MSTRG.11918.13.p1 (mRNA) -

Overview
NameMSTRG.11918.13.p1
Unique NameMSTRG.11918.13.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000088_pilon:279490..281594-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11918.13.p1 ID=MSTRG.11918.13.p1|Name=MSTRG.11918.13.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2105bp|location=Sequence derived from alignment at sc0000088_pilon:279490..281594- (Clytia hemisphaerica_ch_hm2_pilon)
ACAAACTGACGTATTTGTAAACTTTTTTAATCTCTACCAATTTTGAACAG
AGCAGTTCATATCATCAATCTTAAGTCGGCGTGTGAGAGAAAGTTGATGT
CAAAATCTTTATTGGATTTTTGTTGTAAATCAGTTCAAGGCTTCACTCAC
TGTGCTGAATTTTTGTTATGTTTTGAAATCAAGAGAAAGAGAAAGTTATT
TCATGCTGAAAACTTGCTAAGAAACAGGAAAAGTTTTGCTGGTTATGTCA
AAATTGCACTTTCCATTTAAGTTATGGTAATTGAAAGTTGTTGATGTCAT
TTTAAATTCCTGGAAGAAAGAAATTTGGTGATACCCACAATAAGTGTTGT
ATTTTTGTCAGTAAGGTCAATACGTTGTTTTTTGTTTTCGGTGGTGGAAC
GGTAGTTTAGTTTTGATGAGAAAAGTTGTGTACTTGACCTCTGTAAATCC
TTAAGGTGAGGTGTTTGGTACAAGCTCAATCAATATTTTTAATTTTATTC
CTTTAAGAGATAAATAACTCCTCTTGTATTATACATTTGGGAAGTAAGCA
ATTCGATACATACACCCTGTAAGGGGTTATAACGTTGTAAAACTCGAGCC
TCTTCATGTCCATATTAAAGGAGTCGAATTATGGAAGATTTGCCGAATGA
TACTCTATAATTCGAACTTGAACGGGATATCTTATTTGTTCGAATTACAG
AGATATTCGGATAGTAGAAAGTTTCTCCTTGTGTCTGGGACTGGGACATA
AGTTCGAATAAGGGAGTCTACTGTCTACTGTATAAAAATGTCAAATTTTG
TTGCTTTTTATTTTGTAGATTTGCACCAAGCTGTGTTATCAAAAGAAGAG
ATGACGGTTTTCCAAGTCAGTGGTGCTCTTCAATCGCACGAGAGTTACAT
CCGCATCATGACAGCCATCAATCATGCCGGACTTGAGCTCTACTTCAAAG
CGTTCCATCACAGGGACGAACTACCCGGTGGTCTTGGTCTTCCAACAGAA
CCGGAAAAACTTTACAAGCATCTACAAAAACATCAATCTGAATTTGACGA
CCTTCGCTCCAAAGGACAAATCACTGAAAGAGAGTATCTAACCATTTTCC
CAGCTGGCAAGAAAGAGACTTATTCTCAGGAATTCTCATTCCCGCTTTTC
CAAAAATTGTTACAAATGTTTGACCGAGCAGGACTTGATGCGGAAACAGC
AAACTCGGATGACGAGCGAAACGTATTTTTGCAAGAAATGTCGAAATTTG
AATACATATTGAAAGATAAGAAACTGGTCAAAAAGATTAACAATTCTGAT
GAGACTTTCAATGAAATTTGGGATGACGTCATTCAGATCTTGAAAAATGT
CAAATATGATATAACACGAATCGAATCCTTACGAACAAGCGATCTAGAAG
AAAATAATAAATTCCGATTCGCTCTCTTAAAATCCGAAGTCAACGCTTTA
TTGTGGGAATGTGATGATTGTTTCAAGACTGTCAAAATGAACCATCTAGC
CTTGGATCGCCTCAAAGGGAACTTCCAGGCTGCACTCTCTGAAGTCAAAA
CAGAAAATAACAACGCTAAAACAGCTAACGAGTTAAAAGAACTGAATACA
GTCACAGATGAACTTCAAAAATCTGAAAATAAAATCATGGTTCAAAAACA
ACAGCTAAACGAAATTGTTCCAAATATTAAATTTTGGCGGGAAAAGAACA
TTGAAGGTGACGTCATCATTTGTGACGAGAACATTTCGAAATTGAGACAT
GAAGTAAATGAACAGACCAGACGAGTCGGTGATTTGTTCAACACCGTATC
TTTCGATATCATTCACCTGAAGGAGCGAGCATACAGTGCGACTGGAGAAG
CTAAAAACATCGGACTTCCTTTACATAAATCGCATTGAGTTTTGCGACTG
TTTCAGATTTTTTTTTTTGTACATATTATTAAGGTCTATTATCTTTATAT
TTATTATTTTAATGCAAGTTTTATTTTTAATTTGTTCTAGGTCTTTCAAT
TGATTATTCCGAAATTGATGCTGAATATTTTGGGAACTTTTTTGGATTGA
CCGGTTGAACCTTTAGTCTTTTGCTTTATTGATTTCAGAAAAAAATAAAA
GATAG

Coding sequence (CDS) from alignment at sc0000088_pilon:279490..281594-

>MSTRG.11918.13.p1 ID=MSTRG.11918.13.p1|Name=MSTRG.11918.13.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1038bp|location=Sequence derived from alignment at sc0000088_pilon:279490..281594- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGGTTTTCCAAGTCAGTGGTGCTCTTCAATCGCACGAGAGTTACAT
CCGCATCATGACAGCCATCAATCATGCCGGACTTGAGCTCTACTTCAAAG
CGTTCCATCACAGGGACGAACTACCCGGTGGTCTTGGTCTTCCAACAGAA
CCGGAAAAACTTTACAAGCATCTACAAAAACATCAATCTGAATTTGACGA
CCTTCGCTCCAAAGGACAAATCACTGAAAGAGAGTATCTAACCATTTTCC
CAGCTGGCAAGAAAGAGACTTATTCTCAGGAATTCTCATTCCCGCTTTTC
CAAAAATTGTTACAAATGTTTGACCGAGCAGGACTTGATGCGGAAACAGC
AAACTCGGATGACGAGCGAAACGTATTTTTGCAAGAAATGTCGAAATTTG
AATACATATTGAAAGATAAGAAACTGGTCAAAAAGATTAACAATTCTGAT
GAGACTTTCAATGAAATTTGGGATGACGTCATTCAGATCTTGAAAAATGT
CAAATATGATATAACACGAATCGAATCCTTACGAACAAGCGATCTAGAAG
AAAATAATAAATTCCGATTCGCTCTCTTAAAATCCGAAGTCAACGCTTTA
TTGTGGGAATGTGATGATTGTTTCAAGACTGTCAAAATGAACCATCTAGC
CTTGGATCGCCTCAAAGGGAACTTCCAGGCTGCACTCTCTGAAGTCAAAA
CAGAAAATAACAACGCTAAAACAGCTAACGAGTTAAAAGAACTGAATACA
GTCACAGATGAACTTCAAAAATCTGAAAATAAAATCATGGTTCAAAAACA
ACAGCTAAACGAAATTGTTCCAAATATTAAATTTTGGCGGGAAAAGAACA
TTGAAGGTGACGTCATCATTTGTGACGAGAACATTTCGAAATTGAGACAT
GAAGTAAATGAACAGACCAGACGAGTCGGTGATTTGTTCAACACCGTATC
TTTCGATATCATTCACCTGAAGGAGCGAGCATACAGTGCGACTGGAGAAG
CTAAAAACATCGGACTTCCTTTACATAAATCGCATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11918MSTRG.11918Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11918.13.p1MSTRG.11918.13.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11918.13.p1.exon2MSTRG.11918.13.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11918.13.p1.exon1MSTRG.11918.13.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088_pilongenomesc0000088_pilon:279490..281594 -