MSTRG.11493.1.p1 (mRNA) -

Overview
NameMSTRG.11493.1.p1
Unique NameMSTRG.11493.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000083_pilon:1006438..1007587+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11493.1.p1 ID=MSTRG.11493.1.p1|Name=MSTRG.11493.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1150bp|location=Sequence derived from alignment at sc0000083_pilon:1006438..1007587+ (Clytia hemisphaerica_ch_hm2_pilon)
ctaccatatGTGCGGCCATTTAAaggtatattttccaagcttcccaaagt
gcactcaaaggatgtaaaatttagaaaatctgaccatgttttgcctgaaa
atggtcaaaaattttaaagaaagctCACGTTTGCAAAATTTaccctgcac
tgtaagggtccgatttcaaaggcctaattttgggctgcacgtatggtcgt
ttttgaatcgagtgcccccccccccagatcAAGCCTCTTTGGATGCCCGA
TATCTCCGCCTTACAGtcttttcttgaaaagtttATTGCTTTATGACTTT
GTTCCAAAGAAAACAACTCCCTTTCAATAAATCTTGCTTAGCTCTTTCAA
ATAAATTATGTATTctcatttgtttttcttcttttttcagaaaagtaaaa
aataaacaaaatagtagaataaaaaGGTGCAATGAACACATTTGGAAACT
TGCTGCGTGTTTTACCACGTGTTCCTTTGTTGCCTACCCAACGACTTCTC
ATCGTACCATCATCCAATCGTATTTGTGGAGCTTTAAACTCAACATGGGT
ACCAGACAATCTACCTAAATACCGTGATGGTTTTAACGAAATTCCGGAAC
TAGAAACAGCCGATCCTGTTGTCCAGAAATTATTCAGTCTCGAAATGGCG
GATGGGATTGAGACACGTAAAGTATTACGAACAATTAACACTGATAAATA
TGAAACAAAGCTGGAGAAAAACATAGCGAATAACACTCTACATATTCGAA
TGTTGGTTGAACAGTTAAAACAAAACCATaaagataaacaaaacaaagtc
TTCTTGATTTGGGCAATTGATCAACGTAAAAAGCGATTGAGACGCTTACA
GAAACTAGATATCAACAAATATAATTCTTTGATTGAAGAGTATGATATTC
CTCCTCTTGAAAGTCCTCAAGATCCACAGAATAAGTACAAATTCCGTAAA
TTCAAGATCAATGTACCgctggaaaagaaaagaaacattgaAGATTTCGA
AAAAGATCGAAATTATTAacagatatttttgtttggttttaaaaTATAGA
GGatgtagattttttatttttttgaaaaatgaaaatcattttctttaaag
aaaggtATTGATGTCATGACACCGAAATCCTCTTACACAGCCCTCTTCAC

Coding sequence (CDS) from alignment at sc0000083_pilon:1006438..1007587+

>MSTRG.11493.1.p1 ID=MSTRG.11493.1.p1|Name=MSTRG.11493.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=588bp|location=Sequence derived from alignment at sc0000083_pilon:1006438..1007587+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACACATTTGGAAACTTGCTGCGTGTTTTACCACGTGTTCCTTTGTT
GCCTACCCAACGACTTCTCATCGTACCATCATCCAATCGTATTTGTGGAG
CTTTAAACTCAACATGGGTACCAGACAATCTACCTAAATACCGTGATGGT
TTTAACGAAATTCCGGAACTAGAAACAGCCGATCCTGTTGTCCAGAAATT
ATTCAGTCTCGAAATGGCGGATGGGATTGAGACACGTAAAGTATTACGAA
CAATTAACACTGATAAATATGAAACAAAGCTGGAGAAAAACATAGCGAAT
AACACTCTACATATTCGAATGTTGGTTGAACAGTTAAAACAAAACCATaa
agataaacaaaacaaagtcTTCTTGATTTGGGCAATTGATCAACGTAAAA
AGCGATTGAGACGCTTACAGAAACTAGATATCAACAAATATAATTCTTTG
ATTGAAGAGTATGATATTCCTCCTCTTGAAAGTCCTCAAGATCCACAGAA
TAAGTACAAATTCCGTAAATTCAAGATCAATGTACCgctggaaaagaaaa
gaaacattgaAGATTTCGAAAAAGATCGAAATTATTAa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11493MSTRG.11493Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11493.1.p1.exon1MSTRG.11493.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11493.1.p1MSTRG.11493.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000083_pilongenomesc0000083_pilon:1006438..1007587 +