MSTRG.11883.6.p1 (mRNA) -

Overview
NameMSTRG.11883.6.p1
Unique NameMSTRG.11883.6.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000087_pilon:1226340..1227175+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11883.6.p1 ID=MSTRG.11883.6.p1|Name=MSTRG.11883.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=836bp|location=Sequence derived from alignment at sc0000087_pilon:1226340..1227175+ (Clytia hemisphaerica_ch_hm2_pilon)
gtagatctttttctctggtgtctgactttggtttgttttagttttgattg
tttttcttttacttttcttatGTGCTTTGACCTAGTTAAAATGTACTATT
TAACAATGGGAACTTAGGGAGTCTTCTTTTCAAGATTCTTTATTTATTAA
GTGATACAAATTTGGGCATGGTTGAACCTTTGGGCGTGGCCCTAGCATGT
GCTGTATATGTAGCGAAACGAATATTATAATTAAATAGCTTGTATTTCAG
TGATTTCCATTATTTCATTGTCGACTACGAAAACATTtaggaaaatatca
aaacatctTTTCATGGAGAAAAGCCTTGCTCTAAATCTAATATAAACTta
ggaaaaactgtttttggcTCCTGTCTGAACCTTTTTGCAATGCTTTACAC
GTCTCGTAGTTAATTTCAGTAACAACTTTCAAGAtgtgaaaagaaaaaac
tttgacAATTTATGTTTTTGTTCGTTCTCAGGAGCAGAAGAAATGGTTGC
CACAAAGAAATCACAAACTACACTCTGGATTTATTTGTATCGTTGTTCGA
AACTCGGGCCTCGTTCTTTATGGATCAAACAATCGAATTGTGTCTTAGAA
GAACTAACCAGAACGATATGCGATAAAGCGATTCGTCATCGAATGACAAA
AGCCTCTATCGATCATTCTCCGATCAAAAGTCCGAAACTTTACGAAACGC
CGTCCGAGAAAACAATGCAATGCGTAAAAGATATGATTGATTTGATAGTC
TCTTCACATCCGGAACTCTATACGGAAATCACATTCAAGTTAAACATACC
GGTTCAAGACGAGCGGACTGTATGTAGAACGTATAG

Coding sequence (CDS) from alignment at sc0000087_pilon:1226340..1227175+

>MSTRG.11883.6.p1 ID=MSTRG.11883.6.p1|Name=MSTRG.11883.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=342bp|location=Sequence derived from alignment at sc0000087_pilon:1226340..1227175+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTGCCACAAAGAAATCACAAACTACACTCTGGATTTATTTGTATCG
TTGTTCGAAACTCGGGCCTCGTTCTTTATGGATCAAACAATCGAATTGTG
TCTTAGAAGAACTAACCAGAACGATATGCGATAAAGCGATTCGTCATCGA
ATGACAAAAGCCTCTATCGATCATTCTCCGATCAAAAGTCCGAAACTTTA
CGAAACGCCGTCCGAGAAAACAATGCAATGCGTAAAAGATATGATTGATT
TGATAGTCTCTTCACATCCGGAACTCTATACGGAAATCACATTCAAGTTA
AACATACCGGTTCAAGACGAGCGGACTGTATGTAGAACGTAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11883MSTRG.11883Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11883.6.p1.exon1MSTRG.11883.6.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11883.6.p1.exon2MSTRG.11883.6.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11883.6.p1MSTRG.11883.6.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087_pilongenomesc0000087_pilon:1226340..1227175 +