|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000086_pilon:127412..129784+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11721.1.p1 ID=MSTRG.11721.1.p1|Name=MSTRG.11721.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2373bp|location=Sequence derived from alignment at sc0000086_pilon:127412..129784+ (Clytia hemisphaerica_ch_hm2_pilon)
GGACAGGGTATGTATTTCACAAATGAagaaatatataaatttttgattca
aGTAAGGATAAAAGTGAATATACTGTAAAAATGGTGTTTCAACAAGTCAA
AGAAAATTGGATTAAAACATTTATTTGGTGGCTGATGTTTGGGCTTTTGA
CAAATGGTATTGAAGTTTTGTCCACAAAATGCAAAAAGAAGgtaaaaaga
gaaatattttctGCACCTAAACCACATCAATCCCTCATACTGATAAAAGG
AAAAAGCTTGGCTTCTAATTTTTAATCCTCCTCtttttcttaaaggtttt
atttttacataagtgttcccgtttcatcagacacatatttcatatcagga
cagtgtctgcctattgttattttatgcggatataagcaaaaagatgtttt
tcttttcctctttctgaccaatcttgctccacatccgtgtcaatccaatg
tgaacaAGTGATGCTTTTATGGAcatacctggttatgcatttaacacata
tataattgatatctatgtgagcgtgaccattaaaaaatcattcaaaacac
aaatagtgacagtaatttggctaagaacattgatgtatgcttattgatag
tgattcttatagataaacatgcgttttttgagctgaaaaattcttttttt
acaaaaatcagcttgagccatcttttacctatgatggtaccctactttca
tacaaaaaatcagaaaaaattaattattccatttttcacaaagtcaaaaa
aacccgttttttggcccaaatttccccaaaaattttttgcacctttgtac
caaaaatcaaaggattcctatgattcaatcctgagaaaagttggtaacag
acgaacgaacgaacgaacgaacgaacgaacggacggacggacgaacgaac
acaggttaatttataggacctctaccccaccggggtaggtccaaaaagct
tgtaaattaaagttgatgagtaagcaaacgatatcactcttatttaaaaa
caaaacctttgaatATAAGAAGGTTTGAACAGAAGAGAAAGTTTACGTGC
AACTATGTTAGAGTTCTTCTCACTTTGTGAAGTTCACATCATTTTATAGC
TCGGATATCTAAGTTTCCTTTTTAATAATCTAACTCATGCAGAATGCAAC
AATGATATATGAAACAAGCAGTATTGGTAAAAAAGTACTGTTTCTTTTAA
TTGTGAATTGACAATTTACAAGAATACAAGAATACAAGTCTAACAAGAAG
TTGCATGCATGTATGTTATTTCTAGATACCACCGAACAACCACGGAGTCA
TGCCTCAAACAATCATTCAAGGTAGCAGGTTTCTTTCCATAAAGTTCGTA
TATAATCTCAAACAGTACCATTGTGTTTACCGAAACACAATAGGAACTCA
AAACATTAGACAGTTTCCCATTAGGATGGTTTagacttttttacaagaac
atcttAGATTTTCGAAGCCTGTTCATAAATtctcaagcctaaaaatgttc
atagGATgttcataaaatgttcttaacttatgcTCAACATTTTGGtactc
gaagccttatgttcttatatagttgtCCTTACaaaaaaaCATCTGAGAGA
TACAGCAGCGTTTTTATTCACTTCGCATTTTTTGTTCACAGAAGAAGTAT
TAACAGTTGGCAACTTAAAAGGAGTGATCCCCGTCATATCACCCGAATAC
ATTGTCCAATTCACGTTCAAGCTGAATTCAGTCAATACTGTTGATCCGAC
GAAAATATGGTGCTCTCTCATTCATTTTACGGAAGGTGAAAATATCGGAG
CACCAGGAACCCGGATACCAGGAGTGTATATTCACTCTGGGGACGCCACA
ACTACCACCGGCCTGGCCATTCACGGAAACGTACCAACTATGCTTGCTTA
CAGCAAATATGATATTCAGATGAACAAAGCGTACGACGTAGAGATACGTC
AAAGATACGTAAGCGGAGGGTTGTACAGATATAGCGTCTCCGTAGACGGG
ATTGAAGAGCAATATCATAACAACTTCAACGCAACACAGTTCTACGACGT
TAAGATTTACGCCGGAGATCCCTGGCACCCGGTATGTGATGGAACCGTTA
GTcatctaaaaattacaaattttttgTAGACGCTAGTGTGAAATTATATG
acacagtttttattttttgagcacttttgagtcctagtacacgttttttt
atttaaggatatactttataagaatatttatgataagATAAAATATGATA
TGATAAAATTGGCCAATAAATTAAGACTATGCTAGGAAAGgataccacca
tcatggaattttacaactgaacctaagaatcaATGCCGATTTTTAGAGCA
TCTTACctgtaaattgtcaatta Coding sequence (CDS) from alignment at sc0000086_pilon:127412..129784+ >MSTRG.11721.1.p1 ID=MSTRG.11721.1.p1|Name=MSTRG.11721.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1935bp|location=Sequence derived from alignment at sc0000086_pilon:127412..129784+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGTTTCAACAAGTCAAAGAAAATTGGATTAAAACATTTATTTGGTG
GCTGATGTTTGGGCTTTTGACAAATGGTATTGAAGTTTTGTCCACAAAAT
GCAAAAAGAAGATACCACCGAACAACCACGGAGTCATGCCTCAAACAATC
ATTCAAGAAGAAGTATTAACAGTTGGCAACTTAAAAGGAGTGATCCCCGT
CATATCACCCGAATACATTGTCCAATTCACGTTCAAGCTGAATTCAGTCA
ATACTGTTGATCCGACGAAAATATGGTGCTCTCTCATTCATTTTACGGAA
GGTGAAAATATCGGAGCACCAGGAACCCGGATACCAGGAGTGTATATTCA
CTCTGGGGACGCCACAACTACCACCGGCCTGGCCATTCACGGAAACGTAC
CAACTATGCTTGCTTACAGCAAATATGATATTCAGATGAACAAAGCGTAC
GACGTAGAGATACGTCAAAGATACGTAAGCGGAGGGTTGTACAGATATAG
CGTCTCCGTAGACGGGATTGAAGAGCAATATCATAACAACTTCAACGCAA
CACAGTTCTACGACGTTAAGATTTACGCCGGAGATCCCTGGCACCCGGTA
TGTGATGGAACCGTTAGTcatctaaaaattacaaattttttgTAGATGGT
GTTTCAACAAGTCAAAGAAAATTGGATTAAAACATTTATTTGGTGGCTGA
TGTTTGGGCTTTTGACAAATGGTATTGAAGTTTTGTCCACAAAATGCAAA
AAGAAGATACCACCGAACAACCACGGAGTCATGCCTCAAACAATCATTCA
AGAAGAAGTATTAACAGTTGGCAACTTAAAAGGAGTGATCCCCGTCATAT
CACCCGAATACATTGTCCAATTCACGTTCAAGCTGAATTCAGTCAATACT
GTTGATCCGACGAAAATATGGTGCTCTCTCATTCATTTTACGGAAGGTGA
AAATATCGGAGCACCAGGAACCCGGATACCAGGAGTGTATATTCACTCTG
GGGACGCCACAACTACCACCGGCCTGGCCATTCACGGAAACGTACCAACT
ATGCTTGCTTACAGCAAATATGATATTCAGATGAACAAAGCGTACGACGT
AGAGATACGTCAAAGATACGTAAGCGGAGGGTTGTACAGATATAGCGTCT
CCGTAGACGGGATTGAAGAGCAATATCATAACAACTTCAACGCAACACAG
TTCTACGACGTTAAGATTTACGCCGGAGATCCCTGGCACCCGGTATGTGA
TGGAACCGTTAGTcatctaaaaattacaaattttttgTAGATGGTGTTTC
AACAAGTCAAAGAAAATTGGATTAAAACATTTATTTGGTGGCTGATGTTT
GGGCTTTTGACAAATGGTATTGAAGTTTTGTCCACAAAATGCAAAAAGAA
GATACCACCGAACAACCACGGAGTCATGCCTCAAACAATCATTCAAGAAG
AAGTATTAACAGTTGGCAACTTAAAAGGAGTGATCCCCGTCATATCACCC
GAATACATTGTCCAATTCACGTTCAAGCTGAATTCAGTCAATACTGTTGA
TCCGACGAAAATATGGTGCTCTCTCATTCATTTTACGGAAGGTGAAAATA
TCGGAGCACCAGGAACCCGGATACCAGGAGTGTATATTCACTCTGGGGAC
GCCACAACTACCACCGGCCTGGCCATTCACGGAAACGTACCAACTATGCT
TGCTTACAGCAAATATGATATTCAGATGAACAAAGCGTACGACGTAGAGA
TACGTCAAAGATACGTAAGCGGAGGGTTGTACAGATATAGCGTCTCCGTA
GACGGGATTGAAGAGCAATATCATAACAACTTCAACGCAACACAGTTCTA
CGACGTTAAGATTTACGCCGGAGATCCCTGGCACCCGGTATGTGATGGAA
CCGTTAGTcatctaaaaattacaaattttttgTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086_pilon | genome | sc0000086_pilon:127412..129784 + |
|
