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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000090_pilon:1265547..1270036- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12169.1.p1 ID=MSTRG.12169.1.p1|Name=MSTRG.12169.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4490bp|location=Sequence derived from alignment at sc0000090_pilon:1265547..1270036- (Clytia hemisphaerica_ch_hm2_pilon)
AGTCGAATAATTACGAAGCAAAGCAGAGACGTTTGGCAAGAAAGATGGAG
AAAAACAAAGAGAGGAAGAAAGGCAAAAAGAAAGAAAAAACAAAAAGTAA
GATAATTCTTTTGAAAACAAGAACATGTTTAAAAATGTCTTAATGCCTTT
TAATACTTACTTATTTTCGTGAACAAAAAAGGTTAAATTGTTATAATGAC
AAGAATACCCCTGTGTCACAGACCCGCTGGGAGCCCCACTAGAAAGATTG
ACAAAAATTTCGTCCCCGGTGGGAAAATACCTCAGAATTTCAGCCCACTT
GGAAATTCAATGCTTAAGAATTGCACAAAACCATTGCCACTGAATTTTTT
AACCTTGGAACAATAGAATTTCTATCCCCATTGGGATCTTAATAGGAATT
CTGAAGAAAAAGTTCCACCGGGGCTGTGAGACAGAGGTGTACAAGAAAAT
GATTTGTGTTTTCAGTCAGATTCTTCCCACGTTTTTTCCATGAGACAGGG
GTGTACTTTAGAAAAAAACGGAGGCTGTATTCCTGCAATACTTTCGCTAC
ACGTTTTTTTGTAAGGACATCCAAAGTTTTTGAAGCCTAAGGGTGTTCTT
AACTTTTAGTGCTTTAAGCCTAGAAATGTTCTTAACATGTTCTTATTTAC
ACCATTTTGTGAGCATTTTTGTCCATTTTCTTAAGAAATTGTGTGTTTTA
GAGTCTGCAAAGCCCAAAAATGTTCATAGCTTGTTCGTAATATTTTGACC
ATCGAAGCCTTATGTATGTTCTTATATAGTTTGTTCTAATAAAAAAACAT
GTATTTTTTTCTTTCTTGAGTCATGCATGTTTTTCGTTAATCCAACAAGT
GAAATATTAAGTGAAGGGTGAATTTAGTTACTTCCCTCCCTCTGATATTC
AAAATACAGCTCGACTAAAATTCTACGTATATCTCCTCTCGTTTTACAGA
AATTGCAACTGAGAAAAAAACAAAACCGATGGAGAGCGATCAACAAGCAG
GAGAAGGGTCTCCCCCACAGGTGCCAGACAAAGTTGAAGATATGGAGCCT
AAAGCAGAGATGGAAAGTGGAACGAAGCAAGGCGATGGAGAGGAAATGTC
GGTTGAGACATCAACACCAATCAATGAAAACCCTCAAACAGGAGAAACGA
AAGAGAACAAAAAAGAAAAAGACTCAGAGAGTCCTCCAAAAGACACTGCA
CAGAATGAAACAGATGTCAATAGAAATGTCCCTGAAGGTCAAGGCCAGAC
AGTACAAGATTCAGTGAATCCATTGCAAGGCACTACAGTTGCCACTAAGA
ATCACGATGAAGGTCTAGAACAATTAGAATCTGAGAAAATTACTAAAAAT
GACGAAGATGTGTCCAATGTCGTTGGTCAACTTGTGGAGAATGTTTCTCA
ATCAGAAACAGATATTCGAGTGAATGATGAACAACCTCAGAATAACGAAA
CTGAAACGAATGCTCAAACTAATGAAGAAGCTAGAGACGAAAATTTAGAA
GAAACAATTGATAAAAATGACGCAAAAGTAAGTGAAGAAGACCCACAAAT
CAACGAAAGCGAGTTGAAAGTTGCTGGTGGAAAAGAAACGAAAGACTCAG
AAACCATTGAACCATCGAACCATATTGTTAATGGTCAAAATGCCAACCTA
GATGAACGAAATACTGATTCTTCAACTGTTGAAGTAAATAAAAACGTGGA
TAATATCGAGGACAATGAAGCAGATAATGTTGGCAATGAGTCTAGATCAA
ATGAAGTGGACCACCAGACGAATCAGGTGGAGATCACTCAGAACAATGCT
TCGAATGGTGACTCCACCAAAGATGTAGTAGATTCAAATGAAAATAAAAC
TGTCCAATCTGATAACAAAGTATCGAATGATTATAACGGCAATGGTGATC
AGCACGATACTGATGAGATATCAGCGATGGTAAAACCTTTGAAAGTTGAT
AGTATTGATGATAATGGAGCAAATCAAACCTCACAAGACACAGGTGAAGC
CAATGAAGTTAAGAACAATGAAAATAAGTCTCAGGAAACTGTTAATATGA
TGTCCGAATCGACGAGCCAAGATGTCGATAAGGAGGACTTAATGGATGAC
ATTCTTAATACTGATGATGGACTCGTTGACCCAGACATTGATAATATTGA
GAAGTTAGATACAACAAAACTAAGCGAGGCAAAAGATAGTGACCTCATTA
GAATTAAAGACGATAGTCCGAATCTCTTCGATTCGAAAGAGCATGATCGA
ATATCGAAATCGTCGATTGCAGACGACATCGATCAATTCCTCGATGATGA
AGAGAACAATGATGATGAAGCAGCGGACGCGCTAACTGATCAATTGCTGA
CTCAGCAATTACCAAGTGAAACGAAACAATCGCCGAACGTCGAGGCACTG
GCCTATGAATCAGGTACGCTCCACATGTTTTTTTTGTAAGAACATTCAAC
ATTTTTGAAGGGGTGTTCTTATCTAATTTACTTTTATAAAAAAACGTGTA
TTTTCAGTCGATGATAGGCGAGTCCCAGAGTTTTAAAAGATTTTGAAAAA
AAAAAATTCAAAAAGTGTTCAAGATCGAGAAAAAATAAAAAAGTTTTCGC
CACTCGAGCCCCAAGTCTTTTGAAAAAAAACAAGTTAACAAGACATCGGT
TAAGGTAAAGGGACACCCTGAAACCTATTTTCTTACTATTTCTCAAATTG
TTCTCTTATCTTGTTCGATTTTCAGGGTAAAACATTTATTTAAGGTTTGA
TTTTGCTTAAAACGCAGCGAATCTCAGTCGTTCAAATCTCACCACTGCCC
TTAAATTGTTTTTGGCTTTTTTGAGCCTCATTGTTCTTATAAAAAAGAGA
GTCAAACATGAATCCCAGGAGGGGTACTAGGTTTGGGAGGTGACGGGTAT
GTCCGAGCGAAAATCGAAATCGACCTTTGAGAGACAAATTTGGTGCTTTG
GGACCCTGAGGACTTTTTCTAAATTTTGGTCATTTTTCCAATTTTGTTGA
TTTTCACCAATTTTGTCAAAATTCTTGGAAATCGTGCCCTTTGAGAGAGA
AATTTTGATTTTTGTGATTTTGGGACCCTTCAGAGATAACTTTAGAATTT
GTACCCCTTTGAGAGCTTTGAGGACTGAAAAATTACCCTATGGCTCGCAC
ATACCCGGCACTATTTGCCTAAGTACCCCCCACCGAAGTGAAATCATTGT
ATGAAAAGGCGAACATTCAAAAGTTTGTATCGATTTCGCCCAACACCCCC
TTCACAGCCCCGGTAGGATTTTTTCTGCCGTGGAATAAAAAATAACGGAC
TAAACTCGAGGGGATTGATAGTTCCAATAATTTTTTGGATTTGATTTCAT
CCTTCATTTTCGAGTAAGAAAATTCAGTGGGAGGGATTGTTGATTTGAAA
AAATGGAGTATAATTTTCCAACTGAGGCGATATTTTGGTAACTTTTCTAG
TGGGAAGGGGCCCAAGTGGGTCTTTATTATAAAAGAATTTACAGTTATAG
GCGCACGGTGGGCCTCTAAACCGGTCTGCTTACAATATCACGATTCGTTA
TTTACCTTGTTAAAGAATTTCTTGATAAGGTATTCAGATTTTGCTTTTCC
AATTTCAATCATCTTTTTCATTGTAGAATACTTGACACGAAAAGTTCAAG
AAGGAAGGAACAATGAAAAACATTTGAAAAGAGAAATTGATGACAAAGAT
CGGAAATTAGAAGATGCTGAACGCAAAATTAAAGACCTTCAAATACGACT
GATTAGGTAAGAGATATACCACAGCTGGCATGCATACAACGTTGTTTCAA
CGTTCATCTAACGTTATATATGAACATTAGATGAATGTCGAAACAACGTT
GTGTGTCAGCTGGGTCGAATTTGGAATCTATGCTAAATATTACATTCTAA
TGCTTTCTTTCAGATATTGTGTTTTTCTCAATCCTGAACATTGAATAAGT
TGGCTCCCTTTTATAAAACTTCTAATTTGTATCTGGCCATTGTTACCAAA
TCTGTCAAATTCTTTCTACCGCACCCCAGAAGTCACCTTCAAAAGTCGAG
TCGAAATGACTTGGGTTTATATGTTGAACTGTCCACCTACAAAAATATGA
TAGTATCATTTGCGAGGTGGAGTATATAAGATTACGTCATGTATCAAGAA
TTAACATTTTTCAGGTTCGCACGAGACGATGAAGCAAAGGATAAACACGT
GGCAACACTTGAAAAAGAAATGAAAGAAATCAATCGACGATTAGAAGAGG
TCTTGGACGAGCATCAAGAACGCATTGTTGCCCAGCAACAACATCAACAA
CAAAATGGCGGGAAAATCACACCAAAACAAAATGGCGGAATAGCTACACA
ACAGAACAATAAACAAAGGAACACTCAAAGAATGTAACTGACTCCAAAAC
ATGCGTTCTTTTATAACATAATATCTGGTCTTGAAATTTGTTGTCTTCAT
GACGTCGTTTCAACGTTCATCTAACGTTATATGGATTGTG Coding sequence (CDS) from alignment at sc0000090_pilon:1265547..1270036- >MSTRG.12169.1.p1 ID=MSTRG.12169.1.p1|Name=MSTRG.12169.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5175bp|location=Sequence derived from alignment at sc0000090_pilon:1265547..1270036- (Clytia hemisphaerica_ch_hm2_pilon)
GTTCGCACGAGACGATGAAGCAAAGGATAAACACGTGGCAACACTTGAAA
AAGAAATGAAAGAAATCAATCGACGATTAGAAGAGGTCTTGGACGAGCAT
CAAGAACGCATTGTTGCCCAGCAACAACATCAACAACAAAATGGCGGGAA
AATCACACCAAAACAAAATGGCGGAATAGCTACACAACAGAACAATAAAC
AAAGGAACACTCAAAGAATGTAAAATACTTGACACGAAAAGTTCAAGAAG
GAAGGAACAATGAAAAACATTTGAAAAGAGAAATTGATGACAAAGATCGG
AAATTAGAAGATGCTGAACGCAAAATTAAAGACCTTCAAATACGACTGAT
TAGATGGAGCCTAAAGCAGAGATGGAAAGTGGAACGAAGCAAGGCGATGG
AGAGGAAATGTCGGTTGAGACATCAACACCAATCAATGAAAACCCTCAAA
CAGGAGAAACGAAAGAGAACAAAAAAGAAAAAGACTCAGAGAGTCCTCCA
AAAGACACTGCACAGAATGAAACAGATGTCAATAGAAATGTCCCTGAAGG
TCAAGGCCAGACAGTACAAGATTCAGTGAATCCATTGCAAGGCACTACAG
TTGCCACTAAGAATCACGATGAAGGTCTAGAACAATTAGAATCTGAGAAA
ATTACTAAAAATGACGAAGATGTGTCCAATGTCGTTGGTCAACTTGTGGA
GAATGTTTCTCAATCAGAAACAGATATTCGAGTGAATGATGAACAACCTC
AGAATAACGAAACTGAAACGAATGCTCAAACTAATGAAGAAGCTAGAGAC
GAAAATTTAGAAGAAACAATTGATAAAAATGACGCAAAAGTAAGTGAAGA
AGACCCACAAATCAACGAAAGCGAGTTGAAAGTTGCTGGTGGAAAAGAAA
CGAAAGACTCAGAAACCATTGAACCATCGAACCATATTGTTAATGGTCAA
AATGCCAACCTAGATGAACGAAATACTGATTCTTCAACTGTTGAAGTAAA
TAAAAACGTGGATAATATCGAGGACAATGAAGCAGATAATGTTGGCAATG
AGTCTAGATCAAATGAAGTGGACCACCAGACGAATCAGGTGGAGATCACT
CAGAACAATGCTTCGAATGGTGACTCCACCAAAGATGTAGTAGATTCAAA
TGAAAATAAAACTGTCCAATCTGATAACAAAGTATCGAATGATTATAACG
GCAATGGTGATCAGCACGATACTGATGAGATATCAGCGATGGTAAAACCT
TTGAAAGTTGATAGTATTGATGATAATGGAGCAAATCAAACCTCACAAGA
CACAGGTGAAGCCAATGAAGTTAAGAACAATGAAAATAAGTCTCAGGAAA
CTGTTAATATGATGTCCGAATCGACGAGCCAAGATGTCGATAAGGAGGAC
TTAATGGATGACATTCTTAATACTGATGATGGACTCGTTGACCCAGACAT
TGATAATATTGAGAAGTTAGATACAACAAAACTAAGCGAGGCAAAAGATA
GTGACCTCATTAGAATTAAAGACGATAGTCCGAATCTCTTCGATTCGAAA
GAGCATGATCGAATATCGAAATCGTCGATTGCAGACGACATCGATCAATT
CCTCGATGATGAAGAGAACAATGATGATGAAGCAGCGGACGCGCTAACTG
ATCAATTGCTGACTCAGCAATTACCAAGTGAAACGAAACAATCGCCGAAC
GTCGAGGCACTGGCCTATGAATCAGGTTCGCACGAGACGATGAAGCAAAG
GATAAACACGTGGCAACACTTGAAAAAGAAATGAAAGAAATCAATCGACG
ATTAGAAGAGGTCTTGGACGAGCATCAAGAACGCATTGTTGCCCAGCAAC
AACATCAACAACAAAATGGCGGGAAAATCACACCAAAACAAAATGGCGGA
ATAGCTACACAACAGAACAATAAACAAAGGAACACTCAAAGAATGTAAAA
TACTTGACACGAAAAGTTCAAGAAGGAAGGAACAATGAAAAACATTTGAA
AAGAGAAATTGATGACAAAGATCGGAAATTAGAAGATGCTGAACGCAAAA
TTAAAGACCTTCAAATACGACTGATTAGATGGAGCCTAAAGCAGAGATGG
AAAGTGGAACGAAGCAAGGCGATGGAGAGGAAATGTCGGTTGAGACATCA
ACACCAATCAATGAAAACCCTCAAACAGGAGAAACGAAAGAGAACAAAAA
AGAAAAAGACTCAGAGAGTCCTCCAAAAGACACTGCACAGAATGAAACAG
ATGTCAATAGAAATGTCCCTGAAGGTCAAGGCCAGACAGTACAAGATTCA
GTGAATCCATTGCAAGGCACTACAGTTGCCACTAAGAATCACGATGAAGG
TCTAGAACAATTAGAATCTGAGAAAATTACTAAAAATGACGAAGATGTGT
CCAATGTCGTTGGTCAACTTGTGGAGAATGTTTCTCAATCAGAAACAGAT
ATTCGAGTGAATGATGAACAACCTCAGAATAACGAAACTGAAACGAATGC
TCAAACTAATGAAGAAGCTAGAGACGAAAATTTAGAAGAAACAATTGATA
AAAATGACGCAAAAGTAAGTGAAGAAGACCCACAAATCAACGAAAGCGAG
TTGAAAGTTGCTGGTGGAAAAGAAACGAAAGACTCAGAAACCATTGAACC
ATCGAACCATATTGTTAATGGTCAAAATGCCAACCTAGATGAACGAAATA
CTGATTCTTCAACTGTTGAAGTAAATAAAAACGTGGATAATATCGAGGAC
AATGAAGCAGATAATGTTGGCAATGAGTCTAGATCAAATGAAGTGGACCA
CCAGACGAATCAGGTGGAGATCACTCAGAACAATGCTTCGAATGGTGACT
CCACCAAAGATGTAGTAGATTCAAATGAAAATAAAACTGTCCAATCTGAT
AACAAAGTATCGAATGATTATAACGGCAATGGTGATCAGCACGATACTGA
TGAGATATCAGCGATGGTAAAACCTTTGAAAGTTGATAGTATTGATGATA
ATGGAGCAAATCAAACCTCACAAGACACAGGTGAAGCCAATGAAGTTAAG
AACAATGAAAATAAGTCTCAGGAAACTGTTAATATGATGTCCGAATCGAC
GAGCCAAGATGTCGATAAGGAGGACTTAATGGATGACATTCTTAATACTG
ATGATGGACTCGTTGACCCAGACATTGATAATATTGAGAAGTTAGATACA
ACAAAACTAAGCGAGGCAAAAGATAGTGACCTCATTAGAATTAAAGACGA
TAGTCCGAATCTCTTCGATTCGAAAGAGCATGATCGAATATCGAAATCGT
CGATTGCAGACGACATCGATCAATTCCTCGATGATGAAGAGAACAATGAT
GATGAAGCAGCGGACGCGCTAACTGATCAATTGCTGACTCAGCAATTACC
AAGTGAAACGAAACAATCGCCGAACGTCGAGGCACTGGCCTATGAATCAG
GTTCGCACGAGACGATGAAGCAAAGGATAAACACGTGGCAACACTTGAAA
AAGAAATGAAAGAAATCAATCGACGATTAGAAGAGGTCTTGGACGAGCAT
CAAGAACGCATTGTTGCCCAGCAACAACATCAACAACAAAATGGCGGGAA
AATCACACCAAAACAAAATGGCGGAATAGCTACACAACAGAACAATAAAC
AAAGGAACACTCAAAGAATGTAAAATACTTGACACGAAAAGTTCAAGAAG
GAAGGAACAATGAAAAACATTTGAAAAGAGAAATTGATGACAAAGATCGG
AAATTAGAAGATGCTGAACGCAAAATTAAAGACCTTCAAATACGACTGAT
TAGATGGAGCCTAAAGCAGAGATGGAAAGTGGAACGAAGCAAGGCGATGG
AGAGGAAATGTCGGTTGAGACATCAACACCAATCAATGAAAACCCTCAAA
CAGGAGAAACGAAAGAGAACAAAAAAGAAAAAGACTCAGAGAGTCCTCCA
AAAGACACTGCACAGAATGAAACAGATGTCAATAGAAATGTCCCTGAAGG
TCAAGGCCAGACAGTACAAGATTCAGTGAATCCATTGCAAGGCACTACAG
TTGCCACTAAGAATCACGATGAAGGTCTAGAACAATTAGAATCTGAGAAA
ATTACTAAAAATGACGAAGATGTGTCCAATGTCGTTGGTCAACTTGTGGA
GAATGTTTCTCAATCAGAAACAGATATTCGAGTGAATGATGAACAACCTC
AGAATAACGAAACTGAAACGAATGCTCAAACTAATGAAGAAGCTAGAGAC
GAAAATTTAGAAGAAACAATTGATAAAAATGACGCAAAAGTAAGTGAAGA
AGACCCACAAATCAACGAAAGCGAGTTGAAAGTTGCTGGTGGAAAAGAAA
CGAAAGACTCAGAAACCATTGAACCATCGAACCATATTGTTAATGGTCAA
AATGCCAACCTAGATGAACGAAATACTGATTCTTCAACTGTTGAAGTAAA
TAAAAACGTGGATAATATCGAGGACAATGAAGCAGATAATGTTGGCAATG
AGTCTAGATCAAATGAAGTGGACCACCAGACGAATCAGGTGGAGATCACT
CAGAACAATGCTTCGAATGGTGACTCCACCAAAGATGTAGTAGATTCAAA
TGAAAATAAAACTGTCCAATCTGATAACAAAGTATCGAATGATTATAACG
GCAATGGTGATCAGCACGATACTGATGAGATATCAGCGATGGTAAAACCT
TTGAAAGTTGATAGTATTGATGATAATGGAGCAAATCAAACCTCACAAGA
CACAGGTGAAGCCAATGAAGTTAAGAACAATGAAAATAAGTCTCAGGAAA
CTGTTAATATGATGTCCGAATCGACGAGCCAAGATGTCGATAAGGAGGAC
TTAATGGATGACATTCTTAATACTGATGATGGACTCGTTGACCCAGACAT
TGATAATATTGAGAAGTTAGATACAACAAAACTAAGCGAGGCAAAAGATA
GTGACCTCATTAGAATTAAAGACGATAGTCCGAATCTCTTCGATTCGAAA
GAGCATGATCGAATATCGAAATCGTCGATTGCAGACGACATCGATCAATT
CCTCGATGATGAAGAGAACAATGATGATGAAGCAGCGGACGCGCTAACTG
ATCAATTGCTGACTCAGCAATTACCAAGTGAAACGAAACAATCGCCGAAC
GTCGAGGCACTGGCCTATGAATCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000090_pilon | genome | sc0000090_pilon:1265547..1270036 - |
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