|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000086_pilon:1037641..1040822+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11787.1.p1 ID=MSTRG.11787.1.p1|Name=MSTRG.11787.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3182bp|location=Sequence derived from alignment at sc0000086_pilon:1037641..1040822+ (Clytia hemisphaerica_ch_hm2_pilon)
AGcaatatctgaaaaaaaaacgaaataagtattgaaaaatgaaaatgtca
acATCTAACCACAACTGAACTGCAATGAGAAGACACTATAAACCGTTTGA
TTCCAAAGCATACTGACAAATTCAACAACATCGTCTTGGAAACATGAGTA
ACAACACAACAATAAAACCTACAGATTTGTTACCAGTTGAAGCTAAGGAT
ATACCACAAATCATCATCTGCATCGTTGGTTTCCTTGGTAACCTTGTCGT
CATCAGTGCAATCATATTCGATAAACGTCTTCAAACATCTTTGAATTATC
TGGTCCTCAATTTATCATTCTGCAATATTTGTGTTGTAGTATTTTCGATT
CCGTTCCAACTGTTAACTAAAAGACACCATCATGATTTTATATTTGGTGA
ACTTGGATGTCAACTTATCTATCCATTTGCCACGTGGGCTGTGAATGTTT
CAGTATCCTCGTTACTGACTATAACAATCGAGCGATGGATTGCTATAGTC
CACCCGATGACTTGGAGATCTTGTCAAAAACATActttaaaaatgatatt
tgcAAATCATGTGTATGGTTACGTCACTATTATTCCTTACGCAGTTCATA
TTAGACTCGCAGTTATCCCTGGGACGGAGCTACGATACTGTGCAGAGATT
TGGGATACCGGTACAGCAAAATTCTATACAATACTCTTGTTTTTATTACA
ATATTTACTACCCCTTGCATTAATGATGTTCTTTTATACAAGCGCCTGGA
TCCACCTTAAAAGACAGAATGACCATACGATTCGTTTATCAGAAGAAGCG
CGTACTGCTCGATCAATGTCGTTAAGATTGAACAACGAGGAAGAAATACG
TGCACGATTCGCCAAACGAGGTCGAACAGAATCGATTTTATCGACAACTT
ATTCGGGAGAAGCTAAGGACATGTGTTTGATGTTTTGCTTGAAGATGTTC
CGTGTTAGCAACTATTATAAACGGACTTCGTCTTCGGCGTCCTCGTCATA
CGATAATGCCGATTATTTCATCGCAAACGGTCGCCGACGGCAAACGATCC
GAACATTTTTCATGTTCCTTCTCATCATCGTGATCTTTGCAATCAGCTCG
TTACCTAATCAAATTATATGGCTTGTTTATAGTTTCAAACAAGGAGCTAA
ATTCTCAGAAAGTGTTACCTCAACATTTGTTATCTTCCATTACTTGAACT
ATATCATGAACCCATTCATTTATGGTGGATTAAACAAATACTTCTTGAGA
GCTTATAAACGTTTATTTTTGTGCTCTCATTCAGAGGAAAATAACAACAC
TTCAACAACATTAGCTCCTCCATGTTCACCCGGACTGACAGGACATCCAG
ATTTATTCCGGGAAGGAATTATCACTCGAAACCCGGTCAACGTTATAAGT
GCCGGATCTCTTGATTCTATTTATGAAGAGGCAGAAGAAGAGGACGAATG
GAGCGTTGCGACGGATAAAGATCAAACGCCGGTTTCCTCACCTCCAATGT
CAACAAAACGTGTTAAGTTCAAATTCTCAGTCACGTCAAATCCGTTCCGT
AAATTATCAACCATTTCGAATATGAGTGATCAAGAAAAGAAAGAGAGACG
ACATCGTAAGATTTCCCAAGCTCTGGTACAGGATCGGCAACGTAAGTTAA
CGTTACCCGCCTTAGCAGCCAGTACCAGTATAAATCATGAAGATAAAGCC
AGAATACGTAAACATTCAGTACCAGCACAAATCCAAAATCCAAAAGCGTT
CATCTTTGATGATAGTTTCTCAGTACTTCCACCAACGCGAGTTAACAGTT
CAAGCTTGAAAGATAAACTGAATCTTCTAACAAGTAGAGTATCTCCAAGA
TCGAGTGTtactgaaattttgaataacaatACACTGCCAACTAAGGCAGT
AACTTCGAGGCGTAGAAAAACAGGTATTTTCAATATGACTGATTCGGGGA
GCTTTGAAACACATAATAATGGACAGAAATCttgttttgatcaaatttca
gAAGAATCTGAAGTCTCAAGTCATTCTGAACGAAGCAGTCTGCTTAGTCA
TGATTCATTAAAGAGAAACAGCGGCATAACTCATAGTAAAACCTTCGGAG
GGTTCCACAGGAACTCGTACATCGATAGTGAAACGAACTGTAAAAGATCG
TCTTGTTATTCGCAACAATCTTTCGCTGAAAGTACTAACAGTCTTGATAA
TGATTGCACCACTACTGAACAACCAACGTGGTATAATAATCGAAGTTTTG
ATCTCAAAGACGGTAGCTATGAAGATGTTCACATTAATCTCAGCTCCAGT
AATGAAAATTTAATTGACTTGAAAAGAAATCTACTGGGTGATTTATCAAA
AACCTCCGATAATAAAGCTGAAATTGTTGAATATCCAAAGTTATCGTCAA
CTTTGGAAAATTCAGATTCGAAACAAAATATTAGACGTTGCTCAAATACA
GAAATTGACTGTGATAATATGGAAGAATCTCAGTCGTGTAGTGACAATCT
CATTAATGATTCTAGAGCATGCGCAAACGATTTCAGACACAATCCCGGAC
AGGAAACTCGCGCATGCGCAAATGATAGTGACAATGAAGAATTAGATAAA
ATGCTGGAAGAAATAGAAAATCTCCGAGATTCTTGGTATCTTGACGGCTC
CTCAGATGTCCAAGAGCAATTCTGCTATTTGTTGGCAAAACTGGAAAAGC
ATTCTTTGACAAGGCACCTGTCAACttctaaaaacatttcaacACAAACT
TCAGATAACAGGGATCTTGAAGACTCCAGCAGGTCTTCATGTATCGGTTA
TGAGGTTTCTGATGAGATTTCTTCGATGGATAAAAGACAAAACTACAAAG
ACTATGATTTCGACAGCCTTGATGAAATGCCAGAATCttatctttaaaaa
ttatttatgtTGTATatggaaaagaaatttttaagattgataaaatattt
ctaatgaaaaatacactcaaaatgTTCAAACCATTCTAGCGCCCCTTGAT
TAACTCAGCCTGTCCCAAAATAACGAGCAAATAAAAACAGGTCAAAAAGT
AGTCTAAGAGATTACCGTTTTTACCTATaaccatggaattattatagaca
ctggaaaaacaatgagctgaattttgccaatttctcatgtacaagccttg
tccgcagtaatgacattattgttcaccctcct Coding sequence (CDS) from alignment at sc0000086_pilon:1037641..1040822+ >MSTRG.11787.1.p1 ID=MSTRG.11787.1.p1|Name=MSTRG.11787.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2754bp|location=Sequence derived from alignment at sc0000086_pilon:1037641..1040822+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTAACAACACAACAATAAAACCTACAGATTTGTTACCAGTTGAAGC
TAAGGATATACCACAAATCATCATCTGCATCGTTGGTTTCCTTGGTAACC
TTGTCGTCATCAGTGCAATCATATTCGATAAACGTCTTCAAACATCTTTG
AATTATCTGGTCCTCAATTTATCATTCTGCAATATTTGTGTTGTAGTATT
TTCGATTCCGTTCCAACTGTTAACTAAAAGACACCATCATGATTTTATAT
TTGGTGAACTTGGATGTCAACTTATCTATCCATTTGCCACGTGGGCTGTG
AATGTTTCAGTATCCTCGTTACTGACTATAACAATCGAGCGATGGATTGC
TATAGTCCACCCGATGACTTGGAGATCTTGTCAAAAACATActttaaaaa
tgatatttgcAAATCATGTGTATGGTTACGTCACTATTATTCCTTACGCA
GTTCATATTAGACTCGCAGTTATCCCTGGGACGGAGCTACGATACTGTGC
AGAGATTTGGGATACCGGTACAGCAAAATTCTATACAATACTCTTGTTTT
TATTACAATATTTACTACCCCTTGCATTAATGATGTTCTTTTATACAAGC
GCCTGGATCCACCTTAAAAGACAGAATGACCATACGATTCGTTTATCAGA
AGAAGCGCGTACTGCTCGATCAATGTCGTTAAGATTGAACAACGAGGAAG
AAATACGTGCACGATTCGCCAAACGAGGTCGAACAGAATCGATTTTATCG
ACAACTTATTCGGGAGAAGCTAAGGACATGTGTTTGATGTTTTGCTTGAA
GATGTTCCGTGTTAGCAACTATTATAAACGGACTTCGTCTTCGGCGTCCT
CGTCATACGATAATGCCGATTATTTCATCGCAAACGGTCGCCGACGGCAA
ACGATCCGAACATTTTTCATGTTCCTTCTCATCATCGTGATCTTTGCAAT
CAGCTCGTTACCTAATCAAATTATATGGCTTGTTTATAGTTTCAAACAAG
GAGCTAAATTCTCAGAAAGTGTTACCTCAACATTTGTTATCTTCCATTAC
TTGAACTATATCATGAACCCATTCATTTATGGTGGATTAAACAAATACTT
CTTGAGAGCTTATAAACGTTTATTTTTGTGCTCTCATTCAGAGGAAAATA
ACAACACTTCAACAACATTAGCTCCTCCATGTTCACCCGGACTGACAGGA
CATCCAGATTTATTCCGGGAAGGAATTATCACTCGAAACCCGGTCAACGT
TATAAGTGCCGGATCTCTTGATTCTATTTATGAAGAGGCAGAAGAAGAGG
ACGAATGGAGCGTTGCGACGGATAAAGATCAAACGCCGGTTTCCTCACCT
CCAATGTCAACAAAACGTGTTAAGTTCAAATTCTCAGTCACGTCAAATCC
GTTCCGTAAATTATCAACCATTTCGAATATGAGTGATCAAGAAAAGAAAG
AGAGACGACATCGTAAGATTTCCCAAGCTCTGGTACAGGATCGGCAACGT
AAGTTAACGTTACCCGCCTTAGCAGCCAGTACCAGTATAAATCATGAAGA
TAAAGCCAGAATACGTAAACATTCAGTACCAGCACAAATCCAAAATCCAA
AAGCGTTCATCTTTGATGATAGTTTCTCAGTACTTCCACCAACGCGAGTT
AACAGTTCAAGCTTGAAAGATAAACTGAATCTTCTAACAAGTAGAGTATC
TCCAAGATCGAGTGTtactgaaattttgaataacaatACACTGCCAACTA
AGGCAGTAACTTCGAGGCGTAGAAAAACAGGTATTTTCAATATGACTGAT
TCGGGGAGCTTTGAAACACATAATAATGGACAGAAATCttgttttgatca
aatttcagAAGAATCTGAAGTCTCAAGTCATTCTGAACGAAGCAGTCTGC
TTAGTCATGATTCATTAAAGAGAAACAGCGGCATAACTCATAGTAAAACC
TTCGGAGGGTTCCACAGGAACTCGTACATCGATAGTGAAACGAACTGTAA
AAGATCGTCTTGTTATTCGCAACAATCTTTCGCTGAAAGTACTAACAGTC
TTGATAATGATTGCACCACTACTGAACAACCAACGTGGTATAATAATCGA
AGTTTTGATCTCAAAGACGGTAGCTATGAAGATGTTCACATTAATCTCAG
CTCCAGTAATGAAAATTTAATTGACTTGAAAAGAAATCTACTGGGTGATT
TATCAAAAACCTCCGATAATAAAGCTGAAATTGTTGAATATCCAAAGTTA
TCGTCAACTTTGGAAAATTCAGATTCGAAACAAAATATTAGACGTTGCTC
AAATACAGAAATTGACTGTGATAATATGGAAGAATCTCAGTCGTGTAGTG
ACAATCTCATTAATGATTCTAGAGCATGCGCAAACGATTTCAGACACAAT
CCCGGACAGGAAACTCGCGCATGCGCAAATGATAGTGACAATGAAGAATT
AGATAAAATGCTGGAAGAAATAGAAAATCTCCGAGATTCTTGGTATCTTG
ACGGCTCCTCAGATGTCCAAGAGCAATTCTGCTATTTGTTGGCAAAACTG
GAAAAGCATTCTTTGACAAGGCACCTGTCAACttctaaaaacatttcaac
ACAAACTTCAGATAACAGGGATCTTGAAGACTCCAGCAGGTCTTCATGTA
TCGGTTATGAGGTTTCTGATGAGATTTCTTCGATGGATAAAAGACAAAAC
TACAAAGACTATGATTTCGACAGCCTTGATGAAATGCCAGAATCttatct
ttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086_pilon | genome | sc0000086_pilon:1037641..1040822 + |
|
