MSTRG.12160.2.p1 (mRNA) -

Overview
NameMSTRG.12160.2.p1
Unique NameMSTRG.12160.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000090_pilon:1000699..1002297+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12160.2.p1 ID=MSTRG.12160.2.p1|Name=MSTRG.12160.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1599bp|location=Sequence derived from alignment at sc0000090_pilon:1000699..1002297+ (Clytia hemisphaerica_ch_hm2_pilon)
CCCGataaatatatttctaaatatttctcaataatactcataacgaaata ataaactacataaaaatTTAAGTGCCTTTTTAAATGTCTGTTCAATCAAG TGTCTCCGTTATCTTTGGTCCAATTAAAATTGATGGTAACCTCTATAATC GGcaccgaaatatttggcactaAAGGGGAATTCACTCTAAAGTTTAAAAC CCCAAGTGATTactaagtgctttaaagtacggttagaaagtagagtttta actcagAATTTTGACATTATACTTAAGGCTTAGGAGGACCTTAAGATCTC AGGATCGAAAAAAGCTGAGAATaaagcctggaagccacttaacccctccc aaatcgaaaaatctcctgaaacaaagtggaagtactgaaattgcaattct cgcccgagctttaaattctggaaaacatgaaaatacccaaaattgccaat atatttcggcacgGATCGTAGTCATGCCTGTTAATTATAAATATGTACAT TTTAGTCAAAAATTTCACGATcattttttaagtctcttttAGCAGGTTAA ATCCAATTATGTTGATTGCTCCAAAAAGTCTTGAttagaaaatatttgag aaaaataatctCCGATTGCACATCATTGGGAAGAATTGGTTGCGAAGTAA GGGAGGTGACCAAGAAGCGAATCGTCCTTTAATTCATATTGTCTTCAGTC TTGTTTATAATGACATATTCTTGCTAGGTTGCTGTTATTCCATTCGTTAA TAGTAAAATATTCGACAATTTTTCAGCTTACGTTATAATGAATACTGTAG TTCGCGTTTTGAACCAGTCACAGTTTTTTAAGGTTCCAAATATTCGATTC ATCCGTCCGGAAACGTCATTCTATGCCGTCATGTCACGTCACGTCATGGT AGGTATAGATAGTTCAACGTTTAACGTCTGGTGAAAACAGGTAAATTCGT TGACGTCAAGGCGTATCGTTCCCGTCAAATCAATGTATGTGTTGGTATGC GTCACGTCACGTCAAATCAATGTATACGTTGGTATGCGTTACGTCAAATC AATGTATGCGTTGGTATGGGTCCCGTTACGTCAAGTCAATGTATACGTTG GTATGCATTACGTCAAATCAATGTATGCGTTGGTATGCGTTACGTCGCGT CACGCCAATGTATACGTTGGTATGCGTTACGTCAAATCAATGTATGCTTT GGTATGCGTCACGTCACGTCAAGTCAATGTATACGTTGGTATGCGTTACG TCAAATCAATGTATGCGTTGGTATGCGTCACGTCACGTCAAGTCAATGTA TACGTTGGTATGCGTTACGTCACGTCACGTCAATGTATACGTTGGTATGC GTTACGTCAAATCAATGTATGCTTTGGTATGCGTCACGTCACGTCACGTC AATGTATACGTTGGTATGCGTTACGTCAAATCAATGTATGCTTTGGTATG CGTCACGTCACGTCAAGTCAATGTATACGTTGGTATGCGTTACATCAAAT CAATGTATGCGTTGGTATGCGTCACGTCACGTCAATGTATACGTTGGTAT ACGTTACGTCAAAACACTTCAAACCACGTCACGACGTCTCCCCGTCCAA

Coding sequence (CDS) from alignment at sc0000090_pilon:1000699..1002297+

>MSTRG.12160.2.p1 ID=MSTRG.12160.2.p1|Name=MSTRG.12160.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=894bp|location=Sequence derived from alignment at sc0000090_pilon:1000699..1002297+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATGTGTTGGTATGCGTCACGTCACGTCAAATCAATGTATACGTTGG
TATGCGTTACGTCAAATCAATGTATGCGTTGGTATGGGTCCCGTTACGTC
AAGTCAATGTATACGTTGGTATGCATTACGTCAAATCAATGTATGCGTTG
GTATGCGTTACGTCGCGTCACGCCAATGTATACGTTGGTATGCGTTACGT
CAAATCAATGTATGCTTTGGTATGCGTCACGTCACGTCAAGTCAATGTAT
ACGTTGGTATGCGTTACGTCAAATCAATGTATGCGTTGGTATGCGTCACG
TCACGTCAAGTCAATGTATACGTTGGTATGCGTTACGTCACGTCACGTCA
ATGTATACGTTGGTATGCGTTACGTCAAGTCAATGTATACGTTGGTATAC
GTTACGTCAAAACACTTCAAACCACGTCACGACGTCTCCCCGTCCAAATG
TATGTGTTGGTATGCGTCACGTCACGTCAAATCAATGTATACGTTGGTAT
GCGTTACGTCAAATCAATGTATGCGTTGGTATGGGTCCCGTTACGTCAAG
TCAATGTATACGTTGGTATGCATTACGTCAAATCAATGTATGCGTTGGTA
TGCGTTACGTCGCGTCACGCCAATGTATACGTTGGTATGCGTTACGTCAA
ATCAATGTATGCTTTGGTATGCGTCACGTCACGTCAAGTCAATGTATACG
TTGGTATGCGTTACGTCAAATCAATGTATGCGTTGGTATGCGTCACGTCA
CGTCAAGTCAATGTATACGTTGGTATGCGTTACGTCACGTCACGTCAATG
TATACGTTGGTATGCGTTACGTCAAGTCAATGTATACGTTGGTATACGTT
ACGTCAAAACACTTCAAACCACGTCACGACGTCTCCCCGTCCAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12160MSTRG.12160Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12160.2.p1.exon1MSTRG.12160.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12160.2.p1.exon2MSTRG.12160.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12160.2.p1MSTRG.12160.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000090_pilongenomesc0000090_pilon:1000699..1002297 +