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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000085_pilon:875494..878764+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11679.23.p1 ID=MSTRG.11679.23.p1|Name=MSTRG.11679.23.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3271bp|location=Sequence derived from alignment at sc0000085_pilon:875494..878764+ (Clytia hemisphaerica_ch_hm2_pilon)
TTccagctacagaagaagcagctccagcaccagctacagaagaagcagca
ccagcaccagctacagaagaagcagccccagcaccggctacagaagaagc
agGTCCTGGGCCTGATACTGAAGAAGCAGCACCTGAGCCTGCTACTGAAG
AAGTGGCACCAGCACCAGCTACTGAAGAAGCCGCTCCAGCACCAGCTACA
GAAGAAGCAGCTCCTGGGCCTGCTACTGAAGAAGTGGCACCAGCACCAGC
TACAGAAGAAACAGCTCCTGGGCCTGATACTGAAGAAGCAGCACCTGAGC
CTGCTACAGAAGAAGCAGCTCCTGAGCCTGCTACTGAAGAAGTGGCACCA
GCACCAGCACCAGCTACAGAAGAAGCAGCTCCTAGGCCTGATACTGAAGA
AGCAGCTCCTGAACCTGCTACAAAAGAAGCAGCTCCTGAGCCTGCTACTG
AAGAAGTGGCACCAGCACCAGCTACAGAAGAAGCGGCTCCAGCACCAGCT
ACTGAAGAGGCAGCTCCTGGGCCTGCTACTGAAGAAGTGGCACCAGCACC
AGCTATAGAAGAAGTGGCTCCAGCACCAGCTACTGAAGAAGCAGCTCCTG
AGCCTGCTACTGAAGAAGTGGCACCAGCACCAGCTATAGAAGAAGTGGCT
CCAGCACCAGCTACTGAAGAAGCAGCTCCTGAGCCTGCTACTGAAGAAGT
GGCACCAGCACCAGCTACAGAAGAAACAGCTCCTGGGCCTGATACTGAAG
AAGCAGCACCTGAGCCTGCTACAGAAGAAGCAGCTCCTGAGCCTGCTACT
GAAGAAGTGGCACCAGCACCAGCTACAGAAGAAGCAGCCCCAGCACCGGC
TACTGAAGAGGCAGCTCCTGAGCCTGCTACTGAAGAAGCGGCCCCAGTAC
CAATTACTGAAGAGgcagccccagcaccagcaacagaagaagcagctcca
gcaccagctacagaagaagcagcTCCTGCGCCTGCTACTAAAGAAGCAGC
TACAGAAGAAGTAGCACCAGCACCAGCAACAGAAGAAGCAGCCCCAGCAC
TAGCTACAGAAGAAGCAGCTCCTGAGCCTGCTACTGAAGAAGTAGCACTA
GTAAaagctacagaagaagcagcaacagaagaaacagcaccagcaccagc
tgcagaagaagcagctccagcaccaacaacagaagaagcagccccagcac
cagcTTCAGAAGAAGCAGCTCCTGAGCCTGCTACTGAAGAAGTGTCACCA
GCACCAGCTACACAAGAAGCGGCTccagcaccagctacagaagaagcagc
cccagcaccagcaacagaagaagcaaccccagcaccagctacagaagaag
cagcTATagaagaagtagcaccagcaccagcaacagaagaagcagcccca
gcaccagctacagaagaagcagcTCCTGCACCAGCTACAGAAGAAGCAGC
TCCTGAGCCTGCTACTGAAGAAGTAGCACCAGTACCAGCTACAGAAGAAG
TGGCTCCTGAACCTGCTACTGAAGAAGCAGCCCCAGCACCAGCTACAGAA
GAAGCAGCTCCTGAGCCTGCTACTCaagaagtagcaccagcaccagctac
agaagaagcagctccagcaccagcaacagaagaagcagccccagcaccag
ctacagaagaagcagcTCCTGAGCCTGCTACTgaagaagcagccccagca
ccagctacagaagaagcagccccagcaccagctacagaagaagcagcTCC
TGAGCCTGCTACTGAAGAAGTAGCACCAGTACCAGCTACTGAAGAGGCAG
CTCCAACACTAGCTGCAGAAGAAGTCGCTTCAGAAAAAGTCCCATGTGAA
TTAGTTGAAACGAAAATTCAAACCCATACAGCAGTAGAAGAAGCGGTAGA
AGAGTTTGTGGAATCTTGCAAAGTGGTTGCCGTAGAAAATGCACCAACAA
GTGATGTTATTGACGAAGGTGAGTCATAAGGGACACTTTATTCGTTTCCT
TTGTTTAATTTGACTTGtctaattgaattttgattacCAATATGGGAAAG
AGCTGTTCTcttgttctttcatttttcatatcttaaaaatctgaccaatc
tttcttttttacCCTGTATAAGAGTAACTTTGTACAACGATACTTTCCTT
TAGAATCGGTAGAGATGGACAAAGACCAATCAGAGGATATTGAGGAGATG
AAACAGAAAAGCGACGAAATAGAGAAAGAATATTCACATCTGAAAGGTAG
ACTCGAGAAGATCGAGAAAGAatattctgaattgaaagacaaaaaagata
aaattaaaCAAGAGAAGTCCGAACTAAAGGACCATAATGAACAATTAGAG
GCTAAAATAAAAGCCTTAGAAATAATGATGTCAGGAACTTTAGATGCGAA
TAATAACCCAGACGAAACAAGTGCCCAATATGACACATTGTCTAACACAT
GTGCCGAACTTGAGGGTGagataagaaaattaaaattgaggGTGTTAGTG
CGAGATACGGAGGTCGAACGATTGAAGGGATATTTAGAGGATGTTTTTAA
GAAAACGAAGAAAGGGAAGTCAGGTCATCGACGAACGAAACGTATCTTGT
ATGATGAGAAGAAACAACACCCTGGTGCCATGATGTTGAACAATAAACGA
AAGTCAGCATCGATGAGTAATATTCTTGATGGTTGAGAGATGGTAGAGAT
AATTCATTCTTGACGTCAATGTTTTTCCATTAGGGAAAAATGTCATTATC
AAATATTGCAAAATTTAAATACTTGATTGATTTCAATCGAAATGTATATT
AATTTTAATCATTAATTTGTATTTAAAATCAGGCTAGGAATAGACTACTA
ACTGAGGCGtttttttCAGGACCAATGATTTCTTATCAGTTCTTGACTTA
GAGGGAGCTGGcgaaaaaacttttcgaaagcGGATCTCACATACTTTGAA
CCCTCCTATTTCCGCCGCTACGATGGCTAGAGAAAAGGATTACAATGAAA
TTGAACCGATAAATTGTTGAGTGATTTAgctaaaaaagataaaagggtCT
TTTCTTTTTGAGGACATGAGAATTTGAATTTGTGAAAGcaaattttagtg
aattttAGTTAATATCGCAAAAATCAGCCGACGGTCTATTATTAGTTAAG
TGGCCACTTTTGTATAAATTATGCTAAATATTATGAAATTATTGTGTATT
AAGCTAACTTTTGTACTAggtaaagtaaaaatatttaaaaaggaCTGGTT
TGAAGACcagaaaaagtaaaa Coding sequence (CDS) from alignment at sc0000085_pilon:875494..878764+ >MSTRG.11679.23.p1 ID=MSTRG.11679.23.p1|Name=MSTRG.11679.23.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4761bp|location=Sequence derived from alignment at sc0000085_pilon:875494..878764+ (Clytia hemisphaerica_ch_hm2_pilon)
ccagctacagaagaagcagctccagcaccagctacagaagaagcagcacc
agcaccagctacagaagaagcagccccagcaccggctacagaagaagcag
CACCAGCACCAGCAACAGAAGAAGCAGCCCCAGCACTAGCTACAGAAGAA
GCAGCTCCTGAGCCTGCTACTGAAGAAGTAGCACTAGTAAaagctacaga
agaagcagcaacagaagaaacagcaccagcaccagctgcagaagaagcag
ctccagcaccaacaacagaagaagcagccccagcaccagcTTCAGAAGAA
GCAGCTCCTGAGCCTGCTACTGAAGAAGTGTCACCAGCACCAGCTACACA
AGAAGCGGCTccagcaccagctacagaagaagcagccccagcaccagcaa
cagaagaagcaaccccagcaccagctacagaagaagcagcTATagaagaa
gtagcaccagcaccagcaacagaagaagcagccccagcaccagctacaga
agaagcagcTCCTGCACCAGCTACAGAAGAAGCAGCTCCTGAGCCTGCTA
CTGAAGAAGTAGCACCAGTACCAGCTACAGAAGAAGTGGCTCCTGAACCT
GCTACTGAAGAAGCAGCCCCAGCACCAGCTACAGAAGAAGCAGCTCCTGA
GCCTGCTACTCaagaagtagcaccagcaccagctacagaagaagcagctc
cagcaccagcaacagaagaagcagccccagcaccagctacagaagaagca
gcTCCTGAGCCTGCTACTgaagaagcagccccagcaccagctacagaaga
agcagccccagcaccagctacagaagaagcagcTCCTGAGCCTGCTACTG
AAGAAGTAGCACCAGTACCAGCTACTGAAGAGGCAGCTCCAACACTAGCT
GCAGAAGAAGTCGCTTCAGAAAAAGTCCCATGTGAATTAGTTGAAACGAA
AATTCAAACCCATACAGCAGTAGAAGAAGCGGTAGAAGAGTTTGTGGAAT
CTTGCAAAGTGGTTGCCGTAGAAAATGCACCAACAAGTGATGTTATTGAC
GAAGAATCGGTAGAGATGGACAAAGACCAATCAGAGGATATTGAGGAGAT
GAAACAGAAAAGCGACGAAATAGAGAAAGAATATTCACATCTGAAAGGTA
GACTCGAGAAGATCGAGAAAGAatattctgaattgaaagacaaaaaagat
aaaattaaaCAAGAGAAGTCCGAACTAAAGGACCATAATGAACAATTAGA
GGCTAAAATAAAAGCCTTAGAAATAATGATGTCAGGAACTTTAGATGCGA
ATAATAACCCAGACGAAACAAGTGCCCAATATGACACATTGTCTAACACA
TGTGCCGAACTTGAGGGTGagataagaaaattaaaattgaggGTGTTAGT
GCGAGATACGGAGGTCGAACGATTGAAGGGATATTTAGAGGATGTTTTTA
AGAAAACGAAGAAAGGGAAGTCAGGTCATCGACGAACGAAACGTATCTTG
TATGATGAGAAGAAACAACACCCTGGTGCCATGATGTTGAACAATAAACG
AAAGTCAGCATCGATGAGTAATATTCTTGATGGTTGAccagctacagaag
aagcagctccagcaccagctacagaagaagcagcaccagcaccagctaca
gaagaagcagccccagcaccggctacagaagaagcagCACCAGCACCAGC
AACAGAAGAAGCAGCCCCAGCACTAGCTACAGAAGAAGCAGCTCCTGAGC
CTGCTACTGAAGAAGTAGCACTAGTAAaagctacagaagaagcagcaaca
gaagaaacagcaccagcaccagctgcagaagaagcagctccagcaccaac
aacagaagaagcagccccagcaccagcTTCAGAAGAAGCAGCTCCTGAGC
CTGCTACTGAAGAAGTGTCACCAGCACCAGCTACACAAGAAGCGGCTcca
gcaccagctacagaagaagcagccccagcaccagcaacagaagaagcaac
cccagcaccagctacagaagaagcagcTATagaagaagtagcaccagcac
cagcaacagaagaagcagccccagcaccagctacagaagaagcagcTCCT
GCACCAGCTACAGAAGAAGCAGCTCCTGAGCCTGCTACTGAAGAAGTAGC
ACCAGTACCAGCTACAGAAGAAGTGGCTCCTGAACCTGCTACTGAAGAAG
CAGCCCCAGCACCAGCTACAGAAGAAGCAGCTCCTGAGCCTGCTACTCaa
gaagtagcaccagcaccagctacagaagaagcagctccagcaccagcaac
agaagaagcagccccagcaccagctacagaagaagcagcTCCTGAGCCTG
CTACTgaagaagcagccccagcaccagctacagaagaagcagccccagca
ccagctacagaagaagcagcTCCTGAGCCTGCTACTGAAGAAGTAGCACC
AGTACCAGCTACTGAAGAGGCAGCTCCAACACTAGCTGCAGAAGAAGTCG
CTTCAGAAAAAGTCCCATGTGAATTAGTTGAAACGAAAATTCAAACCCAT
ACAGCAGTAGAAGAAGCGGTAGAAGAGTTTGTGGAATCTTGCAAAGTGGT
TGCCGTAGAAAATGCACCAACAAGTGATGTTATTGACGAAGAATCGGTAG
AGATGGACAAAGACCAATCAGAGGATATTGAGGAGATGAAACAGAAAAGC
GACGAAATAGAGAAAGAATATTCACATCTGAAAGGTAGACTCGAGAAGAT
CGAGAAAGAatattctgaattgaaagacaaaaaagataaaattaaaCAAG
AGAAGTCCGAACTAAAGGACCATAATGAACAATTAGAGGCTAAAATAAAA
GCCTTAGAAATAATGATGTCAGGAACTTTAGATGCGAATAATAACCCAGA
CGAAACAAGTGCCCAATATGACACATTGTCTAACACATGTGCCGAACTTG
AGGGTGagataagaaaattaaaattgaggGTGTTAGTGCGAGATACGGAG
GTCGAACGATTGAAGGGATATTTAGAGGATGTTTTTAAGAAAACGAAGAA
AGGGAAGTCAGGTCATCGACGAACGAAACGTATCTTGTATGATGAGAAGA
AACAACACCCTGGTGCCATGATGTTGAACAATAAACGAAAGTCAGCATCG
ATGAGTAATATTCTTGATGGTTGAccagctacagaagaagcagctccagc
accagctacagaagaagcagcaccagcaccagctacagaagaagcagccc
cagcaccggctacagaagaagcagCACCAGCACCAGCAACAGAAGAAGCA
GCCCCAGCACTAGCTACAGAAGAAGCAGCTCCTGAGCCTGCTACTGAAGA
AGTAGCACTAGTAAaagctacagaagaagcagcaacagaagaaacagcac
cagcaccagctgcagaagaagcagctccagcaccaacaacagaagaagca
gccccagcaccagcTTCAGAAGAAGCAGCTCCTGAGCCTGCTACTGAAGA
AGTGTCACCAGCACCAGCTACACAAGAAGCGGCTccagcaccagctacag
aagaagcagccccagcaccagcaacagaagaagcaaccccagcaccagct
acagaagaagcagcTATagaagaagtagcaccagcaccagcaacagaaga
agcagccccagcaccagctacagaagaagcagcTCCTGCACCAGCTACAG
AAGAAGCAGCTCCTGAGCCTGCTACTGAAGAAGTAGCACCAGTACCAGCT
ACAGAAGAAGTGGCTCCTGAACCTGCTACTGAAGAAGCAGCCCCAGCACC
AGCTACAGAAGAAGCAGCTCCTGAGCCTGCTACTCaagaagtagcaccag
caccagctacagaagaagcagctccagcaccagcaacagaagaagcagcc
ccagcaccagctacagaagaagcagcTCCTGAGCCTGCTACTgaagaagc
agccccagcaccagctacagaagaagcagccccagcaccagctacagaag
aagcagcTCCTGAGCCTGCTACTGAAGAAGTAGCACCAGTACCAGCTACT
GAAGAGGCAGCTCCAACACTAGCTGCAGAAGAAGTCGCTTCAGAAAAAGT
CCCATGTGAATTAGTTGAAACGAAAATTCAAACCCATACAGCAGTAGAAG
AAGCGGTAGAAGAGTTTGTGGAATCTTGCAAAGTGGTTGCCGTAGAAAAT
GCACCAACAAGTGATGTTATTGACGAAGAATCGGTAGAGATGGACAAAGA
CCAATCAGAGGATATTGAGGAGATGAAACAGAAAAGCGACGAAATAGAGA
AAGAATATTCACATCTGAAAGGTAGACTCGAGAAGATCGAGAAAGAatat
tctgaattgaaagacaaaaaagataaaattaaaCAAGAGAAGTCCGAACT
AAAGGACCATAATGAACAATTAGAGGCTAAAATAAAAGCCTTAGAAATAA
TGATGTCAGGAACTTTAGATGCGAATAATAACCCAGACGAAACAAGTGCC
CAATATGACACATTGTCTAACACATGTGCCGAACTTGAGGGTGagataag
aaaattaaaattgaggGTGTTAGTGCGAGATACGGAGGTCGAACGATTGA
AGGGATATTTAGAGGATGTTTTTAAGAAAACGAAGAAAGGGAAGTCAGGT
CATCGACGAACGAAACGTATCTTGTATGATGAGAAGAAACAACACCCTGG
TGCCATGATGTTGAACAATAAACGAAAGTCAGCATCGATGAGTAATATTC
TTGATGGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085_pilon | genome | sc0000085_pilon:875494..878764 + |
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