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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000086_pilon:1117352..1121430- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11793.1.p1 ID=MSTRG.11793.1.p1|Name=MSTRG.11793.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4079bp|location=Sequence derived from alignment at sc0000086_pilon:1117352..1121430- (Clytia hemisphaerica_ch_hm2_pilon)
ATTATATTTCCAAAATAAACAGATTTCGCTATAAATTGACTTATTTTGCA
CAGAGTGATGTTTTGGTAGAACATACCTTCTTGTGAAGAGAGTTAATACT
TAAACTATCTTGCTGCAGATTAAAATCGAACAGCTTGGAAAAATAAATTT
AATTTTTTTGAACAGAGAAAATCGTCAAAAAATGAATATCTTCACAAAGT
CGATCACACGGAAGATCAGTCGGCCAGCTTATGCTATCCGAACATTAATC
AATGATTCCGTTTCGGTTAAAGAGAAGAAAATCGGTATTATCGGAATGGG
AAATGTTGGTACGGCGGTGGCAAATAATTTATTGAGAAACAACTACAAGT
TGACGAGCATTATAGATATCGAAGCAAAAAAATGCGAAGGCTATCCGTGC
AAAGTTGGGAAGACTGCGAGAGAGGTTGTAGAAGATTGTGACGTCATCGT
TTCCGCACTACCTAAGCCGGTACATATCAAACAAGCTTTTGAAGGACCGG
ATGGCATGTTAGCCGGAATGTCTCCAGGTAAGCATGCGAGTAATTCTCGA
TGTACTTTAAGGATAGAAAATTTCATGATTTTCATTATTTTGACACTGGA
GTTTCTACCAAATAAAAAATAAATTTGAAAAAAAAAAACACTTTCAATAG
TTGGAATTATTCTCTAATTCGAAACGAATCCCTTGAAAATAAGAGAGCGT
TAACATTTATCGGGTTATAAGACTGCCTTTCCAAAAATAGGAGGAAAACC
TGAGTAGTCTATACTGTTAAAAGGACTACATTTAAATACAATATCAAACA
CTGGGCGAAATAAGAGATTTGAAATGAAAGATATTCTTTATTCCAGATCT
GGAAATATCTTGAAAATATGACTTTTCTATATTTCCAAAATTGTGGAAAT
ACCATATTTCATGATATTTCCAAATCATATTTTAAAAACATTTCCAACTT
TTGGAAATAAGATATTTCCAAAGATTGGAAATATCTTGAACATATGATGT
TTCAATGAATTTCAGAATTGGAAATATCATGAAATATGGTATTTCCACAA
CTTTGGAAATATAGAAAAGTCATATTTCCATATTTACAAAAGTGTATGGA
AATATCATATTTTCAAGATATTTCCAGGATTGGAAATCTCTCATTTCGCC
CAGTGAAAGATTCATAGGATAAAATTATTTTTGGAAACTATTGCAGGTTA
GAAAACTGCATCTACGAATAAAAAAATATTAAGAAAGCCTGATTGATTCC
CGAAGTATTCATATACATGCACTTTTATGATCGAGTTTTTCTCATAGCAA
AATATTCTCGTCGATTGTTAAAATATCAATGGTTTAAATATACTATGAAA
CTGATTTTCTGAATATTTTGAGCTTAAAGCCATTCTCTCAATTTTCTTAC
CATTTTTGTGCAATTTTTTAAAAAATTGGGTTTTAAATTTTTCTTTAATT
TGGCCATAAAAGCCTAATGTTCTCATATAGTTTGTTCTTATAGGAAACAT
GTATTAATTCTCATCTCTATTCTAGGGAAAATTTGGATCGATCACTCAAC
CACGGATTTCAAGCAAACGGAAGAACAAACAAAAGTTTTAGAAGAAAAAC
AATGCTACTTACTGGAATCTCCCATTACCGGTGGTTTAGAAGCATTACGG
AAAGGCCAGATGACCGTATTAGTAGCCGGAAATAAGGACGCTTTTGATCA
CACTTATGACTTACAGAACGCGTCTTATCAAACAGTTTTGTATACCGGTG
GTGCCGGAAGCGCGCTCATTCCGAAAGTGATATCCAACATGCTTTGTGCT
ATGGTTACCATAGCAGCTGGTGAGGCATTGGTTGTTTGCAAGAAGGCTGG
TATGGACGTGAAGCACACTTACGATATCATTCGCGCGACCGCTGGGAACA
GTTTCGCGTGGGAAACAGCGGTGCCTATGATCGCGCAAGGAGATTACGGC
ACCGCCTTTACGTTAGATCTTTTCTGTAAGGATAATCAACTTATGCACGA
TATCGCGCGTCAATATAATGTTCCAATCGAATTGATGAGCCATGTACAAC
AAATGTATAATCGCGCCCTTGCTATGTATGGACCTGACGCCCCTTGTTAT
AGCCCCGCCAAGATTGTTGAAGACGCAACGGGCGTTAGGTTGCAAGATGA
AGGTTTTAAAAATTGGGAATATTCGGTTGAAGATGTAGATGGTTCGCTTG
TTGTTCGACATGATGGCATCGAAACAAAGCGTACCGGTCACCCAATGCCT
AAGTAGAAATTATCTGAAACATATATCTCCTGTGAAAAAACTGTTAGTTT
ATTGAAATATTAAAATGTTATGAAAATATTATATGAAATGATTAGATGAT
GAATATATTTGATATATAATATATTTGATATTATAATATATATGATAATA
TTTTGAATAAATTTTACACAATATTGAAATGATGTATTTTTCACTGTCCG
CTACCCTTCCTTTATTTACAGCTCCATGTAGCAATAAGAAAAGTTTCATT
TTGAAGATTAAAGTATAACGAATCGCTGGGAACAAATCAAATTAAAGAAG
CAACTCTTCAAACCCTCACGATCCAGGACTGAAAACACTGCAGTAGAGTC
TCTTTAACTCGATCCTCTATAAATCGAATGTCTCCTTATTATTGCGGACA
AGTTTTCTTGCTACTCAGTTAACAATGCCTTATAAACTTATCTCCCTAGC
TCGAACAATTTTGTGTTCCCCGTACGGGCTCGAGTTATGGAGAATCTATT
GTACTTTTCTTGGCCGATTTGTAAATACATCTGACGCTCTCTAATTCGAC
GTTCTACTATTCGATAGGTTCACTTATTCGATGAAATTTAAAATCCCCGT
CAACAAGAAACTCTCATAAGCGACGCTCTATTATTCGATAAGCTCTCTTA
TTCGATGAAAATCCAATTCCCCTTGAAGATCGAATTAGAGAGAGTCAACT
GTAATAACAATGACCAATATTTTAAGTGGCTGGCCATGAAATGATGACTT
AGCATTTAGGCAGTTGAGCCATTGTCTCCCCGGGGGCCACTTGTATAACA
TAACAGAACAACAACTGGAACGGTAACTGATTTAGATAATAAATGATAAA
TTTCTAATTGTAAATACGAGTTTTGAGTTTGTTTTTAAACGATAAAAGGG
ATTGATATTGTTTCATCTCTAAGGGTAGAATGTTCCACAGATGTCTGGTT
GAGGTAATGAACGTTTGACTAACAAAGATGTTTTTGGCAAGAGGGACTAC
GACATTATTCTCTCTCGTATGTGATCAATAGTTGAATGAAGCAACGAAGA
GGATGAAAATGAAGAAGAAGCAGACATTGGCGGCAACTTCAAAACGAGAA
ACCGAACAACAACAACTTTTTCTTGACCACCAGTCTTTATGATCTTGATT
TTCATTGGGTGAGCTAAACGATCGAAGCGTATTGTAGAATATCGCATTTT
GACGTTCTGATAGATGATAAGGGTAATTGGAGGTCTGTCCTAAATCTACA
CTAACCTCTGAAACTGTCCTTGTCGGAGAGATATGATGTAAACCTTCTAG
TTGTTTAGCAAGATTCAATTGCAAGTATCCACTTGACAGCAATTCGTCTA
AATCATGGGGACTGTAATCCAATGATATATATTCTGGTGTATTTTGAAGT
GATCTTGTAACTTCTTGAAAAACGCCTTCTTTTTGAAAGAAATTTTGAAT
TGCCAAAGTTATGCCATTAGAAGAAGGATTTTCTTTGAATTTTTCAATAT
CTTTACAGAAATCGTCATCTTTAAAAATCAATCTCTTAATTATTGACACG
AACTTATCGGTAGCTTTATTGAAGTTGTGTAAAATGGTGTGAGCAGCATA
AACTCGACCAGAACGCTGAGGCGGCGATAGAGTGCTCATTTCTTCGATCA
AGTAATTTAGTTGATAAATCCCTGTCTCAATATAATTTGCAACGAGAGCA
AGAACGACGTACAATAGTTGACGTAGACCAATGTCAATTGAATACTATAC
ATGGTCGGGAAGTCCCAGCTCCGAGGTTGAGATTTTTTTTATTTTGGTCA
CGTGATCGTTTCGTATGTGCAGATTTCGG Coding sequence (CDS) from alignment at sc0000086_pilon:1117352..1121430- >MSTRG.11793.1.p1 ID=MSTRG.11793.1.p1|Name=MSTRG.11793.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2154bp|location=Sequence derived from alignment at sc0000086_pilon:1117352..1121430- (Clytia hemisphaerica_ch_hm2_pilon)
GGAAAATTTGGATCGATCACTCAACCACGGATTTCAAGCAAACGGAAGAA
CAAACAAAAGTTTTAGAAGAAAAACAATGCTACTTACTGGAATCTCCCAT
TACCGGTGGTTTAGAAGCATTACGGAAAGGCCAGATGACCGTATTAGTAG
CCGGAAATAAGGACGCTTTTGATCACACTTATGACTTACAGAACGCGTCT
TATCAAACAGTTTTGTATACCGGTGGTGCCGGAAGCGCGCTCATTCCGAA
AGTGATATCCAACATGCTTTGTGCTATGGTTACCATAGCAGCTGGTGAGG
CATTGGTTGTTTGCAAGAAGGCTGGTATGGACGTGAAGCACACTTACGAT
ATCATTCGCGCGACCGCTGGGAACAGTTTCGCGTGGGAAACAGCGGTGCC
TATGATCGCGCAAGGAGATTACGGCACCGCCTTTACGTTAGATCTTTTCT
GTAAGGATAATCAACTTATGCACGATATCGCGCGTCAATATAATGTTCCA
ATCGAATTGATGAGCCATGTACAACAAATGTATAATCGCGCCCTTGCTAT
GTATGGACCTGACGCCCCTTGTTATAGCCCCGCCAAGATTGTTGAAGACG
CAACGGGCGTTAGGTTGCAAGATGAAGGTTTTAAAAATTGGGAATATTCG
GTTGAAGATGTAGATGGTTCGCTTGTTGTTCGACATGATGGCATCGAAAC
AAAGCGTACCGGTCACCCAATGCCTAAGTAGATGAATATCTTCACAAAGT
CGATCACACGGAAGATCAGTCGGCCAGCTTATGCTATCCGAACATTAATC
AATGATTCCGTTTCGGTTAAAGAGAAGAAAATCGGTATTATCGGAATGGG
AAATGTTGGTACGGCGGTGGCAAATAATTTATTGAGAAACAACTACAAGT
TGACGAGCATTATAGATATCGAAGCAAAAAAATGCGAAGGCTATCCGTGC
AAAGTTGGGAAGACTGCGAGAGAGGTTGTAGAAGATTGTGACGTCATCGT
TTCCGCACTACCTAAGCCGGTACATATCAAACAAGCTTTTGAAGGACCGG
ATGGCATGTTAGCCGGAATGTCTCCAGGGAAAATTTGGATCGATCACTCA
ACCACGGATTTCAAGCAAACGGAAGAACAAACAAAAGTTTTAGAAGAAAA
ACAATGCTACTTACTGGAATCTCCCATTACCGGTGGTTTAGAAGCATTAC
GGAAAGGCCAGATGACCGTATTAGTAGCCGGAAATAAGGACGCTTTTGAT
CACACTTATGACTTACAGAACGCGTCTTATCAAACAGTTTTGTATACCGG
TGGTGCCGGAAGCGCGCTCATTCCGAAAGTGATATCCAACATGCTTTGTG
CTATGGTTACCATAGCAGCTGGTGAGGCATTGGTTGTTTGCAAGAAGGCT
GGTATGGACGTGAAGCACACTTACGATATCATTCGCGCGACCGCTGGGAA
CAGTTTCGCGTGGGAAACAGCGGTGCCTATGATCGCGCAAGGAGATTACG
GCACCGCCTTTACGTTAGATCTTTTCTGTAAGGATAATCAACTTATGCAC
GATATCGCGCGTCAATATAATGTTCCAATCGAATTGATGAGCCATGTACA
ACAAATGTATAATCGCGCCCTTGCTATGTATGGACCTGACGCCCCTTGTT
ATAGCCCCGCCAAGATTGTTGAAGACGCAACGGGCGTTAGGTTGCAAGAT
GAAGGTTTTAAAAATTGGGAATATTCGGTTGAAGATGTAGATGGTTCGCT
TGTTGTTCGACATGATGGCATCGAAACAAAGCGTACCGGTCACCCAATGC
CTAAGTAGATGAATATCTTCACAAAGTCGATCACACGGAAGATCAGTCGG
CCAGCTTATGCTATCCGAACATTAATCAATGATTCCGTTTCGGTTAAAGA
GAAGAAAATCGGTATTATCGGAATGGGAAATGTTGGTACGGCGGTGGCAA
ATAATTTATTGAGAAACAACTACAAGTTGACGAGCATTATAGATATCGAA
GCAAAAAAATGCGAAGGCTATCCGTGCAAAGTTGGGAAGACTGCGAGAGA
GGTTGTAGAAGATTGTGACGTCATCGTTTCCGCACTACCTAAGCCGGTAC
ATATCAAACAAGCTTTTGAAGGACCGGATGGCATGTTAGCCGGAATGTCT
CCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086_pilon | genome | sc0000086_pilon:1117352..1121430 - |
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