTACTGCATATAAACGTTTCAAGATGTGTCAAATTGAAG
GTAAaattttttctatctttttgtaCAATCGGAATTTTTATAACCCAGGT
ATCaaaaaaaaCTGCGTACGTTTGATGGTCAAGATCAGGCCTTGCTTTGA
GCCCAATGTTAATTTTATTATAAAGTTGTCAGTCTcacttaaatttttct
gaatgatttttttttaaatttgatcaagTTGAGCTTTCAAGTCATACGCc
tttaatttaaaattcaaatttcagaaTGTGTAAAAATGCACCAAAATAAG
GGGtcttatatttcattttttttcgcttggtatgttttttttggttAAAT
CCAACTCGTAGTTGCAATTTAGACCATCCGATAAGAAAGCAAGGTGTAAA
ATATAGGATTAGgaaaatagaagaaaagttGATTGTTTCTTgcataaaac
tttttaaaaagaaaatttaagtgGAGTATATCGTTTTCTTCTGATTGATT
TTTCAGTCGTTGGTAAGAGCTGCAAAAGATTTGAACCAACAAGAAGAAGT
TCATGAAGAAAACAATCTCATCTCAAGACATCTCAACTTTGGTAAGCTTA
AATAAGAACTTTaaaaatcagccaaattaaatttttcctaAAATGTAGAT
TACTATAGGTTTgagtttatcgaccTagtgatattcatatttgaagttta
tcgtggcttggatcatgagatttacgtttggctatcGTAAAATCGTAAAA
ACGTAAATCTCGTCATCCAAGCTACGATAAACTTCAAATATGAAGATTAC
TATCGTTAGtttgtttaatgtttttttttctgttgcaCCTTCAGACATGT
TGGAAACACAAAACATCTTACCTGTACACATTGTATCATGTTTGTTGTGT
ACCAAGTACCGTCTCACAAAAGGGGTCTCGTTAGAAGATTTGTCGAAGGA
TGTTGAAGCATGGACggaaaaactgaaagaaatgtCTAAGTATGTTCATa
catctatccgcagacacgtgtttcgtccttcccaggactcattAGCGCGG
CTCGTGTAAGTgagcatagactgctgttgtcaccagagtgcCCAAAACAC
TAAGTGTTGAGCTTTGCATAATCGCTTGTTCatataagtatattcatata
ttatggaaatatattagggaaaaatcaaaatataatagccgcattctttt
tcaccgtccaacatatATTCATATATTAGTTATCAACTGTGTGGTAATAT
TCAGTGAATAATTTGTCACATACTCTTGGCATCACTCGTGGAAAGATAAA
CACGACGTGATTTTCCTGGAATGATAGCTCAGGCAGCTTTCTATTAagtt
tgttactttttttattgttagAATTCTTTAGTAAGCCCCTTTTTTATGGT
AAGAGTGTTTCAGGCACtacaatagatcttatcggagtttttgatttttc
caaaaaaaaaacgatgGATTGTGAGATTCTTTCgagggtattacaataga
aatctcttaggaattccttgagggaattctattgtaatacccccgaaaca
atcccacaatgtatcgctgttttagaaaaatcaaaaactccgataaggtc
tattactTTGAACATTGATCCGGGGTTTAGACCAGATCATTGGTCGTCGT
ATATCGAAAGGAATATCCAACCtgtcaaaaaaacttttgcagGGAAGAGA
AACTTCCTTATCCGCCTCGCAAGGCTAGTTGATAAAAAGTTTTCTTACAT
AATTTCTTGTTTATGCTAACTGCGGTTCTCAAACTATCCTTACTTACTTT
AAACTGTTTCTAGGAACATTGGTTTCTGCGGTGAACCTATCGACTTAACA
TCGCACGCTATACAACTTCTTCACCAGCAAGATTTGATCACGGTTCATGA
AGTCGACAATGAGATCAAACCAAAACTATCAACCATCAAGCAAGCATCCT
TATTTTATCAACACTCTCTGAAAGTAAGGATTTCCTTGTTCGTTTAGAAT
GAAGCAAATCAACGTTTTTGAATGCCTGTATGGTTTACTCATGTTACGGT
TATCGGAGTCACTAGATCAAATGAAATTCTTAACCCATTAAGTGCCATCA
CTCTATTGCTCCGTACACACCCCGAGCGGGATCAAAAACAGGGCGGCATT
GGTTGCGACGCTCCTAAGACCTACAGACCTTACGATTCGTAAATCTTTCA
TCAGTCAATTTCCTTTAGTTCATGGTCATACGAAACCtctttttaaagac
tttttaatTTAGCTTCTCCTCTTTTCCTCTTCAGATGGTGCATACATTCA
TGACAAGGGCAGTTCTAGGTAAAGTTCTTTGCTTACTTACTTATAAAATT
ACTTTTTCTGAAGATTTATAGAACAAATCTCTTTACTAATGAGCCAAATT
TTCATTGCTCCTTCATTCTTCATTCTTCATATGTCTTAAGGTTTTAACGT
TATAAATTTTTCTAGACTTTTGgtgcaatttttttattatattcgGTTTA
TGTTTGCCTCGATATTCTTGTTATTCAATTGTAAGACTGAAAGGCATAGT
GCTGTGACAAACGTCCTATTCtttttttGCGACCTAATTATTTTTATACG
TTGACTTTTGTTACAGCTTGTACGATCATTTCTGAATGTGGTGGTGAAAA
AATCTTGAGATTTCCAAGTACACAtcaaataacttttattggaagCAAG Coding sequence (CDS) from alignment at sc0000092_pilon:622..5120+ >MSTRG.12264.2.p1 ID=MSTRG.12264.2.p1|Name=MSTRG.12264.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4704bp|location=Sequence derived from alignment at sc0000092_pilon:622..5120+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAATGAGAAAGAAAGTGAATCCAGCATAAAAGATGTTGTAGAGGT
ATTTTCATCTGAGGATGGATCTTTTACACTGAAGACTCTTATCTTTTCGT
TGTGGAGAAGCGTTTCCAATTTTGGTCTACTGCATATAAACGTTTCAAGA
TGTGTCAAATTGAAGTCGTTGGTAAGAGCTGCAAAAGATTTGAACCAACA
AGAAGAAGTTCATGAAGAAAACAATCTCATCTCAAGACATCTCAACTTTG
ACATGTTGGAAACACAAAACATCTTACCTGTACACATTGTATCATGTTTG
TTGTGTACCAAGTACCGTCTCACAAAAGGGGTCTCGTTAGAAGATTTGTC
GAAGGATGTTGAAGCATGGACggaaaaactgaaagaaatgtCTAAGAACA
TTGGTTTCTGCGGTGAACCTATCGACTTAACATCGCACGCTATACAACTT
CTTCACCAGCAAGATTTGATCACGGTTCATGAAGTCGACAATGAGATCAA
ACCAAAACTATCAACCATCAAGCAAGCATCCTTATTTTATCAACACTCTC
TGAAAATGGTGCATACATTCATGACAAGGGCAGTTCTAGCTTGTACGATC
ATTTCTGAATGTGGTGGTGAAAAAATCTTGAGATTTCCAAGTACACAtca
aataacttttattggaagCAAGATGGGAAATGAGAAAGAAAGTGAATCCA
GCATAAAAGATGTTGTAGAGGTATTTTCATCTGAGGATGGATCTTTTACA
CTGAAGACTCTTATCTTTTCGTTGTGGAGAAGCGTTTCCAATTTTGGTCT
ACTGCATATAAACGTTTCAAGATGTGTCAAATTGAAGTCGTTGGTAAGAG
CTGCAAAAGATTTGAACCAACAAGAAGAAGTTCATGAAGAAAACAATCTC
ATCTCAAGACATCTCAACTTTGACATGTTGGAAACACAAAACATCTTACC
TGTACACATTGTATCATGTTTGTTGTGTACCAAGTACCGTCTCACAAAAG
GGGTCTCGTTAGAAGATTTGTCGAAGGATGTTGAAGCATGGACggaaaaa
ctgaaagaaatgtCTAAGAACATTGGTTTCTGCGGTGAACCTATCGACTT
AACATCGCACGCTATACAACTTCTTCACCAGCAAGATTTGATCACGGTTC
ATGAAGTCGACAATGAGATCAAACCAAAACTATCAACCATCAAGCAAGCA
TCCTTATTTTATCAACACTCTCTGAAAATGGTGCATACATTCATGACAAG
GGCAGTTCTAGCTTGTACGATCATTTCTGAATGTGGTGGTGAAAAAATCT
TGAGATTTCCAAGTACACAtcaaataacttttattggaagCAAGATGGGA
AATGAGAAAGAAAGTGAATCCAGCATAAAAGATGTTGTAGAGGTATTTTC
ATCTGAGGATGGATCTTTTACACTGAAGACTCTTATCTTTTCGTTGTGGA
GAAGCGTTTCCAATTTTGGTCTACTGCATATAAACGTTTCAAGATGTGTC
AAATTGAAGTCGTTGGTAAGAGCTGCAAAAGATTTGAACCAACAAGAAGA
AGTTCATGAAGAAAACAATCTCATCTCAAGACATCTCAACTTTGACATGT
TGGAAACACAAAACATCTTACCTGTACACATTGTATCATGTTTGTTGTGT
ACCAAGTACCGTCTCACAAAAGGGGTCTCGTTAGAAGATTTGTCGAAGGA
TGTTGAAGCATGGACggaaaaactgaaagaaatgtCTAAGAACATTGGTT
TCTGCGGTGAACCTATCGACTTAACATCGCACGCTATACAACTTCTTCAC
CAGCAAGATTTGATCACGGTTCATGAAGTCGACAATGAGATCAAACCAAA
ACTATCAACCATCAAGCAAGCATCCTTATTTTATCAACACTCTCTGAAAA
TGGTGCATACATTCATGACAAGGGCAGTTCTAGCTTGTACGATCATTTCT
GAATGTGGTGGTGAAAAAATCTTGAGATTTCCAAGTACACAtcaaataac
ttttattggaagCAAGATGGGAAATGAGAAAGAAAGTGAATCCAGCATAA
AAGATGTTGTAGAGGTATTTTCATCTGAGGATGGATCTTTTACACTGAAG
ACTCTTATCTTTTCGTTGTGGAGAAGCGTTTCCAATTTTGGTCTACTGCA
TATAAACGTTTCAAGATGTGTCAAATTGAAGTCGTTGGTAAGAGCTGCAA
AAGATTTGAACCAACAAGAAGAAGTTCATGAAGAAAACAATCTCATCTCA
AGACATCTCAACTTTGACATGTTGGAAACACAAAACATCTTACCTGTACA
CATTGTATCATGTTTGTTGTGTACCAAGTACCGTCTCACAAAAGGGGTCT
CGTTAGAAGATTTGTCGAAGGATGTTGAAGCATGGACggaaaaactgaaa
gaaatgtCTAAGAACATTGGTTTCTGCGGTGAACCTATCGACTTAACATC
GCACGCTATACAACTTCTTCACCAGCAAGATTTGATCACGGTTCATGAAG
TCGACAATGAGATCAAACCAAAACTATCAACCATCAAGCAAGCATCCTTA
TTTTATCAACACTCTCTGAAAATGGTGCATACATTCATGACAAGGGCAGT
TCTAGCTTGTACGATCATTTCTGAATGTGGTGGTGAAAAAATCTTGAGAT
TTCCAAGTACACAtcaaataacttttattggaagCAAGATGGGAAATGAG
AAAGAAAGTGAATCCAGCATAAAAGATGTTGTAGAGGTATTTTCATCTGA
GGATGGATCTTTTACACTGAAGACTCTTATCTTTTCGTTGTGGAGAAGCG
TTTCCAATTTTGGTCTACTGCATATAAACGTTTCAAGATGTGTCAAATTG
AAGTCGTTGGTAAGAGCTGCAAAAGATTTGAACCAACAAGAAGAAGTTCA
TGAAGAAAACAATCTCATCTCAAGACATCTCAACTTTGACATGTTGGAAA
CACAAAACATCTTACCTGTACACATTGTATCATGTTTGTTGTGTACCAAG
TACCGTCTCACAAAAGGGGTCTCGTTAGAAGATTTGTCGAAGGATGTTGA
AGCATGGACggaaaaactgaaagaaatgtCTAAGAACATTGGTTTCTGCG
GTGAACCTATCGACTTAACATCGCACGCTATACAACTTCTTCACCAGCAA
GATTTGATCACGGTTCATGAAGTCGACAATGAGATCAAACCAAAACTATC
AACCATCAAGCAAGCATCCTTATTTTATCAACACTCTCTGAAAATGGTGC
ATACATTCATGACAAGGGCAGTTCTAGCTTGTACGATCATTTCTGAATGT
GGTGGTGAAAAAATCTTGAGATTTCCAAGTACACAtcaaataacttttat
tggaagCAAGATGGGAAATGAGAAAGAAAGTGAATCCAGCATAAAAGATG
TTGTAGAGGTATTTTCATCTGAGGATGGATCTTTTACACTGAAGACTCTT
ATCTTTTCGTTGTGGAGAAGCGTTTCCAATTTTGGTCTACTGCATATAAA
CGTTTCAAGATGTGTCAAATTGAAGTCGTTGGTAAGAGCTGCAAAAGATT
TGAACCAACAAGAAGAAGTTCATGAAGAAAACAATCTCATCTCAAGACAT
CTCAACTTTGACATGTTGGAAACACAAAACATCTTACCTGTACACATTGT
ATCATGTTTGTTGTGTACCAAGTACCGTCTCACAAAAGGGGTCTCGTTAG
AAGATTTGTCGAAGGATGTTGAAGCATGGACggaaaaactgaaagaaatg
tCTAAGAACATTGGTTTCTGCGGTGAACCTATCGACTTAACATCGCACGC
TATACAACTTCTTCACCAGCAAGATTTGATCACGGTTCATGAAGTCGACA
ATGAGATCAAACCAAAACTATCAACCATCAAGCAAGCATCCTTATTTTAT
CAACACTCTCTGAAAATGGTGCATACATTCATGACAAGGGCAGTTCTAGC
TTGTACGATCATTTCTGAATGTGGTGGTGAAAAAATCTTGAGATTTCCAA
GTACACAtcaaataacttttattggaagCAAGATGGGAAATGAGAAAGAA
AGTGAATCCAGCATAAAAGATGTTGTAGAGGTATTTTCATCTGAGGATGG
ATCTTTTACACTGAAGACTCTTATCTTTTCGTTGTGGAGAAGCGTTTCCA
ATTTTGGTCTACTGCATATAAACGTTTCAAGATGTGTCAAATTGAAGTCG
TTGGTAAGAGCTGCAAAAGATTTGAACCAACAAGAAGAAGTTCATGAAGA
AAACAATCTCATCTCAAGACATCTCAACTTTGACATGTTGGAAACACAAA
ACATCTTACCTGTACACATTGTATCATGTTTGTTGTGTACCAAGTACCGT
CTCACAAAAGGGGTCTCGTTAGAAGATTTGTCGAAGGATGTTGAAGCATG
GACggaaaaactgaaagaaatgtCTAAGAACATTGGTTTCTGCGGTGAAC
CTATCGACTTAACATCGCACGCTATACAACTTCTTCACCAGCAAGATTTG
ATCACGGTTCATGAAGTCGACAATGAGATCAAACCAAAACTATCAACCAT
CAAGCAAGCATCCTTATTTTATCAACACTCTCTGAAAATGGTGCATACAT
TCATGACAAGGGCAGTTCTAGCTTGTACGATCATTTCTGAATGTGGTGGT
GAAAAAATCTTGAGATTTCCAAGTACACAtcaaataacttttattggaag
CAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000092_pilon | genome | sc0000092_pilon:622..5120 + |
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