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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:1081505..1090741- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11501.1.p3 ID=MSTRG.11501.1.p3|Name=MSTRG.11501.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9237bp|location=Sequence derived from alignment at sc0000083_pilon:1081505..1090741- (Clytia hemisphaerica_ch_hm2_pilon)
GGGAAGAGAGAATGCTCATTTTGTGCTTCATAGGTTTTGTTAATGATTTT
AGTCCAGCAGCTTTATTAGCAAGAAAGTTAATAATTTTACAGAGGAAAGC
TGGGTGTTCCTAAAAGGTAGGCTACCCCAGCAATTGGGGTAAAATAAATT
TAAACAAAATTTTGTAAACTGATGCTTGAGTTCATGACATCATAAATAAA
ATGACACTAAAGTCTTTGATCAATCATTTACAAAAATCAGATTTAAAATT
ACTGAGAAATGAGAGTAGGTGTAGCGCTCCACCTATCTCCTGATGGGTCT
AGCACAGATAGAAAAGGGGATAGACTCCCTCACTACCCGCTCTGTCAACA
ACCCCCAGATGAATATACTTACTACTTTTACTCATTAAACTTTGACTAAA
ACTTGTAAAACTAGTTTGGTCATTGACTTGTAATCCACTATTTTGCTATT
TTTATATTTAGGACTATGAATGCTATAAATGGAATTAAAAATGGAATGTC
ACCTAAAAGTTTCTATAGTGGTTCCACAAAAAAAGAGTATTTGTATTTAT
TGTCGAAGAAAAGAAAGCGCTTAGAGCGTGAAAACGAGTATATAAAGCGC
CCATTGCCCAAGATCCAAATTTATGAAAACTGTTTCACAGAGAGAAGAGT
GTGGAAAAAATTTCACAGACAACAAGATGCATTGGAATATTGTCAAAGAG
TGAAAGAAAAGTCAGTCTGTTTGTTTTCACTTGAAAAACAAGATGGGAAG
AGATCATTTTTGGTGACAACAAGAAAACAATTCTGGAATAGATATAACAC
AATGGATCCCACAAAGAAACATTTTTATGAAGTGATCATGGAGAATAATC
CTTGTCGACTCTATTTTGATATTGAATACAAATATGAATTTAATCCAGGA
CTAGACGGATGTGCAGTTACTGATCTTTTCATTAGATATGTTTGTCATTG
TCTCAACAAAGAGTTTAATATCCATTGTACTCCAAAAAATGTTATTGATA
TGTCTTCGAGCACTAATACGAAATTCTCCAGACACTTGATATTCATCCAT
CCAAAACTTTTGTTTCAAAACAATATCCAGTGTGGTGATTTCGTAAAAGA
AATTTGTTTTTCACTTCGCAGTTTCTTCTTAACTGGTAGCCATAATAAAT
TTCTACCTATCAATGATGATGGTGATAGCAAAGAAAATATTATAAACGCA
CCGACGAAAGACTTGCAAGATATTATGATAATGAATGAAAAGAATGAGCA
AATGTTTATATGCGATCTATGTGTTTACTCTAAGAATCGAAACTTTAGAT
TATACCTATCCAGTAAAGTATCCAAGCATGTTCCACTTGTATTATCAGAT
GAATCCAACAGATATACTTTCAAGACCAGACCAAAAAGACGAGATATGTA
TATCAAATATCAAATGAAGAATCTACGGTTTGATGAGGATTTTGAAAAAT
TTGCTGATACTTTGGTCTGTCCCGCTGATTATAAAGAAAATGACATTCTT
TGTTATGGAAATGAAAATGCTTGCAAAATTGTAAAACAATTTGGTGGGTA
CAAATATTTTAGACAATTTTTTTTTTTTTTTTTACATTTTTAAAGACAGA
ATAATTTTTAATTCTGAAATCGTATCTTCAATGCTGGTTTTAAAACTGGT
TTAAAGAAAAAATAAGCTAGTAAATGCCAACCCCAATACTCCTATAGTTG
TAAGAAATCCAGAGTCAGTTGTCAGAATCAACTTTTTGAAGCACAGTTAT
GTTATCATTACCATCAGTTATCTGGCTAGTATTGTTCTTGTTTTTATTTG
TTAAATTTGAATTTCCTCTTTCCAGACCGAAGTACATCTCAACCAAATAA
TCATTATAAGACAGGCGTCAGTAGCCTTTTTCCTGATCTCGATAAGTTTG
TTGTGGATACTGTCAATAGGAATGGACCTAAAGGTATGCTGAAAGTGTGT
TTTTATGTCTTGTCATTTTCAAAGTATCTTTTATATAATAGGTTAATAAT
ATCTTACAAGACACCATTGTTCTTATGATGACTTATGAAGTTAAAATTTC
AAATAAAATTGGGTTAAGAAGATTTGAATTTGTTTTTAGAAGAGTAAAAT
AGGATGTTTTGAACAAATAATTCCAAGCTTTAATGTTACAATCACCTTCC
TTGAAAATACAAATCAAATTTCTTAACATTTTCCTTAGGAAAATCAGAAA
AGAGAATTTCCTTAAAAGACAATTTTTATTAAAATTAGTCTCCTAGAGTA
TTCTTGGTCTACTCTTTTAATGATCTGCCATTTCATCAAAACCCCTCCAA
ACTAACATAAAACACGCATTATTACCATTAGGTCATATTCGTAGATGGAT
TCACTATGAGGATCGTCAAATGATCATTTATGATATTGGTGACAATCGGT
GGTGTGGGAACATCAAACGAGAACACAAAAGCAACCACATTTACTATGTC
GCTGACTTAACATTCTCACAACTTTATCAAAAATGTCACGATTTCGAATG
CTGTGCTTATCGCTCTGAAGAAATCCCTATACCCAAAGACATCAATCCTA
TAAATTCAGAAACGACTGGCAATATTCTTGATGATGATTTAATGGCAATT
TTTGATTCAGATATAGATTTTGTTGGAAAGAAGGAAGATTTTTTCAATGA
AGGAGACACAGTATTGGATGAAGAGATTCTGAAACTCTCAACAACTAGTA
TGTTCGAAAATACAGATTCAACTGCTTCAAACAGAATTGGTGATGCGTCA
CCTAATGCTGGGAACTCGTCCACGAATCCATTTTTCAGTACTTTCAACAG
CAATTCAGAAAGACCAAATAATGCTTCATGTGAGAGTTCAACCTTTACAA
CCCTGGTAAACGACACCATTGATGAAGATATTAATATTGGAAGTTCTGAT
GATGAAATTTTCTTAGATAAATCACTATCCTTTACCGAAGATAATGTGAA
TCAAGAATCAGTATCCTGGACGGCAAACAATGTATTGTCGTTGAACTCAC
CAGAAGATCTGTTTGGCAATTCACAAACTTGGTCAGACAGTCTTGTTTCT
CAACCAGAGTTTACCGAAGACGCCGATTTTTCTCTCCGACCACCTCAATT
CAATTCGATTAAAAGTGATTTGAATTATGATTCTGAACTGTCAGCTACAA
GTAGTGCATTTAAACCAAATGAACACTTGAACGTGTTGGATTCAAAAAAC
GTTGTGTTTTCTTCTTCTCAAGAAAATACCTTGAACAAATTTTTTGAAGA
GGATTTCTCGTTTGATTAATCTCTTTTGATCTTTTCTCAGGTTTTAATCA
GGCCCTGGAAAAGGAAGGTTTTCCAAATTTTCCAGGTAAAAGGGAGTCTT
TCTTTCTAATTGTTGAGAGGAAAATTTAGGAAATTTCCAGATCTCTTAAA
ACGGTTGTTGGTTTGTAACTCTAGAGTGTCGAAAATGCTCGAAAATGGTT
TCTCGAATTTTAACAATACCACATAAGTTAACTCACTTTGGCTCGCCTCA
AGAGAAAATTTCAATGAAAATATGAATTCTTGCATGAAATCTTTTATGAA
ATGTTATTTTTATGTTTATATTTTGTAATTCTAATTATTTTATTTTTTTA
TATTTTGTAAGCTTTGGAAAGATTATGCTCGGATCTCATCTTGTATTCAT
TTCAGGCTCTGACTTCTCCAATTATATTCTTTCGTTGATATTCAAGGTTC
ATTTTTTTTTTTTTTATTTAGGTAAAAATAAAACAATAAAATCTAAGTAA
CTGGGAAAAAAAGGATTCATTTGGTACCTGATGTCGAATCAAGGGGCTGC
TTTGCAGCTGTACAACAACGAACTCGTAAAATGTAAGAAATATTTCTGTT
TTTTTATGTACCATTTTATAGGTGTGACTGGCAATCCTCACATCTGGGGG
TTCGTTTTATAGTTTAGACGGTCGACTTTCTGTCCTGCCAATTCTTATTG
TTAGATAGGTAAACAATCGGCAGAAGCTTGGCAATTAGAATCTTACATTG
AAAAAGATTTGAAAAAGTCATTGCATTGACCTGAAAAGAGGCCTGCATCG
GCTATTGACAGCCAACTTTCCGCCCACTTTAATTCACAATTAGAAAGACA
GGGTGATAAGTAGACCGTCTAAACCATAGATTTATAAAGCCCAAAGGGCT
AGATTGCGTACTTTTGCTGAATAGTGTACCGTGGTTAGGTAGGAAATCCT
ACCTAAGTCACGTGACATTACAATAGAATTTCAGCGCTTGACCAATCAGG
AGCTTCGCGGTAGCAACAATATCTTTTTCCGATATTCACTTTTTTTTGCC
TGTGATGGCTTAAAGCACGACATCTAGCCCTTCGGGCTTTACAAATCTAT
GATCTAAACCATAGCTTTATTACTATTATTCTGTTGTTTTTATATTGAGA
AATAAAGAACTAACTTTCAATGTACTACCTTAAAGGAAGAAATTTTGGCG
GGAATTTAATTTGGCGGATGGGCGAAAAAACTAAATTTGGCGGGAATTTA
ATTTGGCGGTCGCTTAAAAATTTAACCTTAAGATGGCGTCAAAACAGCGA
AAAAATAGCAAAAACACCTTAAATTTTCAAAATAAAAAAATTTTAAGAAA
TAATAATTTTGAAAGAAGATTGCCGGCACAACTCATCTTCATTTCTGATT
TTTTGCTCGGATTTTTCAAATTAGCTTAAGAACTGAATAATTAAGAACTT
TGTGATTCTACTTATTTCAATGTCAATCCAACCAAACATTATCGTATGTT
TAGGTATCGAAGATCTTTGTACAAAGCGTGACGAACTACACAGACAGATC
GTCTCAGAAGAAGAAGAAAAAACCAAAATTCAAAACGATATTCGCATTCT
AACTGAAAGATTGGCAAAAGTTACGGAGAGTTTATCAAAGAAATACGCAG
CCCAAAACGATTATGATCGAACTATTTCTGAAACTGAGGCTGCGTACATG
AAGGTATCATCAAACACTTAAGTGATTAAGTGATCCATATCTTACTCCAG
TTGATTAAGTATCCTTCTTAAAACAAAGCGAGGCCTTTTAAAAAGTTATA
ACTTAGGCCATGCTGTTTCAAGAATTTCTTTGACGACTTCCTATAATTAT
AAACGTCTTCTTGTTCCGATTATGCATGTGAGAAATTTTATACCGGGTGC
GCCAGAAAAAAGTATATATACAGTTTTGTCAAGATAACGTAATGTTTTTT
TGTCGATTTTATTTTATTTTATAGTAGGGTAGGGCGTCAACAGTCATTTT
TGGGGCAAAGTCAAAAAATTCAAGATGTAGTGTTTTTTTATGAAAATTTT
ACCTATTGTGAGGCATTCTGCGCAATTTTTAAGGTCAGAAGTCCAAAATT
GGCCGAACCCCCTGGGGGTACTGATTCGCACTACAGGCAAAAATTGGAGA
AAAATGGCATTTTCTGGCCTTTTCAGGCCTGTAAATATGTCAAAACTATT
GCAAATCTTATTTTTTTTCATTTGCTGTACTAAACTTTATGAAGAAACAA
CAAAATAATCATATTGGGTTGAAAATTGTGCCCATTGGAGCCCTAAACGA
GCCGTTTTAAGCCAATTTTGGGTAGCAAAATGCTTTTTAAGGCCAATTTT
GCAAGTTCATAAACTTTAAACTGATTAAATCACATGTCTGAAATTTTCAG
AGATGGAAGTCTTCAATAAAGTCTTTAAGCAAAATGAATTTTAAGTTATT
CACTTTTTTCAAAAATTCATAATGGCGTCTTCAAAAATCGCTTTTTAGCA
AAAAAAATCATATTTATCAAAAAATAGCATTTTTTAAGGCAAGCTTCTAC
AAACTGAGTTTAAATGCTGACTGAAATTTTTTATGCAGTGATAGTATTCT
GGAGATACTCCAGGGAAATCAAAATCATTTGGGTCTGGGATGCGTCTATG
TCCGCCATTATGGAAAGAAAATCCCTGTTAAGAGCCATTTTTCAGGCAAA
AACCCAAATTTGAACTGAAAAAATATCTAAAATGACAATAGACATGGGCC
CGAATTTTCTTGCAGTGATAGTATTCTGGAAATACTGCAGAAAAATCAAA
ATCATTTGGGTTTGGGATTTGGGTATATCCACCATTTTGGAATTGAAATT
CCTGCTAAAACGCAATATTTCAAGCCAAAATCCCATTTTTGACTGGAAAA
ATCTTAAAAATGGTAATAAACATGAACCTAAAATCTTTTTGCAGTGATAG
CCTTCTGGAAATACTCCGGGGAAATCAAAATCCTTTGGGTTTAAGATAAG
GGTATGTACGCCATTATGGAATTGAAATATGTGCTAAAACTGGCTAAAAT
GCAACATTTCAAGCAAAAACCCTATTTTTGACTAAAAACTGCTCTGAAAT
GGCAATAGACATGGACCCAAATTTCTTTGAAGTGATAGTATTCTGTGAAT
TCTCCTGGGAAAACAAAATCATTTGAGTCTGGGATTTGTTTACATCCACC
ATTATGGAAATGAAATCTCTGTTAAAATGCTACATATTTCCATCCAATAT
GTCATAATTGACTAAATATTTTGTATGTTACATTATAACAAAGAATATGA
ATTTACAATCCTTTAATTTAAAAATACTAGTTGAAACAAATTATAGCAAA
AATTCTATTCCACTCAACAATACATACATTTCCATTCTCAAGACTTGTTC
CGTCAAAAAAAGATTGGATTTTGGCATGAAATATTATTTATATACATTTT
AAAACTGGCCTCAGTTCAAAAATTGTTGTCCCAGAGACATCTTATACCTA
AATAGTTTTTACCCCTGGAGTATTTACAGAACAATATCACTGCAAAAAGA
TCATGGGCCCAAAACTATTGCCATTCTAGAAAGGTTTTTAGTCAAAAATT
GGGTTTTTGCTTGAGATGTTGCATTTTAGCCAGTTTTAGCATGAATTTCA
TTTCCATAATGGTGGATGTAAACAAATCCCAGACTCAAATGCATTTGTTT
TCCCAGGAGAATTCACAGAATACTATCACTTCAAAGAAATTTGGGTCCAA
GTCTATTGCCATTTCAGAGCAGTTTTTAGTCAAAAATGGAGTTTTTGCTT
GAAATGTTGCATTTTAGCCAGTTTTAGCACATATTTCAATTCCATAATGG
CGGACATACCCTTATCCTACACCCAAAGAATTTTGAGTTCCCTGGAGTAT
TTCCAGAAGGCTATCACTGCAAAAAGATTTTAGGTTCATGTTTATTGCCA
TTTTTAAGATTTTTCCAGTCAAAAATGGGATGTTGGCTTCAAATATTGCG
TTTTAGCAGGAATTTCAATTCCAAAATGGTGGATATACCCAAATCCCAAA
CCCAAATGATTTTGATTTTCCTGCAATATTTCCAGAATACTATCACTGCA
AGAAAATTCGGGCCCATGTCTATTGTCATTTTAGAAATTTTTTTTAGTTC
AAATTTGGGTTTTTGCCTGAAAAATGGCTCTTAGCAGGGATTTTCTTTCC
ATAATGGCGGACATAGACGCATCCCAGACCCAAAAGATTTTGATTTCCCT
GGAGTATCTCCAGAATACTATCATTGCATAAAAAATTTCAGTCAGCATTT
AAACTCAGTTTGTAGAAGCTTGCCTTAAAAAATGCTATTTTTTGATAAAT
ATGATTTTTTTTGCTAAAAAGCGATTTTTGAAGACGCCATTATGAATTTT
TGAAAAAAATGAAAAAATTAAAATTCATTTTGTTTAAAAACTTTATTTAG
GACTTCCATCTCTGAAAATTTCAGACATGTGAATTAATCAGTTTAAAAAG
CATTTTGCTACCCAAAATTGGCTTAAAACGGCTCGTTTAGGGCTCTAATG
GGCACAATTTTCAACCCAATATGATTATTTTGTTGTTTCTTCATAAAGTT
TAGTACAGCAAATGAAAAAAATAGGATTTGCAATAGTTTTGACATATTTA
CAGGCCTGAAAAGGCCAGAAAATGCCATTTTTTCCAATTTTTGCCTGTAG
TGCGAATCAGTACCCCATCAGTACCCCATCGGCCAATTTTGGACTTCTGA
CCTTAAAAATTGCGCAGAATGCCTCACAATAGGTTAAATTTTCTTAAAAA
AACACTACATCTTGAATTTTCTGACTTTGACATTTGACGCCCCACCCTTT
CTATAGGGAAATACTTAACTTAAATTTCGTATAAAAACTTTAAAATCGGT
TCTGTCAATCAAAAGCTGTGTCAAAAAAACTAAAGGTAGAGGTCAAGTAA
AAAAAAAAGACTTTCCACAGTTTCCTACATTCCACTGCTCCCAAAATTTG
AACAAATTTTTTCAAAATTTCTGAAATTTCACTAAAAACTTGGCTCGAGG
TGAATCATAAGCATGATTTATAAGCATATAATAAGCATAAGCTATGTCTG
GATGCTTTGAGAACTTAAGCATACACAAGCCTGACCAAGGGGCATACAAT
TGCTTATAATAAAAAAAACATGTGAAATAAATAAGATAGTGGTCTTCCCA
TTATCAAGGACCGTATTGTTCAAAAGCATTGACCCATCCTGGAGCTGAAC
TTTTATTGCATTCCTAGAATCAGAATATGAAATCAACTGTCTTGTATTAT
CATTTCTTTTTAGATATTGGAAAGTTCTCAAACACTCCTACACGCGTTAA
AGAAAGAAGTGGTCAAGGATGCACCGCCACCTAAAAACAATCATGGTCAT
GTGAACAAACATGGGGTATAGTAGGGGGAAAGGTAAAAGGGTTAAGACCT
TTATTGGTTGTATAAAAGGGTTTGAGTTTTAACAATAAGTTTTTTATAGG
CGTAGCGAGATACCCTGCAAAATTTATGGATGAGAGCGTCTTTGTTTTAT
CAAAAGATAATGAATATGTCATAAACGTCTGCACTCCCTCATAAATTTTG
CAGGGTATCTCGCTACGCCTATGATTTTATTGTCTGGTTCTGTACCACTT
TGCAATCATGTTTATCATGTTGAGACTGCTACTCGCTGTAAATGTAAACT
GGAAATCGTTCATGAAGATAAAACAAATTGAATTCCCTCTTCTTATTGCT
TTTTGGGGATATCGAGTGGGTCTATTGAGATTATCGACATATCGAATGTT
ATCTGTTAGAAAACCCCTCTAAGAAGACGCTTGTGACGTTTTTTGTATAT
ATTATATTTTTGCGTGCCATATATTGTAAATTAATGGATTTTTAATAATG
ATATGATAATGATATGATAATGGATATGACTTAACAATAAATGATTATTT
TCTCTCCTTCTTTCTATTACGGCTACATGCTTATTCC Coding sequence (CDS) from alignment at sc0000083_pilon:1081505..1090741- >MSTRG.11501.1.p3 ID=MSTRG.11501.1.p3|Name=MSTRG.11501.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1080bp|location=Sequence derived from alignment at sc0000083_pilon:1081505..1090741- (Clytia hemisphaerica_ch_hm2_pilon)
ATATTGGAAAGTTCTCAAACACTCCTACACGCGTTAAAGAAAGAAGTGGT
CAAGGATGCACCGCCACCTAAAAACAATCATGGTCATGTGAACAAACATG
GGGTATAGGTATCGAAGATCTTTGTACAAAGCGTGACGAACTACACAGAC
AGATCGTCTCAGAAGAAGAAGAAAAAACCAAAATTCAAAACGATATTCGC
ATTCTAACTGAAAGATTGGCAAAAGTTACGGAGAGTTTATCAAAGAAATA
CGCAGCCCAAAACGATTATGATCGAACTATTTCTGAAACTGAGGCTGCGT
ACATGAAGATGTCGAATCAAGGGGCTGCTTTGCAGCTGTACAACAACGAA
CTCGTAAAATATATTGGAAAGTTCTCAAACACTCCTACACGCGTTAAAGA
AAGAAGTGGTCAAGGATGCACCGCCACCTAAAAACAATCATGGTCATGTG
AACAAACATGGGGTATAGGTATCGAAGATCTTTGTACAAAGCGTGACGAA
CTACACAGACAGATCGTCTCAGAAGAAGAAGAAAAAACCAAAATTCAAAA
CGATATTCGCATTCTAACTGAAAGATTGGCAAAAGTTACGGAGAGTTTAT
CAAAGAAATACGCAGCCCAAAACGATTATGATCGAACTATTTCTGAAACT
GAGGCTGCGTACATGAAGATGTCGAATCAAGGGGCTGCTTTGCAGCTGTA
CAACAACGAACTCGTAAAATATATTGGAAAGTTCTCAAACACTCCTACAC
GCGTTAAAGAAAGAAGTGGTCAAGGATGCACCGCCACCTAAAAACAATCA
TGGTCATGTGAACAAACATGGGGTATAGGTATCGAAGATCTTTGTACAAA
GCGTGACGAACTACACAGACAGATCGTCTCAGAAGAAGAAGAAAAAACCA
AAATTCAAAACGATATTCGCATTCTAACTGAAAGATTGGCAAAAGTTACG
GAGAGTTTATCAAAGAAATACGCAGCCCAAAACGATTATGATCGAACTAT
TTCTGAAACTGAGGCTGCGTACATGAAGATGTCGAATCAAGGGGCTGCTT
TGCAGCTGTACAACAACGAACTCGTAAAAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:1081505..1090741 - |
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