MSTRG.1181.2.p1 (mRNA) -

Overview
NameMSTRG.1181.2.p1
Unique NameMSTRG.1181.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000005_pilon:3353757..3355461-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1181.2.p1 ID=MSTRG.1181.2.p1|Name=MSTRG.1181.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1705bp|location=Sequence derived from alignment at sc0000005_pilon:3353757..3355461- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTTTCTCCTCGCATTGCTATCTAACTTTCATCATCAGGTAGGTCCAT TCAGCATCTAGCTTGTTAAGCTTAATCTTGATCATGCAATTAACTTATTA ACTTGTAAATTCCTTTCTAGTAAAATGAATGATATAGAATAATGAATGGG GATGAATATGTTGCACTATCGCCATCAACACATATGGTTCCATGTTCTCC TTTCTTAAGAACTTATGAAGCCTCACCAGCACCTTGTGTTCCTGATGTTG ATCGAAATGCTACACGAAGACTTTATACCACAACTCAAGGTTTACGAAAT TTCCTCTTCTAATAAGACAGTTTCATTATAGTCATTATAAAAAACCATGG TCTGGTGATGTATTTTTTTAGCTTTATTATCAAATTTTCTAAATAAATAA ATATTTTTGTTTAAATAATAGGCAAGTTGCGATTTGCAAACTTTTTGACC AAGTTACCATATTTTCGACTCCTTGGGATTGGTTTATTTTCCAGTCACTC TATCAAAAACTATGCAAAACAAATCTATTTACGTACGAAAGCTCTAACTG TTAACAATAAAGAGAAAAAAAGTCTTCCAGACTGGGTTTTTTTATAATGA CTATGGTTTCGGACATTAGACTGGATTCATTTGCAGTGGTTTTACAGATT TATCGATGTTTGCTTTTGTGTTTACTTTTCTCTTGGAACCTCAAATGATT ATATTTCAGATTCGCAAGGTGGAACAATTTCACCGATGAGATTTTCTCAA CCATATTCACAAAGCTCACAAAATGATGCACAGCAGATACCAGCTACACC TTGCATTGATCAAAAACAAAAATCAGTACAAAAGAAAATTTCCTTAGGTT AGTAACATGTGAATGAATGATTTTTTTTATTTCAGCAATTATAACTATTT TGCTTAATTTCCCTTTTTTTAATAAAAGAACTGCTGTTGCTGCTGTTCCC TTCGAGGAGTTCTAATTCCTCAAATCTCTTTTTTTTTCCAGCCATGCCAA AGTACTATTAAAGTAATCAAAAAGGCTAAACAACTACAAGTAAGGTATTG TACCCTTGATAACTACAATATAATATGGGGCTAACATCCCATGTTTTTAA TGGAAATTTTCCTTTTCTTATTTCAAGAACAAGTGGTTCCTTCTTGCTCG CCTTTCATCAATTTTGATGACGAGAAGCCATCAAACTCACAACAAGCCAG TCAAGAATCGACAACAAATGATTATCTAGACATTTCCATAACAAACAACA ATATTGAACAAAAAGAAAATAGTGTTCCCACAGATGAGAAGCCACCTATA ATGAATCATTGCAGGCCTCTTCAGGACTTGGAAGGACCCAAACCAGCTAA ACGACAAGTCAGAATGATGACAAAAAGTACTGAAATTAAACCAATTGATT TTTTAAAAAGTGATAATATTTTTGGATGAACTCCTGTTTGAATAATAGTT TTTTTTCTCCATTTTTTAGGGATTTAAAAGGGGATTTAAAAAGGGATCAT ATTTAGCTGTACATATTTAGATTGAAATTCTTTCTAGTGTATTTGGTAAT ATACTTTTTAAGATTTCTACATTGAATTTAGGATGACTAGTCTGTATAAA ATTAAGCACTGGAAATACTGACGTAGAGCAATAAATAATTCCGACAGCCC AAATTTAAAGCACCTGATTTAAAAAAGGTAGTTTATGGAACTGTAAATGC TTTAT

Coding sequence (CDS) from alignment at sc0000005_pilon:3353757..3355461-

>MSTRG.1181.2.p1 ID=MSTRG.1181.2.p1|Name=MSTRG.1181.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=339bp|location=Sequence derived from alignment at sc0000005_pilon:3353757..3355461- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTTAATGGAAATTTTCCTTTTCTTATTTCAAGAACAAGTGGTTCC
TTCTTGCTCGCCTTTCATCAATTTTGATGACGAGAAGCCATCAAACTCAC
AACAAGCCAGTCAAGAATCGACAACAAATGATTATCTAGACATTTCCATA
ACAAACAACAATATTGAACAAAAAGAAAATAGTGTTCCCACAGATGAGAA
GCCACCTATAATGAATCATTGCAGGCCTCTTCAGGACTTGGAAGGACCCA
AACCAGCTAAACGACAAGTCAGAATGATGACAAAAAGTACTGAAATTAAA
CCAATTGATTTTTTAAAAAGTGATAATATTTTTGGATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1181MSTRG.1181Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1181.2.p1MSTRG.1181.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1181.2.p1.exon3MSTRG.1181.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1181.2.p1.exon2MSTRG.1181.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1181.2.p1.exon1MSTRG.1181.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005_pilongenomesc0000005_pilon:3353757..3355461 -