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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:1151289..1154716- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11605.1.p2 ID=MSTRG.11605.1.p2|Name=MSTRG.11605.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3428bp|location=Sequence derived from alignment at sc0000084_pilon:1151289..1154716- (Clytia hemisphaerica_ch_hm2_pilon)
TGAAGATTGGAAAACCATTTTCAACGAAAAGATCTCTGACACAGAAGAAT
TGATAGCATGTGTCAAGGAGATCTTACCTTTTCAATCATCAGAGAACACA
TATGAAATCATTTCTGTTAAGGGTACAACCGATGCTTTCAAAACAACGAT
AGGCTGTTCCCTTAAAAATGATGGCGATGTCAAAAATTTCATCGAAGAAT
ATTGCAAAAAGATGGATGAAACAATAAGAGCCCGCACAGTAAAAGTTTTT
GGAAATAAAAGTAAATGGTCTCAATACCATAAAATTCATTATTTTCGTTG
CCATCATTTCGAAATGCTGATTGTCCCTTTTCAATGTCAATTCGTATTTT
CCGTGATGAATCTGAAAAATACCCCGCTCAAATCAATATCGAGTATTCAC
ATAGCCATTCGACAAAATCATTACAAAGTTTGAGCTTCAAAGATATTCCT
GACCACGTTTCAAAGACGATACATGAACTTTTTCAGAAAGGATATACCCC
TGGATTAGCATATCGTGAGATGATGCAAGACCTCAAGTCAAAGAGTACAG
ATGACCTAGATTTACACCTGAAACTGGCAGACCGCTCACAAATGCCACGG
AGGAGAGATTTCAATAATTTATATACAGATTATCATAGAAGATTGTTCGG
AACCGCCAATATCAAAGAAATGTTTAAAAATCTTGAAGGTATGGAAATAT
AATCCAAAATGTTATGAGTTATACCTATACATTTTTAACCTTTTAACCAA
TTTAGGGCATGATTGTTGTTTAATGAATGATCCTGAAAATTGTGTCTTGA
TTATAGACTCGGAGTCATTCTGACAGAAGTTTCCTAAAGGATGTACAATT
GAATCTCTTAAATTCCTATCTCTGTCTCGAGTCCAACAAGAAGCTCGATC
CTCGGGTATTCTAGACAAAATTTGTTTCTTTATCTTGAAATTTCTCCATC
TCGAACAAATTTTTCAATCTTTTAAGAGAGAGATAGCGAGATTCCACTGT
ATAAAATAATAGAGTACTTTCAAGGATTTTGAATAGATATTTGCATCTTC
TTTAGAACGCATCTCTTCTTTTCAACAAAGCAACCCTGACAACCTCGTAA
AATTACAACATTTCAATGCAGAGGAAAATGTCCCTTTGATATTATGTATC
ATCACTCCATTAATGCAACGGGTTCATGAAAAGGCACAGTTTTACTTCTT
AAAATACTTATTATTTATATTGTAATTCAATAAAAATGGCAATAATGATA
AACACATTTATAGCATTCTTTGATTGCATCAAGTGACTGTCTTTATGGAC
TTTTTCATAACTCTTTTTAGGTTCCTACAGCGGCTGAGTTGGTCTTTATT
GATTCGACATCAAATACAGAAGAGTTCAATCTCAGAGTTTTTCTCCTGGT
GACTCATACGCCAATTGGTGTCTTACCGCTTGGAATTTTGTTTACAAGTG
ATGAGACAACGGATACCTTGATCCAAGCACTTGAATTGTACTTGGCTCTG
TTACCTGATTTGGCTTTCTATAAACGTGGAAAGCGCCGGGGACCATCCGT
TTTCATGACTGACAACTGTTCCGAATTGCGTGATGCATTGAAGAACACTT
GGCCAGAATCAACCCTTTTACTATGTATATTTCATATTCTCCAACAAGTT
TGGCGCTGGTTATTTGACAAAAACAATGGAATTGCAGCTGGCGACAGACC
GGGTATAATGACACAATTCAAGAGAGTGTTGTATCAATATATCCTAAACT
CTCATCTTACTTAAATGGCTTGTATGATTATAAAACCAGTTGGGCACTTT
GCTTCCGAAGAAAATTGATGTTAAGGGGTAATAATACAAATAATGCAGTC
GAGGCTCAATTCTTAGTCCTTAAGGACAACATCCTAAATAGAACTAAAGA
AATTAATATAAATGGTTTGTTTGATAAAATGACAAATGAGCTCAATGAGC
ATTACAAAGTTAAACTTTTAAATGTAGCCTCTGGAAGTTTCGACGGTGTT
TATGCTCAACGATTCAAACGGAAAGAGAAGAAGAACAAAAGTGGTGGAAA
GGTATTTCGGTTACCTGATTTAGTCAGTCAAGCGTCGTTTGCCTCTCAAA
TCATACAAGTTGGTCCGTCAGTTTATAATTGTCCAAGTTTTACAAATGCC
GATTCTACTTATACCATTGACATGGATATTGGTGTTTGTACATGTGAAGT
GGGTTTAGATGGTTCAGTCTGTAAGCACCAATACGTTGTGTGGAGTCATA
AGCTTGGCAAAGGCCGAAATTTTTTACCCTATCTAAACGCAGAAGAGAGA
AAAGGATACGCATACATCGCTATCGGAAAATCATTACCCGATTCGTATTA
TGAAGGTATTCATTCGGATAACACCCAGCAAGCAAACAACCAAGCTGACA
GTTATACCACAAATGACGCAGTTGCAATTGAAAAGATTATTATTCAAGAC
CAATCTGAATTTCAAAGAAACAGAATCGAGCAAACATCAGCCGAAGAATG
CAGATCTAATCTGCGCAAAGCAACAAAATATTTGATAACCAAAATCGACG
TACGAGAGAATGATCAATCACTTCTCAATGGAATAATGACATTCTGTGAT
CGTGTTCAAAAGTATCCTACCTCCCGATTGACAAGCCTATTTCATTCATT
TGGAAGCACTATGACAACCAGCCGTAAAATTACCGCAAACTCTATTCTAA
AGAAAGCCAAACGTGGTAAGATTTTTGTGCAACCAGGAGCTGTTCAAAGG
CGCGCATCTCTATCAGGCTCTAGAAATGCAAGAGTTAAAGGTATACAAGT
GAAAAATAATCCCTTTGTTGGAAAGATTCCATCCAGAAAGAGACCACATG
CCTTTTCGGACAACGTTAGAAATAATGTAGCAGCACCTCACAAAGCGGGA
AAAACTATGAGTACCAAAACGAAACACCTTTCAAAATGTAAATCTAAATC
AGTTGGTAAGACCAATGAAGAATAACACTTGAGCATATTCTTTTTTATCT
AAGTTTGTTTTATTTTCATTGAAAGAATAGCATTCGTTACGAAAATATTT
ACATTAAAGTATGAACTCAAAAATGTTTTTTGTTATGCCTGACCATGTTG
CCCTTGCTACCAAACCTTTTTCCACAAGCATCGCATTCGAAAGTCTTTTC
GTGACTTTTTACATGTGTTAAAAACGTTTGCTTTATACCAAATTTTTTGT
TGCATATTTTACAAGTATAATTCTCCTCATGGGTTTTCATGTGCTTCTTC
ATAAGATCCTTTGTTTTGAATGTTTTCCCACAACCTTCGCTGTAACAAAA
TAATTCGTCCCCACATTGTTTTTCATGGAACCGCTTTCTTTTTTTTTGCT
TAAAGAATTTGCCACACAAGCCACATTCGTAACCAGGCGTTTTTTCTCTC
TCTGTCTGGGCTTTCTTGTTCCACTCCT Coding sequence (CDS) from alignment at sc0000084_pilon:1151289..1154716- >MSTRG.11605.1.p2 ID=MSTRG.11605.1.p2|Name=MSTRG.11605.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2781bp|location=Sequence derived from alignment at sc0000084_pilon:1151289..1154716- (Clytia hemisphaerica_ch_hm2_pilon)
GTTCCTACAGCGGCTGAGTTGGTCTTTATTGATTCGACATCAAATACAGA
AGAGTTCAATCTCAGAGTTTTTCTCCTGGTGACTCATACGCCAATTGGTG
TCTTACCGCTTGGAATTTTGTTTACAAGTGATGAGACAACGGATACCTTG
ATCCAAGCACTTGAATTGTACTTGGCTCTGTTACCTGATTTGGCTTTCTA
TAAACGTGGAAAGCGCCGGGGACCATCCGTTTTCATGACTGACAACTGTT
CCGAATTGCGTGATGCATTGAAGAACACTTGGCCAGAATCAACCCTTTTA
CTATGTATATTTCATATTCTCCAACAAGTTTGGCGCTGGTTATTTGACAA
AAACAATGGAATTGCAGCTGGCGACAGACCGGGTATAATGACACAATTCA
AGAGAGTGTTGTATCAATATATCCTAAACTCTCATCTTACTTAAAACGCA
TCTCTTCTTTTCAACAAAGCAACCCTGACAACCTCGTAAAATTACAACAT
TTCAATGCAGAGGAAAATGTCCCTTTGATATTATGTATCATCACTCCATT
AATGCAACGGGTTCATGAAAAGATGTCAATTCGTATTTTCCGTGATGAAT
CTGAAAAATACCCCGCTCAAATCAATATCGAGTATTCACATAGCCATTCG
ACAAAATCATTACAAAGTTTGAGCTTCAAAGATATTCCTGACCACGTTTC
AAAGACGATACATGAACTTTTTCAGAAAGGATATACCCCTGGATTAGCAT
ATCGTGAGATGATGCAAGACCTCAAGTCAAAGAGTACAGATGACCTAGAT
TTACACCTGAAACTGGCAGACCGCTCACAAATGCCACGGAGGAGAGATTT
CAATAATTTATATACAGATTATCATAGAAGATTGTTCGGAACCGCCAATA
TCAAAGAAATGTTTAAAAATCTTGAAGGTTCCTACAGCGGCTGAGTTGGT
CTTTATTGATTCGACATCAAATACAGAAGAGTTCAATCTCAGAGTTTTTC
TCCTGGTGACTCATACGCCAATTGGTGTCTTACCGCTTGGAATTTTGTTT
ACAAGTGATGAGACAACGGATACCTTGATCCAAGCACTTGAATTGTACTT
GGCTCTGTTACCTGATTTGGCTTTCTATAAACGTGGAAAGCGCCGGGGAC
CATCCGTTTTCATGACTGACAACTGTTCCGAATTGCGTGATGCATTGAAG
AACACTTGGCCAGAATCAACCCTTTTACTATGTATATTTCATATTCTCCA
ACAAGTTTGGCGCTGGTTATTTGACAAAAACAATGGAATTGCAGCTGGCG
ACAGACCGGGTATAATGACACAATTCAAGAGAGTGTTGTATCAATATATC
CTAAACTCTCATCTTACTTAAAACGCATCTCTTCTTTTCAACAAAGCAAC
CCTGACAACCTCGTAAAATTACAACATTTCAATGCAGAGGAAAATGTCCC
TTTGATATTATGTATCATCACTCCATTAATGCAACGGGTTCATGAAAAGA
TGTCAATTCGTATTTTCCGTGATGAATCTGAAAAATACCCCGCTCAAATC
AATATCGAGTATTCACATAGCCATTCGACAAAATCATTACAAAGTTTGAG
CTTCAAAGATATTCCTGACCACGTTTCAAAGACGATACATGAACTTTTTC
AGAAAGGATATACCCCTGGATTAGCATATCGTGAGATGATGCAAGACCTC
AAGTCAAAGAGTACAGATGACCTAGATTTACACCTGAAACTGGCAGACCG
CTCACAAATGCCACGGAGGAGAGATTTCAATAATTTATATACAGATTATC
ATAGAAGATTGTTCGGAACCGCCAATATCAAAGAAATGTTTAAAAATCTT
GAAGGTTCCTACAGCGGCTGAGTTGGTCTTTATTGATTCGACATCAAATA
CAGAAGAGTTCAATCTCAGAGTTTTTCTCCTGGTGACTCATACGCCAATT
GGTGTCTTACCGCTTGGAATTTTGTTTACAAGTGATGAGACAACGGATAC
CTTGATCCAAGCACTTGAATTGTACTTGGCTCTGTTACCTGATTTGGCTT
TCTATAAACGTGGAAAGCGCCGGGGACCATCCGTTTTCATGACTGACAAC
TGTTCCGAATTGCGTGATGCATTGAAGAACACTTGGCCAGAATCAACCCT
TTTACTATGTATATTTCATATTCTCCAACAAGTTTGGCGCTGGTTATTTG
ACAAAAACAATGGAATTGCAGCTGGCGACAGACCGGGTATAATGACACAA
TTCAAGAGAGTGTTGTATCAATATATCCTAAACTCTCATCTTACTTAAAA
CGCATCTCTTCTTTTCAACAAAGCAACCCTGACAACCTCGTAAAATTACA
ACATTTCAATGCAGAGGAAAATGTCCCTTTGATATTATGTATCATCACTC
CATTAATGCAACGGGTTCATGAAAAGATGTCAATTCGTATTTTCCGTGAT
GAATCTGAAAAATACCCCGCTCAAATCAATATCGAGTATTCACATAGCCA
TTCGACAAAATCATTACAAAGTTTGAGCTTCAAAGATATTCCTGACCACG
TTTCAAAGACGATACATGAACTTTTTCAGAAAGGATATACCCCTGGATTA
GCATATCGTGAGATGATGCAAGACCTCAAGTCAAAGAGTACAGATGACCT
AGATTTACACCTGAAACTGGCAGACCGCTCACAAATGCCACGGAGGAGAG
ATTTCAATAATTTATATACAGATTATCATAGAAGATTGTTCGGAACCGCC
AATATCAAAGAAATGTTTAAAAATCTTGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:1151289..1154716 - |
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