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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000087_pilon:898483..901249- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11860.1.p1 ID=MSTRG.11860.1.p1|Name=MSTRG.11860.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2767bp|location=Sequence derived from alignment at sc0000087_pilon:898483..901249- (Clytia hemisphaerica_ch_hm2_pilon)
TTCGTATTTTCATATCCTGTGACATAACAATGGAAAAATCGTTTCACTAG
TGCTTTTAACGAGCGACAATTAAATGAACGTTTACAGTCAATCAAATACA
ATTGAAAGCTTTCGAAAAATTGAATATAGTTTATGAATGCAACTGATACG
AAGAGAAGGACGCATATAGAAAAAAACTTTATTTTAACAAGTTTGGATGA
GTTTTTGAATTTGAATAGGTATGTTTTAAGTGTATCTAGCAACTTACGAT
TTTTACGTTAGTGAACATGTCTTTCTTACGTACATATGAATAATCTCTTG
AAATGTCTTTATTGAAAGATGAGAGAGGAGAACGGTTATATGGAGTAATA
CGATTGTAATAAGAGTATTTGAAGCTATTTGAAGAGGGAAAGAAAGTAAT
AGATACGAACTGAACGAAAAACGATAAAAGTTATTTTAAGATAATTCGTT
TTAAGATTGTTACTATGGATAATGTTATAATACTATACTTCGTATTTCCC
ATGCTTTGTGCAAAAGCGTAAGATAAAAGAGAAAGAGAGTTTTTGTAATA
ATGCATAATAGATTTCTTACTATGTTAAACGATAAATACACGTTGCAGCA
AATGCGCTCAAAAAATCGAATTTAAAACACAGAAATCGTGAAAATATACA
TAAAGCGATGAAAGAAAGAGATGAACGAAATAGAGAATCGTGTGGCAAGA
GAAATAATTTACACTAAGTGTGTGTTTAGAAATCTTTTCACTAGAATCAA
AGGACTTACAAATATTTGTAAGTCGTTGCTAGAACTGAACTCAAGAGTGG
GGGAATCTTTCATTTATAATTGTAGAATCTCTACATGGGCTTAGAATGTA
CTCTATATGGTCCTATATGCTTCATACAGTCGACAGCACTATATCGAAAT
GACAAGTATTGCCTTGAAGGGGAAATATTTCCCGAAGAGAAGTAACATTC
CCCGGTTAGTAAGGAAATTCACCGGTTAACCACCTTTTTTTAATTCCATC
TTTTCTATATTTTCTTCCTGATTCGGCACATACTTCCAGAACAGAGTACA
AAAAATTGGTGGGTGGCGGCCAAAAAATAGGGAAATTATTTCCTTTTTGG
GCTGTTTTGGGCTTTCGGGAAATACATCATTCCTGTGATGGCAGTTCTTG
CGATTTCGATATTATGCTGCCGACTGTCTAGCAACCAATCTATTTTTGAA
ACCTAAACTTATATATTAAATCTTCTATTTTATTAGGTCATTAAAATGTC
AGCTTCCGAAGAGAACTTTAACAAAGGAGTGCAAGTTATGGAAAACTTGA
TGGAAGTTTTGAAACATCTACCAGAGAGATTGGGAACGATTGAAGCATTG
CGACAAAACTCTCCAGCAACGTGCAGTCCACCGAAATTGGTGCTACGAGA
GGCTGGCACGCAAACCGAAGATTCGAACGTATATGCCATTTTATCTACCG
TTGTCACTGAGTTGAAAGGTTTGAAAAGCCATGTCAGCTCTTTGGAAAGC
AAATTTGATAGCTTTAGTAGAGAGGTGGTGGATGGTTTAAACCAGCAGGT
GTCTAACCATCACAATCAACGATCGAGTAGTTATGAAGACTCGCCCACAA
GGAGAGAGTTAGACGACTATAATATTGCACCGAGTCTACTTTCCCCATCA
AGTCTCTGGCCGCAATTCTCAAATCACCAAAGCCACAGTGAAAATATCGA
AATCGTACAGCCAGAGATCGATCAACCGTTAAACATTCAGATCGGATCAG
TTTACAACATTAAAAAGGAGATCCCTCCAAGCCAAGATGGAATCGTTCAG
CCAAATCCTCAAATGATGCTGCTGACAAAACAACCTGAGGACTCTATCAA
CCAATTAAATAGAAATCGAAGCTATCAACAATCAAATCAAAGTAAAAGAA
ATGCAAAGTTAAGGGGACAAGAAACAAAAAGAGGAAGATGTATGCGTAAC
GGATGCGCCATTTTCATACGTCAACAACTTGCAAAATCATACACATCAGA
AGAGCTAGCCAGTAGAAGAGTTAATGCTAGTAGACGGACCTACCAAAAAG
CCGAGATTAATAGTTCTGCTTTGTCACCTAATCGATTGAAAGTGATCATG
AACAGTGCAAAAACCTTGTATAAAGATGAATTTGAAAAACTTCAAGAGAA
GGGAGAACTTAATGAAATCGTGAACTCGAAATGTAGAGCTGTCAAGTGCA
AGCTTAAAAAAATGAAGTGAAAACTGGTGAGATGTATTATAGGCATTAAC
AATACGCATAAATGCAATGCTATACAAAAACATTTTCCAGACGATTTTTC
ATTGCATTCGAATTTATAAAATCAACATTTTTCTTTGGAAAATATAAAAT
TATATGTAATACATAATAATGTAGAGTTGCATATAGTAAATTTTCGGGAT
GAGCTGGAGTTTTTATAAGATACTTAACTAATTGGTCATTTGAAGTAATA
AAGTAATAGAAATGACGCGTTCTATAGAAAAAGTAATAAGATTGTTTTTA
TTACAAGCTAACGACCAACCAAATCACATTAGAGCTGGTAAAAACTCCAT
CTTGTCCCAAATTTTCACGACCCTCATTATGACTAGCTAAATAATTTTTA
AGCCTCAAATACGCTCATGCTATGCTTTTGTAATGACGTATTACATAATG
ATGATTTACATATTGACAGTATACAGTAAATTATTATCTGAAATTTTGTA
AACTGAGGCTCATTTGAAATTATGCTTAGTCAATACTAAAGTTATTTCAA
GATTTTATAAAAAACAT Coding sequence (CDS) from alignment at sc0000087_pilon:898483..901249- >MSTRG.11860.1.p1 ID=MSTRG.11860.1.p1|Name=MSTRG.11860.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=975bp|location=Sequence derived from alignment at sc0000087_pilon:898483..901249- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGCTTCCGAAGAGAACTTTAACAAAGGAGTGCAAGTTATGGAAAA
CTTGATGGAAGTTTTGAAACATCTACCAGAGAGATTGGGAACGATTGAAG
CATTGCGACAAAACTCTCCAGCAACGTGCAGTCCACCGAAATTGGTGCTA
CGAGAGGCTGGCACGCAAACCGAAGATTCGAACGTATATGCCATTTTATC
TACCGTTGTCACTGAGTTGAAAGGTTTGAAAAGCCATGTCAGCTCTTTGG
AAAGCAAATTTGATAGCTTTAGTAGAGAGGTGGTGGATGGTTTAAACCAG
CAGGTGTCTAACCATCACAATCAACGATCGAGTAGTTATGAAGACTCGCC
CACAAGGAGAGAGTTAGACGACTATAATATTGCACCGAGTCTACTTTCCC
CATCAAGTCTCTGGCCGCAATTCTCAAATCACCAAAGCCACAGTGAAAAT
ATCGAAATCGTACAGCCAGAGATCGATCAACCGTTAAACATTCAGATCGG
ATCAGTTTACAACATTAAAAAGGAGATCCCTCCAAGCCAAGATGGAATCG
TTCAGCCAAATCCTCAAATGATGCTGCTGACAAAACAACCTGAGGACTCT
ATCAACCAATTAAATAGAAATCGAAGCTATCAACAATCAAATCAAAGTAA
AAGAAATGCAAAGTTAAGGGGACAAGAAACAAAAAGAGGAAGATGTATGC
GTAACGGATGCGCCATTTTCATACGTCAACAACTTGCAAAATCATACACA
TCAGAAGAGCTAGCCAGTAGAAGAGTTAATGCTAGTAGACGGACCTACCA
AAAAGCCGAGATTAATAGTTCTGCTTTGTCACCTAATCGATTGAAAGTGA
TCATGAACAGTGCAAAAACCTTGTATAAAGATGAATTTGAAAAACTTCAA
GAGAAGGGAGAACTTAATGAAATCGTGAACTCGAAATGTAGAGCTGTCAA
GTGCAAGCTTAAAAAAATGAAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087_pilon | genome | sc0000087_pilon:898483..901249 - |
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