MSTRG.11706.1.p1 (mRNA) -

Overview
NameMSTRG.11706.1.p1
Unique NameMSTRG.11706.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000085_pilon:1262761..1264531-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11706.1.p1 ID=MSTRG.11706.1.p1|Name=MSTRG.11706.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1771bp|location=Sequence derived from alignment at sc0000085_pilon:1262761..1264531- (Clytia hemisphaerica_ch_hm2_pilon)
GTAAACATTCCATTGAAAACGTTCGAAACGATCGTTTTTGCGTACACATC AATGTCAATCAAATTATTAACTCGCCAAGATTTCCTTTGCGAACCGGAAA GCGGTTGGTAGATTATTAAGCAGACCTATACTACCTGGGGTTTTGTAGAG GTCTGCGATTCAGACTAGCAAGAGTGTCGATCTAGGTCGTTTAGATGTCA ATGTCTTGCTAATTGGTTTTCTGGCTAATAAACATATCGAAAGATGGATT CTCAAGGAACTTTACAAGCGCCTTGATACAATAGTTGAACCACAGCTAGA AAATCAGATCAAAAAGCTTTTACCTAAACCAGGTCAAATTCAAGTTTCCA GTGCAGTGATGGGTCCATTGTCAAGCTCCTTGAATCAATGTAATAACCTC AATACAATCAGCGTTCAATTATCGAAAATCGGCAATGTGCTTCAGGCTGT ACCTCCACCCTTCGGCCCAAAAAAAATCGCATGTTCAGGGAATGGATTAA TCCAAAGAGTTCACGATGGCTGTTTGCACGATTACGGGATGAGTCGAAGC AGTGATCACTTAGAAGTGTATTGCTATAAGGGTGCAAAGCGATTCTGTCT ATCTGGCGAGTTGTGTCCTTGGAGAGGCTCTCAACCAGCTCAATGTTCAG CAATGTTTGCGCTTGCAACATGTTCCGTTGGAGGTTTGAGTAGCTCTGCC ATGGCAGTGACCTGGGGCCAAACAAGATCATGTTGGAGAAGTTGCAGTGG ATGGTGGATTTTTCGTCGCTGTAGATGGAATTGCAGATGTAGCGGACCCA GATTTCGTGTCAATTGCAATACTGGTTCTGCTACTGTGAGTTATTATTGA GAATGAACTCTCCGTGAAATTTCATTATGTTATGATTCGATCTTTAAATA TTTCAATCATTTTACTTCGTTTAATTTGCTAGGGTTTGATGAGTTTTTTT TTATTTTATTAATGAAGTTTGTTGAATGTTTTGAATACCTCTTCAGAAGA TCAACGCAGTGTTATCGGGTTCACGAACCTAGAAAAATGAAGAGAGATTT TCAACAATTTATCAACAAGTTATAAACTATTGTAAAGTATTATTAAATGA CCAAGAATGTATTAGTGGAACCTCCAACTGTTCGAATTATACGAAGACTG TTTTAAAAGGGTTTATTGACTTCAGGGAAGAAAAGAGGTATATTCGGCTA TTGGAAATTCCACTGTAGTAAATTTTTGCCTTGTATTTTAAGTTTTTCTT AGGGTTGCATATGAATGCAGAAAACATTATTATTTTAAGAAAATTAAATT GTAAATATTACGTATGTCAAACACTCGTTAGGAGCAGAGACCTTGAATCT TTGGTGAAAAGCACCAAAATTCGACTTAAAAACTACCCAAGGCTCTTTAT TGTTCTTGACAGCTTTATTGAGACAGATTATTTGTCACATGTTGTTTAAC CACTTGATTGTCTAATTTATCATGTAATACTTAAATTTATTTTGACAATA AAATTTCATACACTTGACAATCAACTTCTTAATTTTTTTTTGAGACTGTG GCATCTAAAATATTTCACGCTCGAATATTTTGCGTAATAGCTCAATTTGA AATATTTTTTTCTGGTACGTCAATTTTTTGACACGTCAAGCCTCTATTTT TAACTTCTCCCTCCCAGGTAGTTGAAACACAAAGTTAAAAACTGGGGTCC TCGAAGAGAAAAAATGGATAATTTTGGTAATTTCAATCCTATTTAAGGTC ACCTGTTTCGCAAATTTTGCA

Coding sequence (CDS) from alignment at sc0000085_pilon:1262761..1264531-

>MSTRG.11706.1.p1 ID=MSTRG.11706.1.p1|Name=MSTRG.11706.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=492bp|location=Sequence derived from alignment at sc0000085_pilon:1262761..1264531- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTCCATTGTCAAGCTCCTTGAATCAATGTAATAACCTCAATACAAT
CAGCGTTCAATTATCGAAAATCGGCAATGTGCTTCAGGCTGTACCTCCAC
CCTTCGGCCCAAAAAAAATCGCATGTTCAGGGAATGGATTAATCCAAAGA
GTTCACGATGGCTGTTTGCACGATTACGGGATGAGTCGAAGCAGTGATCA
CTTAGAAGTGTATTGCTATAAGGGTGCAAAGCGATTCTGTCTATCTGGCG
AGTTGTGTCCTTGGAGAGGCTCTCAACCAGCTCAATGTTCAGCAATGTTT
GCGCTTGCAACATGTTCCGTTGGAGGTTTGAGTAGCTCTGCCATGGCAGT
GACCTGGGGCCAAACAAGATCATGTTGGAGAAGTTGCAGTGGATGGTGGA
TTTTTCGTCGCTGTAGATGGAATTGCAGATGTAGCGGACCCAGATTTCGT
GTCAATTGCAATACTGGTTCTGCTACTGTGAGTTATTATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11706MSTRG.11706Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11706.1.p1.exon1MSTRG.11706.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11706.1.p1MSTRG.11706.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085_pilongenomesc0000085_pilon:1262761..1264531 -