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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000090_pilon:16638..19930+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12103.1.p1 ID=MSTRG.12103.1.p1|Name=MSTRG.12103.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3293bp|location=Sequence derived from alignment at sc0000090_pilon:16638..19930+ (Clytia hemisphaerica_ch_hm2_pilon)
CCCAATCGggttttccttattttcaactttttcccgcttcttcccGATTT
GGAAGTCCGTTTTTAAACTCTTGCCCATTCTTCCTGAACGGGAAGCCTTG
AAGCCTCGCATGTTTTTAATTCCACCGCGCTGCCTGCTGCTCAACCAcca
gattttgaattttgattgaaactAAGCAATGGATTGCAACAACtttgaag
aagaagaaccaAACATGGAAGAAACACAAAATCAAAGTATGTATCTTCTA
TCGAGTCTGTTATTTTTGTCTACTCCACTGCTGTTTTGGAGGCAATGCTT
TACATTTTCCCTCCCTTCATGCAAGCTTatctatgtttttattttatcaa
gtCCAAGTCAGTGGGACTAGTCTAAAATTCTACTATATGTATCTAGtcga
aaaattgaatcattgaAGCTAATCAAAACAATCAGTTTTTTGATTTACTC
AAATTCATCGAAGTACGAAGACTAATCAGTTTGAGATCTGAAAAAGATTG
GATTGATTAATTAGATCGAGCtttgattgcttcgattacggtTTGATTAC
AGTTTGATGACTACTCTTTGCATATGCTTTCCAAGCTTAAAgttatcgaa
ctaatcgaacaatGAAGAAAAGAGAGGCTGCAAactgttttttaatttta
atttcaaaattttgtaagcTACACATGCATACTTTTCCAACACAATGGTT
GTGAGCAGCTAAGCAAGTTTAATCGATAGCTAAAATTAATATTAACCGTT
TGATTAGACATCGATTGGAATCAATAATCAATACCGtgataccgtgaagt
cgggtaacttgcatcagtggagggtgGAGGTAACTCTAGTTGAGATACAA
ATATATCATTTCCCTCTTGCCAGTAAGAGGGTTTTTGGTTCAAATGACCA
TCTAATCCTAAGGTTTCCGTCTATATTGACATAACCTAGTTGCAACACTG
AATAATTGAGTTATCAATTAAAATAGTTGATACAATCAATACCAATAGGT
AATCAATACTTTaatcaatattcaaaattttttttaccttgatTAGCTAT
TGATTATTGACTCTAATCAATATCTAATTGATTGATTAATATTGATTAGC
TCTCTAATAAAACTGATGATTGATTTTATCGATTCTAAAGATACATAAGC
CTGGGTTTACAAACTTGAAATTAAGATCAGACTGTAAACacagattttta
tcaaaatcaatgATATATTACAGCCTGGCAGTCTCATAATCTTGCTCTTT
CCACAATTTCATTTGATATCCTTGCTTGATGGAGGAGAACCTACAATAGA
TTCAAGTTTCCATAGCTGAGCTCTATTTATATTGACCCTCACCCATAGAC
TAAAAGTAGTTTAAAGTCATAAAAGTTAATTACTCCTCTATGTACTCCCA
AGTTGGGGAATTTCAAATCACTCTTGATCAATTACATTTATGATAATCTA
AGCAGAAACAAGTTAGGTAAGGAAGCTTGAATCTTGAACGAGCAAGATAA
AGAGACTgcctggatacccaggctaactggaaatttaaatttattgcTGT
TTTATTTTAAGCTCAACAAGTTATGGAAATCACACCAGAACAAATGGGTC
TCTTATACCAATTGGTGCAACAAGACCCTCGGTTTCAATCACATGAAAAC
GTTACCCTTTTGCAACCTCTCATCCCTCAGCAGCAACCTAACAAAAATTC
CAGTAATATGTCTTATGGAGAAACATCAGAAGATTATTCAGCTAATACTA
GTAGTAACCTATCAGTCTTGGCAGACGCCTCACGCTTATTCCAAGAACCT
CTTGCAAGTCAGCCATCAACAGATACTATAAAGGTGAGCTCTTAAGTTTA
TCAGGTCAACAGCTTCGTCTCATTTTACTTGATGTTGATgcttttttaat
ttgaacaGTAAGcagcatttcaacttttctgtCAGTTGACAGAAATTTGT
TTACTTGAATTTCTAACAAGGGTTTCTCTTATTTTAGCAATTTTGAGTAG
TGGAATTTGTTATATAATTCTTTTATTAACCAGGTTAGACCATGTTGTAC
tgggtaaatgttttttctagATTGCTCAAAGGAAGCAACTGCAAGGGAGC
ATTGCATAATGATATATTAAACTATtgcatttttcagtattttaaaaACT
GACTTTAAATCCTCATTGTTTATTGTAAAAAACTCAAATATGTTCTTGTA
TAATTCAAAGATAAATTTGCATACATTACTATGTACCACTTATTTTTCAG
ATTATTACTGTTAAACAATTAGGAAATGGAACCTGAATGAACCCAATACC
CTGTATATTCATTATCCCAATATCCCAACCCGAAGACCCAAACACCCGAA
GACATGGTACTGTAACCCTGATTTCCTGTTGTATGTATTGTATGTCCAAA
TCCTGGTTATCATatatttctgaaaagaaaaatgtagTTTTAGGGGAAAT
CAAAGgagaaaataatataatttagGGTCATCTTATCTTCTTacattctt
tttgaaaacaggtcaaataaattttaagcaaataaaTGGGTAATTCAAAC
TACATTTTGGGAAATTTGTATTATTATTAGTTAATTGCATGCATCTCATC
TTCTGTAATTCAAAGAgctttttttgagaaatcatGAATAGAGCTAATGC
ATGCAATGTTTAGCTGACCATGTGCTCTTACtggtcatatttttttattg
attcaTTGCATTGTCTTTATTCTAGACCCCTCCGAATCATCACAAGGGAC
CCATCAGGATTCAATACGAAACTGAACCTAAAAGGCGTGGCACTGCATAC
GCGAAGCGGTCAGCAACCTTGAAGCAAAAAGTAAGGTCCACTCGTTTTAG
TTTGGAGATTGTTGTTTCAAAGCAGATATCCCTAAAGGGACTCGCATTTG
AATTTTTGGCACTTGATAACTCGGTGATATATTActcagtttttgttttt
tatttcacatACTTGCTAATTGTACTTCTAGAAACCCCAGATTATGGCAA
ATAAAGGCTAAATCAGGATATTTAGTGTAAAATAAGGGACATAGTTTGCA
AAAATAGGAAGAAGTAAGATTTATTGGAACCAAAACTTTTTGGTCATGTT
GACATTCATTACCACCCCCCCCCAGTTTTTTTTGGCAAATCTTAGTTACA
AGATACAACCTTCCACTTTTCATTCTTTCTGATTTTTGTTCTAGGCGCAT
GAGCTCAATGTGATTACTGGCGCAAAAGTGAGATTATTGATCAATAGTAA
TGATTCCAATGATGAGAAGAGTTACGGGATGCCCGTAACTGCT Coding sequence (CDS) from alignment at sc0000090_pilon:16638..19930+ >MSTRG.12103.1.p1 ID=MSTRG.12103.1.p1|Name=MSTRG.12103.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2136bp|location=Sequence derived from alignment at sc0000090_pilon:16638..19930+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTGCAACAACtttgaagaagaagaaccaAACATGGAAGAAACACA
AAATCAAACTCAACAAGTTATGGAAATCACACCAGAACAAATGGGTCTCT
TATACCAATTGGTGCAACAAGACCCTCGGTTTCAATCACATGAAAACGTT
ACCCTTTTGCAACCTCTCATCCCTCAGCAGCAACCTAACAAAAATTCCAG
TAATATGTCTTATGGAGAAACATCAGAAGATTATTCAGCTAATACTAGTA
GTAACCTATCAGTCTTGGCAGACGCCTCACGCTTATTCCAAGAACCTCTT
GCAAGTCAGCCATCAACAGATACTATAAAGACCCCTCCGAATCATCACAA
GGGACCCATCAGGATTCAATACGAAACTGAACCTAAAAGGCGTGGCACTG
CATACGCGAAGCGGTCAGCAACCTTGAAGCAAAAAGCGCATGAGCTCAAT
GTGATTACTGGCGCAAAAGTGAGATTATTGATCAATAGTAATGATTCCAA
TGATGAGAAGAGTTACGGGATGCCCGTAACTGCTATGGATTGCAACAACt
ttgaagaagaagaaccaAACATGGAAGAAACACAAAATCAAACTCAACAA
GTTATGGAAATCACACCAGAACAAATGGGTCTCTTATACCAATTGGTGCA
ACAAGACCCTCGGTTTCAATCACATGAAAACGTTACCCTTTTGCAACCTC
TCATCCCTCAGCAGCAACCTAACAAAAATTCCAGTAATATGTCTTATGGA
GAAACATCAGAAGATTATTCAGCTAATACTAGTAGTAACCTATCAGTCTT
GGCAGACGCCTCACGCTTATTCCAAGAACCTCTTGCAAGTCAGCCATCAA
CAGATACTATAAAGACCCCTCCGAATCATCACAAGGGACCCATCAGGATT
CAATACGAAACTGAACCTAAAAGGCGTGGCACTGCATACGCGAAGCGGTC
AGCAACCTTGAAGCAAAAAGCGCATGAGCTCAATGTGATTACTGGCGCAA
AAGTGAGATTATTGATCAATAGTAATGATTCCAATGATGAGAAGAGTTAC
GGGATGCCCGTAACTGCTATGGATTGCAACAACtttgaagaagaagaacc
aAACATGGAAGAAACACAAAATCAAACTCAACAAGTTATGGAAATCACAC
CAGAACAAATGGGTCTCTTATACCAATTGGTGCAACAAGACCCTCGGTTT
CAATCACATGAAAACGTTACCCTTTTGCAACCTCTCATCCCTCAGCAGCA
ACCTAACAAAAATTCCAGTAATATGTCTTATGGAGAAACATCAGAAGATT
ATTCAGCTAATACTAGTAGTAACCTATCAGTCTTGGCAGACGCCTCACGC
TTATTCCAAGAACCTCTTGCAAGTCAGCCATCAACAGATACTATAAAGAC
CCCTCCGAATCATCACAAGGGACCCATCAGGATTCAATACGAAACTGAAC
CTAAAAGGCGTGGCACTGCATACGCGAAGCGGTCAGCAACCTTGAAGCAA
AAAGCGCATGAGCTCAATGTGATTACTGGCGCAAAAGTGAGATTATTGAT
CAATAGTAATGATTCCAATGATGAGAAGAGTTACGGGATGCCCGTAACTG
CTATGGATTGCAACAACtttgaagaagaagaaccaAACATGGAAGAAACA
CAAAATCAAACTCAACAAGTTATGGAAATCACACCAGAACAAATGGGTCT
CTTATACCAATTGGTGCAACAAGACCCTCGGTTTCAATCACATGAAAACG
TTACCCTTTTGCAACCTCTCATCCCTCAGCAGCAACCTAACAAAAATTCC
AGTAATATGTCTTATGGAGAAACATCAGAAGATTATTCAGCTAATACTAG
TAGTAACCTATCAGTCTTGGCAGACGCCTCACGCTTATTCCAAGAACCTC
TTGCAAGTCAGCCATCAACAGATACTATAAAGACCCCTCCGAATCATCAC
AAGGGACCCATCAGGATTCAATACGAAACTGAACCTAAAAGGCGTGGCAC
TGCATACGCGAAGCGGTCAGCAACCTTGAAGCAAAAAGCGCATGAGCTCA
ATGTGATTACTGGCGCAAAAGTGAGATTATTGATCAATAGTAATGATTCC
AATGATGAGAAGAGTTACGGGATGCCCGTAACTGCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000090_pilon | genome | sc0000090_pilon:16638..19930 + |
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