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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:875494..878764+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11679.24.p1 ID=MSTRG.11679.24.p1|Name=MSTRG.11679.24.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3271bp|location=Sequence derived from alignment at sc0000085_pilon:875494..878764+ (Clytia hemisphaerica_ch_hm2_pilon)
TTccagctacagaagaagcagctccagcaccagctacagaagaagcagca
ccagcaccagctacagaagaagcagccccagcaccggctacagaagaagc
agGTCCTGGGCCTGATACTGAAGAAGCAGCACCTGAGCCTGCTACTGAAG
AAGTGGCACCAGCACCAGCTACTGAAGAAGCCGCTCCAGCACCAGCTACA
GAAGAAGCAGCTCCTGGGCCTGCTACTGAAGAAGTGGCACCAGCACCAGC
TACAGAAGAAACAGCTCCTGGGCCTGATACTGAAGAAGCAGCACCTGAGC
CTGCTACAGAAGAAGCAGCTCCTGAGCCTGCTACTGAAGAAGTGGCACCA
GCACCAGCACCAGCTACAGAAGAAGCAGCTCCTAGGCCTGATACTGAAGA
AGCAGCTCCTGAACCTGCTACAAAAGAAGCAGCTCCTGAGCCTGCTACTG
AAGAAGTGGCACCAGCACCAGCTACAGAAGAAGCGGCTCCAGCACCAGCT
ACTGAAGAGGCAGCTCCTGGGCCTGCTACTGAAGAAGTGGCACCAGCACC
AGCTATAGAAGAAGTGGCTCCAGCACCAGCTACTGAAGAAGCAGCTCCTG
AGCCTGCTACTGAAGAAGTGGCACCAGCACCAGCTATAGAAGAAGTGGCT
CCAGCACCAGCTACTGAAGAAGCAGCTCCTGAGCCTGCTACTGAAGAAGT
GGCACCAGCACCAGCTACAGAAGAAACAGCTCCTGGGCCTGATACTGAAG
AAGCAGCACCTGAGCCTGCTACAGAAGAAGCAGCTCCTGAGCCTGCTACT
GAAGAAGTGGCACCAGCACCAGCTACAGAAGAAGCAGCCCCAGCACCGGC
TACTGAAGAGGCAGCTCCTGAGCCTGCTACTGAAGAAGCGGCCCCAGTAC
CAATTACTGAAGAGgcagccccagcaccagcaacagaagaagcagctcca
gcaccagctacagaagaagcagcTCCTGCGCCTGCTACTAAAGAAGCAGC
TACAGAAGAAGTAGCACCAGCACCAGCAACAGAAGAAGCAGCCCCAGCAC
TAGCTACAGAAGAAGCAGCTCCTGAGCCTGCTACTGAAGAAGTAGCACTA
GTAAaagctacagaagaagcagcaacagaagaaacagcaccagcaccagc
tgcagaagaagcagctccagcaccaacaacagaagaagcagccccagcac
cagcTTCAGAAGAAGCAGCTCCTGAGCCTGCTACTGAAGAAGTGTCACCA
GCACCAGCTACACAAGAAGCGGCTccagcaccagctacagaagaagcagc
cccagcaccagcaacagaagaagcaaccccagcaccagctacagaagaag
cagcTATagaagaagtagcaccagcaccagcaacagaagaagcagcccca
gcaccagctacagaagaagcagcTCCTGCACCAGCTACAGAAGAAGCAGC
TCCTGAGCCTGCTACTGAAGAAGTAGCACCAGTACCAGCTACAGAAGAAG
TGGCTCCTGAACCTGCTACTGAAGAAGCAGCCCCAGCACCAGCTACAGAA
GAAGCAGCTCCTGAGCCTGCTACTCaagaagtagcaccagcaccagctac
agaagaagcagctccagcaccagcaacagaagaagcagccccagcaccag
ctacagaagaagcagcTCCTGAGCCTGCTACTgaagaagcagccccagca
ccagctacagaagaagcagccccagcaccagctacagaagaagcagcTCC
TGAGCCTGCTACTGAAGAAGTAGCACCAGTACCAGCTACTGAAGAGGCAG
CTCCAACACTAGCTGCAGAAGAAGTCGCTTCAGAAAAAGTCCCATGTGAA
TTAGTTGAAACGAAAATTCAAACCCATACAGCAGTAGAAGAAGCGGTAGA
AGAGTTTGTGGAATCTTGCAAAGTGGTTGCCGTAGAAAATGCACCAACAA
GTGATGTTATTGACGAAGGTGAGTCATAAGGGACACTTTATTCGTTTCCT
TTGTTTAATTTGACTTGtctaattgaattttgattacCAATATGGGAAAG
AGCTGTTCTcttgttctttcatttttcatatcttaaaaatctgaccaatc
tttcttttttacCCTGTATAAGAGTAACTTTGTACAACGATACTTTCCTT
TAGAATCGGTAGAGATGGACAAAGACCAATCAGAGGATATTGAGGAGATG
AAACAGAAAAGCGACGAAATAGAGAAAGAATATTCACATCTGAAAGGTAG
ACTCGAGAAGATCGAGAAAGAatattctgaattgaaagacaaaaaagata
aaattaaaCAAGAGAAGTCCGAACTAAAGGACCATAATGAACAATTAGAG
GCTAAAATAAAAGCCTTAGAAATAATGATGTCAGGAACTTTAGATGCGAA
TAATAACCCAGACGAAACAAGTGCCCAATATGACACATTGTCTAACACAT
GTGCCGAACTTGAGGGTGagataagaaaattaaaattgaggGTGTTAGTG
CGAGATACGGAGGTCGAACGATTGAAGGGATATTTAGAGGATGTTTTTAA
GAAAACGAAGAAAGGGAAGTCAGGTCATCGACGAACGAAACGTATCTTGT
ATGATGAGAAGAAACAACACCCTGGTGCCATGATGTTGAACAATAAACGA
AAGTCAGCATCGATGAGTAATATTCTTGATGGTTGAGAGATGGTAGAGAT
AATTCATTCTTGACGTCAATGTTTTTCCATTAGGGAAAAATGTCATTATC
AAATATTGCAAAATTTAAATACTTGATTGATTTCAATCGAAATGTATATT
AATTTTAATCATTAATTTGTATTTAAAATCAGGCTAGGAATAGACTACTA
ACTGAGGCGtttttttCAGGACCAATGATTTCTTATCAGTTCTTGACTTA
GAGGGAGCTGGcgaaaaaacttttcgaaagcGGATCTCACATACTTTGAA
CCCTCCTATTTCCGCCGCTACGATGGCTAGAGAAAAGGATTACAATGAAA
TTGAACCGATAAATTGTTGAGTGATTTAgctaaaaaagataaaagggtCT
TTTCTTTTTGAGGACATGAGAATTTGAATTTGTGAAAGcaaattttagtg
aattttAGTTAATATCGCAAAAATCAGCCGACGGTCTATTATTAGTTAAG
TGGCCACTTTTGTATAAATTATGCTAAATATTATGAAATTATTGTGTATT
AAGCTAACTTTTGTACTAggtaaagtaaaaatatttaaaaaggaCTGGTT
TGAAGACcagaaaaagtaaaa Coding sequence (CDS) from alignment at sc0000085_pilon:875494..878764+ >MSTRG.11679.24.p1 ID=MSTRG.11679.24.p1|Name=MSTRG.11679.24.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5373bp|location=Sequence derived from alignment at sc0000085_pilon:875494..878764+ (Clytia hemisphaerica_ch_hm2_pilon)
ccagctacagaagaagcagctccagcaccagctacagaagaagcagcacc
agcaccagctacagaagaagcagccccagcaccggctacagaagaagcag
GTCCTGGGCCTGATACTGAAGAAGCAGCACCTGAGCCTGCTACTGAAGAA
GCAGCTCCTGAGCCTGCTACTGAAGAAGCGGCCCCAGTACCAATTACTGA
AGAGgcagccccagcaccagcaacagaagaagcagctccagcaccagcta
cagaagaagcagcTCCTGCGCCTGCTACTAAAGAAGCAGCTACAGAAGAA
GTAGCACCAGCACCAGCAACAGAAGAAGCAGCCCCAGCACTAGCTACAGA
AGAAGCAGCTCCTGAGCCTGCTACTGAAGAAGTAGCACTAGTAAaagcta
cagaagaagcagcaacagaagaaacagcaccagcaccagctgcagaagaa
gcagctccagcaccaacaacagaagaagcagccccagcaccagcTTCAGA
AGAAGCAGCTCCTGAGCCTGCTACTGAAGAAGTGTCACCAGCACCAGCTA
CACAAGAAGCGGCTccagcaccagctacagaagaagcagccccagcacca
gcaacagaagaagcaaccccagcaccagctacagaagaagcagcTATaga
agaagtagcaccagcaccagcaacagaagaagcagccccagcaccagcta
cagaagaagcagcTCCTGCACCAGCTACAGAAGAAGCAGCTCCTGAGCCT
GCTACTGAAGAAGTAGCACCAGTACCAGCTACAGAAGAAGTGGCTCCTGA
ACCTGCTACTGAAGAAGCAGCCCCAGCACCAGCTACAGAAGAAGCAGCTC
CTGAGCCTGCTACTCaagaagtagcaccagcaccagctacagaagaagca
gctccagcaccagcaacagaagaagcagccccagcaccagctacagaaga
agcagcTCCTGAGCCTGCTACTgaagaagcagccccagcaccagctacag
aagaagcagccccagcaccagctacagaagaagcagcTCCTGAGCCTGCT
ACTGAAGAAGTAGCACCAGTACCAGCTACTGAAGAGGCAGCTCCAACACT
AGCTGCAGAAGAAGTCGCTTCAGAAAAAGTCCCATGTGAATTAGTTGAAA
CGAAAATTCAAACCCATACAGCAGTAGAAGAAGCGGTAGAAGAGTTTGTG
GAATCTTGCAAAGTGGTTGCCGTAGAAAATGCACCAACAAGTGATGTTAT
TGACGAAGAATCGGTAGAGATGGACAAAGACCAATCAGAGGATATTGAGG
AGATGAAACAGAAAAGCGACGAAATAGAGAAAGAATATTCACATCTGAAA
GGTAGACTCGAGAAGATCGAGAAAGAatattctgaattgaaagacaaaaa
agataaaattaaaCAAGAGAAGTCCGAACTAAAGGACCATAATGAACAAT
TAGAGGCTAAAATAAAAGCCTTAGAAATAATGATGTCAGGAACTTTAGAT
GCGAATAATAACCCAGACGAAACAAGTGCCCAATATGACACATTGTCTAA
CACATGTGCCGAACTTGAGGGTGagataagaaaattaaaattgaggGTGT
TAGTGCGAGATACGGAGGTCGAACGATTGAAGGGATATTTAGAGGATGTT
TTTAAGAAAACGAAGAAAGGGAAGTCAGGTCATCGACGAACGAAACGTAT
CTTGTATGATGAGAAGAAACAACACCCTGGTGCCATGATGTTGAACAATA
AACGAAAGTCAGCATCGATGAGTAATATTCTTGATGGTTGAccagctaca
gaagaagcagctccagcaccagctacagaagaagcagcaccagcaccagc
tacagaagaagcagccccagcaccggctacagaagaagcagGTCCTGGGC
CTGATACTGAAGAAGCAGCACCTGAGCCTGCTACTGAAGAAGCAGCTCCT
GAGCCTGCTACTGAAGAAGCGGCCCCAGTACCAATTACTGAAGAGgcagc
cccagcaccagcaacagaagaagcagctccagcaccagctacagaagaag
cagcTCCTGCGCCTGCTACTAAAGAAGCAGCTACAGAAGAAGTAGCACCA
GCACCAGCAACAGAAGAAGCAGCCCCAGCACTAGCTACAGAAGAAGCAGC
TCCTGAGCCTGCTACTGAAGAAGTAGCACTAGTAAaagctacagaagaag
cagcaacagaagaaacagcaccagcaccagctgcagaagaagcagctcca
gcaccaacaacagaagaagcagccccagcaccagcTTCAGAAGAAGCAGC
TCCTGAGCCTGCTACTGAAGAAGTGTCACCAGCACCAGCTACACAAGAAG
CGGCTccagcaccagctacagaagaagcagccccagcaccagcaacagaa
gaagcaaccccagcaccagctacagaagaagcagcTATagaagaagtagc
accagcaccagcaacagaagaagcagccccagcaccagctacagaagaag
cagcTCCTGCACCAGCTACAGAAGAAGCAGCTCCTGAGCCTGCTACTGAA
GAAGTAGCACCAGTACCAGCTACAGAAGAAGTGGCTCCTGAACCTGCTAC
TGAAGAAGCAGCCCCAGCACCAGCTACAGAAGAAGCAGCTCCTGAGCCTG
CTACTCaagaagtagcaccagcaccagctacagaagaagcagctccagca
ccagcaacagaagaagcagccccagcaccagctacagaagaagcagcTCC
TGAGCCTGCTACTgaagaagcagccccagcaccagctacagaagaagcag
ccccagcaccagctacagaagaagcagcTCCTGAGCCTGCTACTGAAGAA
GTAGCACCAGTACCAGCTACTGAAGAGGCAGCTCCAACACTAGCTGCAGA
AGAAGTCGCTTCAGAAAAAGTCCCATGTGAATTAGTTGAAACGAAAATTC
AAACCCATACAGCAGTAGAAGAAGCGGTAGAAGAGTTTGTGGAATCTTGC
AAAGTGGTTGCCGTAGAAAATGCACCAACAAGTGATGTTATTGACGAAGA
ATCGGTAGAGATGGACAAAGACCAATCAGAGGATATTGAGGAGATGAAAC
AGAAAAGCGACGAAATAGAGAAAGAATATTCACATCTGAAAGGTAGACTC
GAGAAGATCGAGAAAGAatattctgaattgaaagacaaaaaagataaaat
taaaCAAGAGAAGTCCGAACTAAAGGACCATAATGAACAATTAGAGGCTA
AAATAAAAGCCTTAGAAATAATGATGTCAGGAACTTTAGATGCGAATAAT
AACCCAGACGAAACAAGTGCCCAATATGACACATTGTCTAACACATGTGC
CGAACTTGAGGGTGagataagaaaattaaaattgaggGTGTTAGTGCGAG
ATACGGAGGTCGAACGATTGAAGGGATATTTAGAGGATGTTTTTAAGAAA
ACGAAGAAAGGGAAGTCAGGTCATCGACGAACGAAACGTATCTTGTATGA
TGAGAAGAAACAACACCCTGGTGCCATGATGTTGAACAATAAACGAAAGT
CAGCATCGATGAGTAATATTCTTGATGGTTGAccagctacagaagaagca
gctccagcaccagctacagaagaagcagcaccagcaccagctacagaaga
agcagccccagcaccggctacagaagaagcagGTCCTGGGCCTGATACTG
AAGAAGCAGCACCTGAGCCTGCTACTGAAGAAGCAGCTCCTGAGCCTGCT
ACTGAAGAAGCGGCCCCAGTACCAATTACTGAAGAGgcagccccagcacc
agcaacagaagaagcagctccagcaccagctacagaagaagcagcTCCTG
CGCCTGCTACTAAAGAAGCAGCTACAGAAGAAGTAGCACCAGCACCAGCA
ACAGAAGAAGCAGCCCCAGCACTAGCTACAGAAGAAGCAGCTCCTGAGCC
TGCTACTGAAGAAGTAGCACTAGTAAaagctacagaagaagcagcaacag
aagaaacagcaccagcaccagctgcagaagaagcagctccagcaccaaca
acagaagaagcagccccagcaccagcTTCAGAAGAAGCAGCTCCTGAGCC
TGCTACTGAAGAAGTGTCACCAGCACCAGCTACACAAGAAGCGGCTccag
caccagctacagaagaagcagccccagcaccagcaacagaagaagcaacc
ccagcaccagctacagaagaagcagcTATagaagaagtagcaccagcacc
agcaacagaagaagcagccccagcaccagctacagaagaagcagcTCCTG
CACCAGCTACAGAAGAAGCAGCTCCTGAGCCTGCTACTGAAGAAGTAGCA
CCAGTACCAGCTACAGAAGAAGTGGCTCCTGAACCTGCTACTGAAGAAGC
AGCCCCAGCACCAGCTACAGAAGAAGCAGCTCCTGAGCCTGCTACTCaag
aagtagcaccagcaccagctacagaagaagcagctccagcaccagcaaca
gaagaagcagccccagcaccagctacagaagaagcagcTCCTGAGCCTGC
TACTgaagaagcagccccagcaccagctacagaagaagcagccccagcac
cagctacagaagaagcagcTCCTGAGCCTGCTACTGAAGAAGTAGCACCA
GTACCAGCTACTGAAGAGGCAGCTCCAACACTAGCTGCAGAAGAAGTCGC
TTCAGAAAAAGTCCCATGTGAATTAGTTGAAACGAAAATTCAAACCCATA
CAGCAGTAGAAGAAGCGGTAGAAGAGTTTGTGGAATCTTGCAAAGTGGTT
GCCGTAGAAAATGCACCAACAAGTGATGTTATTGACGAAGAATCGGTAGA
GATGGACAAAGACCAATCAGAGGATATTGAGGAGATGAAACAGAAAAGCG
ACGAAATAGAGAAAGAATATTCACATCTGAAAGGTAGACTCGAGAAGATC
GAGAAAGAatattctgaattgaaagacaaaaaagataaaattaaaCAAGA
GAAGTCCGAACTAAAGGACCATAATGAACAATTAGAGGCTAAAATAAAAG
CCTTAGAAATAATGATGTCAGGAACTTTAGATGCGAATAATAACCCAGAC
GAAACAAGTGCCCAATATGACACATTGTCTAACACATGTGCCGAACTTGA
GGGTGagataagaaaattaaaattgaggGTGTTAGTGCGAGATACGGAGG
TCGAACGATTGAAGGGATATTTAGAGGATGTTTTTAAGAAAACGAAGAAA
GGGAAGTCAGGTCATCGACGAACGAAACGTATCTTGTATGATGAGAAGAA
ACAACACCCTGGTGCCATGATGTTGAACAATAAACGAAAGTCAGCATCGA
TGAGTAATATTCTTGATGGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085_pilon | genome | sc0000085_pilon:875494..878764 + |
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