|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000086_pilon:808791..812875- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11772.1.p1 ID=MSTRG.11772.1.p1|Name=MSTRG.11772.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4085bp|location=Sequence derived from alignment at sc0000086_pilon:808791..812875- (Clytia hemisphaerica_ch_hm2_pilon)
CGATGAGGAAGTCTAATCTGGGGGCCGTCCACATAGTACGTACGCACTAA
GGGGGGAGGGGGTCTTCTCAAAAGCGTATGCTTGCGTACAGGGGGAGGGG
AGGGGTCAAAGGAAAATGTACGTACGCAGAGAAAAAATTTTCATAGCCCT
TTTCGCTTGTTTCTTTGTCGACTTTTACGCTTGTTATACGCATCAAGGAA
AAGAAAAAGTTTCTTAATAAACATTGAGTTTCATGTATAAAATAAAGGTC
CGAACCAAACGATTTGAATTCGAAATTTTCTTCAACCGAGGGGGGAGGGA
TGAAAAAGTACGTACTTACCAGAAGGGGTATAGCCATTTGCGTACGCTTA
CATACAGGGGAGCGGAATGGGTACTCGATTTTCGACATTTTAGTGCGTAC
GTACTATGTGGATGCCCCCTAGTGGATCACGTAATTATATGTTCATGCAT
AGATTGAAGAAGATGGTTAGACGGGAAGCCGTCGGGCCGTCCTATTGTTC
TCCCTTCATTGTGCGGCTCAATGTTGGCTAACTAGAAAACGATCGTAGCT
TCCTGCACAGATCAAAACAAGATGGCGGCGTCCGAAAAATGAAAGAAATG
AAGTGCAACAGAGGCTGGTTGGCGAACTACAATTATGGACAAAATATTTG
GGACTAAGGGAATTTCCCTGCGAAATTTTAAAAACTGCAAAAGATTTTTA
ATTTAAGCGCGTTAAACTACAGTTGGAAAATAGAGTTTTAACATGAGACT
CGAGAATTAGGGCCTTAGGATCTCTGGATTTAAAAGCTGAAATTTACTCC
AATAAGGCTTGGAATATAGCCAAAATCGAAATATTCAATGAAAGAAATGG
CAAATTCTCGCCCGAACTTTAAATTCTGAAAAACGTTAAAATACACTAAA
ATCTCAATATATTTCGATCATGATTGTATCCACAAGAAAATTTTAAATAG
ATATATAATTTGTTCCGATTTTTTTTCCGGACACTGAAATATGATTTGAT
GACAAGTCATCATTTATTTTAATCATTCGGATACTTTCTCTTTGTTAATA
GCTTTATATAATCTAACGGACACATATATTGATGCGTATCCTCTCAACCA
ATCACACGATTGCTTTATCGTGCCATATTTTGTGTTCATTAGTAAGCTGT
CAATTATCACTTGAGAAAGAAGACGAAAGGATGGCAATGCAATAAGATCC
AGGTTATAACTAGACAATTTGGTTTCAGGTATAAATCTTTTCGTCCACTT
TTCATAGACTTCGGCATTCATAGTTTACAGATAACTGAAAATTTCAAATA
AGCGCAGAATCTTTCACGTCTCATTGCAATCTACAACCAACATATTAATT
TATTTATTCTATTGATATTTTTTCTATTAGTGTTTATGAAATTAATTAGC
TACAAAATATTTATGTACAGTAATCAAAATAATTCAGAAAAATAAATACA
TGGTCAAATTTAATAAATAAATATAAATAAACAAACATATTTTGTCATTT
TAGAGTGTGCTACCACTTACCACAAAATCAAAATGGATTCCATAAACGTC
ACCGATAAATTACGACTCTTAATCGCAATCTTATCCATTGTGCTTAACAC
ATTAAAATTACTGATGCTGTATTCCAAGAAAAGAGGTCTGGTGCTCAATG
TGACGTCAATATTTTTCATCCACTGTGCCATCACAAACTGGCTGGTCGGT
GTTTCAACTTTAATATGTATCGCTGTTAAAGAAGGATCAACAAAGAGTCA
CATCGAACTCTTTTATTACCGAAGTTTATTGACGCGTATCGCGTTGACGA
TAGTTTCACTAAATTTGATCATTTTTGTTGCGATTCGTTACCTAGCTGTT
ACCAACATAGATTTTTATAGACGCATCAATCGTAAGATATACATTCGAAT
TTGCATCGCAGCTTGGTGCTTAACATGCTTCATTGTGTTTGTATCACACT
ACCTTTTCGACGTCGATGTTCCCAATTACGAGGAGTTTTTCACGCATTAC
GTGTCCTTTATAATCATTCCAGGAACAATAATCATCGTAGTTTTATACGG
ACGTATAATGTCAACCATACGCAGACAACAGAATCAATATTTTCTTCACA
CGTTTTACTGTAACTCGGAGAAATGTCGTAATTTAAGTAGCGCTAAACAA
ATACAAACCAAGCCGTTTCAGCGAATCGAGGAAGAAATCGAACTACAATC
GAAAATCCAATCCAATAAACAACATTCTATCATTGACTTAGCATATCAGA
AACGTTTTAATAATCTTTTCGAGATTAAACTTATCAAACTTCTTGGTATT
TTCATCGTTTTATTTGTGATTTGCTTGCTGCCACTTCCAACTTATTGTAT
AAACACTCAAAGCACCGGTCATGCTTTTAAAAGCGACGGTGCTTTCAACC
TATTGGTGAACTTGGCTTTCTCATACTGTTTGCTTCAACCATTGTGTTAT
ACAATCCATACCAAAACAGCGAAACGCAGACAAACAAAAACAATCTCCAA
TGATTTGTATGGAGCATAAAAGACGATAACTTCATTGATATCATAGTATT
TCCGCATTCTTGTAAATTTATTATACTCATTGTTCATTTTGGATGATAGA
TATAAATCTCATACTGGAATTATTTTTCAATGCTGTTATTTATCATTTGG
TCCTCAGGGGAATTTCGGTCGTTATTATATTCCTATTTTCAAATTCATTA
CATTAGAGAGTACGGCGATCGTTACGTTTTTCTGCACACATTGTATACAT
CGCACAGTGTTGGTTTCAAGGCTTAAGAATTTCATGTATCGTCCAAAAGT
TTGGCCAGACAGTCCGCAAATTGGAATAGATTTTTCAGCGTATCCAATGC
GAGGTCTTTCTTTAAGAACTTGTAGAAAGTATCTGGAGCCTAAAATAAAA
AACATATCAATGTTCAATTTGCAGTTGAAAGAGCAGGGCACAAACATTCT
CTGTCCATTGACGTGAAGATTGAAGATTGCTCAAAACTCGAACCAAAGTT
TCGCCTATTGGGATAAGTGCAAGAATTGTTAAGTATAGTTGTCTTTAATG
GAGATGAAATCTCAGAGTATTTGAGATTGAAACAGTTCTTGATTCTTAGA
CAGACTTTTCAGTGGCTAGGGGGATCCCGGTGATACAGGGCGTATCCCGG
TGATACAGAGAAAGTTAGGAGCTTGCATCCGAAGTAATATAGTTCGCATA
CATTCTTTTTTAAATCTTATTAAAAGAGCACTACACTAAATAAAGCTTGT
TGAGTGGGTTGGTTTTATGTCCCCTCCCACTGATTGTCTAAAACCTTTCT
TCCTGAACAAACGATACATCAAATGAAGTATAGGAAAGATGGGATTTATA
AAATTTAGAGAGGAAACTCTACTACTTTTTTTTTAATCAGGATTATAAAG
TCAGATTTGTCACAATGTGTTTTTGTTCTTCTCGAACCTTTGTTCATAAC
TTTGAAATCTCAAACGGTAATAATCAAGTGAGAAAATGGCCTTTATCTCA
CCAGCAATATTTCACAACAATCTTCTCCGCATTTTAAAGAAAATGGGAAA
AAATGGCATAGCCTGCTTTATTTTGTTGGGTTTATACATAAGACCCTCGA
TAGAATTTCGAAGAAAAGCTTCAAACACACGAGTAAAAAAGTTCCATCGG
ACACAAAGACATATAAACTAAGGGAGTTATAGGTTTTAAGGTCAATGATT
TTTGCTGGGTGAGCACATTCAACTCAGCCACATATCATTTTCGAGGTAAA
ACCTAATTCTATTGGATTAATCTCTTTCTACTCGCTATATACGCTTTCTT
GTCAATAGAGGAAGAGTATAATAACGAACAATCTTCTCCATACATACACA
CCTCTTTTCGAAGGTCAAATAAGTGGAGTAAAACGTATCCATCTAAATGT
TTAACGATGACGTCACCATTTACTATCAGTTCGTTGGATGTGATCCATTT
ACGCACGTCATCTGGTGTCCATTGCGAAATTTTTCTCCGGAGCTCCTCTC
GATCGTTGAATTTTGTGGATGGTTGAGGACTAGGCTGAGGCTTCAAGACT
AAATCGATTGAATGCAAAAAAGTGAAAGTGTGGAC Coding sequence (CDS) from alignment at sc0000086_pilon:808791..812875- >MSTRG.11772.1.p1 ID=MSTRG.11772.1.p1|Name=MSTRG.11772.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=987bp|location=Sequence derived from alignment at sc0000086_pilon:808791..812875- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTCCATAAACGTCACCGATAAATTACGACTCTTAATCGCAATCTT
ATCCATTGTGCTTAACACATTAAAATTACTGATGCTGTATTCCAAGAAAA
GAGGTCTGGTGCTCAATGTGACGTCAATATTTTTCATCCACTGTGCCATC
ACAAACTGGCTGGTCGGTGTTTCAACTTTAATATGTATCGCTGTTAAAGA
AGGATCAACAAAGAGTCACATCGAACTCTTTTATTACCGAAGTTTATTGA
CGCGTATCGCGTTGACGATAGTTTCACTAAATTTGATCATTTTTGTTGCG
ATTCGTTACCTAGCTGTTACCAACATAGATTTTTATAGACGCATCAATCG
TAAGATATACATTCGAATTTGCATCGCAGCTTGGTGCTTAACATGCTTCA
TTGTGTTTGTATCACACTACCTTTTCGACGTCGATGTTCCCAATTACGAG
GAGTTTTTCACGCATTACGTGTCCTTTATAATCATTCCAGGAACAATAAT
CATCGTAGTTTTATACGGACGTATAATGTCAACCATACGCAGACAACAGA
ATCAATATTTTCTTCACACGTTTTACTGTAACTCGGAGAAATGTCGTAAT
TTAAGTAGCGCTAAACAAATACAAACCAAGCCGTTTCAGCGAATCGAGGA
AGAAATCGAACTACAATCGAAAATCCAATCCAATAAACAACATTCTATCA
TTGACTTAGCATATCAGAAACGTTTTAATAATCTTTTCGAGATTAAACTT
ATCAAACTTCTTGGTATTTTCATCGTTTTATTTGTGATTTGCTTGCTGCC
ACTTCCAACTTATTGTATAAACACTCAAAGCACCGGTCATGCTTTTAAAA
GCGACGGTGCTTTCAACCTATTGGTGAACTTGGCTTTCTCATACTGTTTG
CTTCAACCATTGTGTTATACAATCCATACCAAAACAGCGAAACGCAGACA
AACAAAAACAATCTCCAATGATTTGTATGGAGCATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086_pilon | genome | sc0000086_pilon:808791..812875 - |
|
