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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:3005255..3008306- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1149.1.p1 ID=MSTRG.1149.1.p1|Name=MSTRG.1149.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3052bp|location=Sequence derived from alignment at sc0000005_pilon:3005255..3008306- (Clytia hemisphaerica_ch_hm2_pilon)
AGATTTTTCCAAATGGAGAATAAATAAAAACGAAAACTAAAAGAATTATA
TTACACTATAAAGACATCAATCAAACTTACATGAGCATGAGTTTTGGCAA
AGTTTGTATCGAAACACAACCAGACCAACAAGAGAAACAAACTTCCGAAC
AAGGTTCGTCTGAATCAGAATCGTCATACAAAACACCACAACAACTTTTC
TCCTCCTTTCAAATCCCGGACATTGACTCACCGGCTGTTTCCGATACATC
AACGGAATCACCTGATTCGCCTTGCTCACCGGTTACTCAAAAATCACTGG
AAAAATCACCGAAACTACAAAACATCAAACCCAACATTATTAAACATCCA
CCGACACAATTGAAATTAACTTCATCCTTCCCAACGATGCATGCACCAAA
AATTTTCCCAACTTCAGTTCAAGCAACACAAACGACAGGAAAACCACTTC
TCGTGCAAGGCCACGCCAACGCCCACGCCCATCAGCAATTTTATTTCATG
AACCAAGGAGCTAACGGCTTTATCGGATACCAAACGCCCATCCCGCCCAC
CACCGCCTATCAACCAGGGATGTATGGCCTCTCGTCACCTTTCGTTGATC
CTCGATTTATTTTTTCGCCCCAGCCGCCAACCTCCGCCATCATTAAAAAA
GACACTGCGGCAAATCCACCTTTATCTAAGGAGATCAAAATGTTAGATTC
CTCTCCTGCTTCCAGCTCTCTCAGACAAACATGTGCCAATATACAAGGAC
AAATGGCGGCTAACCAAATCCCGTTGTGTTTAGTACAAGATTCTCAAGGT
CAACTACATCAACTTGTCTACACAGTCCCTGAGAATCTATATGAAAAATA
CGTCACTGCAGCCAAGAAAGGCTTTAAAGTCCGCGTCCAACCACACTTAG
ACAGTCTGAAAGTCGCTCTATCAAATAACGCAACCTCCAAACCAAAAATT
GAAGAAGAAAACGAGAAAAGAATATTTAATGATGAGGACTTAAAACTAGT
GAAAGATATTAAATTAAACGAACAAACTTCACCGATGAAAACTGAAACGC
AGGATATTGAAAAAATAATTAGCAAATCGAAAGTGAAAGCACCCGAGAAA
GGAACTAAGATATTAACCATGTCAGTATTGGAGCAGCTTAAAGAAAATTC
GTGCAATAAAAACGAAAAAGAACGATTAACAGTAACAAAGAATCCGACGA
CGACGGCAACGAGAAATGTGACGCCTTCTGACGTCAACAAATCGCACACT
ACAGTGAAAGGGACTTCACAGTTTTCATCAACTCAAGATGACAAGGATCT
GTCAATTCATTCACAGGAGCAAATTGTCACCGAGAAGGGAGATATGAAGA
TAAATGACAAGACACCCATCAAAATTGATCTGACATCATCACCTTGCACA
GCGAGCGGTCATTTTGAGACGGAACAATCAATAGAAATAATTGATGAACC
TTCCCCCACGCAACATAATAAAACTGTGTTGAAAAGAAAAATTCAAAGCC
CACCTTTGATGAACACCTCGGATGAAAAAATATCTTCTCTAAAAACATTG
AGTGATCATCAGATCAAGTCACCTACTCCTCTACCGAAAAATGATTTCGT
TTTAGACGATCTGACTCAACCGAACGAATGTAACGAACTTTATCATAACA
TAAATACGATCGATGGTATCCTAGCTAAGAACTCGAACGCTCTTATCCCA
AAGTCTGACGTCGAGGCTTTGTTAAGATGTTTGAAGCGTAAACTTGAGGA
AAATGATATAGCTGAGCATTTAAGTAAGCGACACAAACTTCAGGAAAATA
ACGCACAATCTACACCAAACAAGTTATCTGACAACCGAAAGGCTTTCCAT
ACAAAATGCAATAGTTATGATTATGATAGCCTAGATATGCTCTCTCCCGA
GTCTCTTCCAGAAGATGAAAATTCTGTCTTCTATTCTAACACAGATATTC
CAAGTGTATCTAGCTTGGGTTCCAGTAGCGAGAAAATCGTACCAAGTGTA
ACTTCCAGTCTAGATGCATTTGATACTAGTCTAACCGATTCTTCGCCGAA
TCTTCAAAATATGGGCGTTGATCAACATCTGGATTTGTTTGATAATTTCA
AAGACGATATTTTTAGTACAGATAGTTTTGTTTATGGTGATATTTTACCG
AACACAACCACAAACGATAAAATAATAACGAAAAACACAAATTTCAATAA
TAACACAAACATTCAAGATAAATTAATCAACAGTACAGATAATTTCAGCT
TTCCATCTGGTCAGCAGAATTACGATATGGATTTATTTGATCATTTATGG
AGTGAATTAGATAATTTATAAACTTAAAATTTGATGATGACAAATTTTTT
ATTTATATAGGGCTTTTCAGAGAAAATTTTCTTGGGGGTATGGTGGATAT
CGCGTACATCCAGTATGTTTATGTACATCAAAAGCCTGTATATAGAAATA
CCTCCTTCCTAGAGGGGGAGGGAGTGCCACCGTGTCTGTGATAAAGGACT
GTTTAGAAGTGGTCAAAAGATAAGGTCATTTTTGTGGATATCAAAGGGGT
CAAAAAGTGTGAAAGTCCAGGAGATCATAATGTTTGAACATCTAAACACT
TTAACCCTTTCCAGACGCACAGGGCACGAGGTAGCCCCTACTAGTGACCA
AACTTCAAACTGATATATCTCGAGATCTAAGCCTCGAGCTCGTTCAGCTA
TTGTTGGAAAGAGTGGAAAATTCTGAGTAAGATAGGCCGTCCATACCGGC
GCCGTACCTACTGAAACGAGCGAGACGTTGTGCGGAATATTCTTAACTTT
TTATTTTTACAAAGTACATTTCTCTCGTCTGGAAAGGGTTAAGTCTTAAC
CACTTTGAAGATGAAGCAAGCAAAGTTTTTCAATATATTCAATGCTGAAC
CTGTAAAAATGAATTCAAATTCAGTAAATTCTCCACCCTCCCCATCCATT
TTTTTCTGGAAAAGCCCTGTTTTTTTTCACAAAAAGTGGCTTAGAATTTC
TAACATGATAGTACATTTTATCTGTAGGTATTTATTTATGTTCTAGTAAA
AC Coding sequence (CDS) from alignment at sc0000005_pilon:3005255..3008306- >MSTRG.1149.1.p1 ID=MSTRG.1149.1.p1|Name=MSTRG.1149.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2241bp|location=Sequence derived from alignment at sc0000005_pilon:3005255..3008306- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCATGAGTTTTGGCAAAGTTTGTATCGAAACACAACCAGACCAACA
AGAGAAACAAACTTCCGAACAAGGTTCGTCTGAATCAGAATCGTCATACA
AAACACCACAACAACTTTTCTCCTCCTTTCAAATCCCGGACATTGACTCA
CCGGCTGTTTCCGATACATCAACGGAATCACCTGATTCGCCTTGCTCACC
GGTTACTCAAAAATCACTGGAAAAATCACCGAAACTACAAAACATCAAAC
CCAACATTATTAAACATCCACCGACACAATTGAAATTAACTTCATCCTTC
CCAACGATGCATGCACCAAAAATTTTCCCAACTTCAGTTCAAGCAACACA
AACGACAGGAAAACCACTTCTCGTGCAAGGCCACGCCAACGCCCACGCCC
ATCAGCAATTTTATTTCATGAACCAAGGAGCTAACGGCTTTATCGGATAC
CAAACGCCCATCCCGCCCACCACCGCCTATCAACCAGGGATGTATGGCCT
CTCGTCACCTTTCGTTGATCCTCGATTTATTTTTTCGCCCCAGCCGCCAA
CCTCCGCCATCATTAAAAAAGACACTGCGGCAAATCCACCTTTATCTAAG
GAGATCAAAATGTTAGATTCCTCTCCTGCTTCCAGCTCTCTCAGACAAAC
ATGTGCCAATATACAAGGACAAATGGCGGCTAACCAAATCCCGTTGTGTT
TAGTACAAGATTCTCAAGGTCAACTACATCAACTTGTCTACACAGTCCCT
GAGAATCTATATGAAAAATACGTCACTGCAGCCAAGAAAGGCTTTAAAGT
CCGCGTCCAACCACACTTAGACAGTCTGAAAGTCGCTCTATCAAATAACG
CAACCTCCAAACCAAAAATTGAAGAAGAAAACGAGAAAAGAATATTTAAT
GATGAGGACTTAAAACTAGTGAAAGATATTAAATTAAACGAACAAACTTC
ACCGATGAAAACTGAAACGCAGGATATTGAAAAAATAATTAGCAAATCGA
AAGTGAAAGCACCCGAGAAAGGAACTAAGATATTAACCATGTCAGTATTG
GAGCAGCTTAAAGAAAATTCGTGCAATAAAAACGAAAAAGAACGATTAAC
AGTAACAAAGAATCCGACGACGACGGCAACGAGAAATGTGACGCCTTCTG
ACGTCAACAAATCGCACACTACAGTGAAAGGGACTTCACAGTTTTCATCA
ACTCAAGATGACAAGGATCTGTCAATTCATTCACAGGAGCAAATTGTCAC
CGAGAAGGGAGATATGAAGATAAATGACAAGACACCCATCAAAATTGATC
TGACATCATCACCTTGCACAGCGAGCGGTCATTTTGAGACGGAACAATCA
ATAGAAATAATTGATGAACCTTCCCCCACGCAACATAATAAAACTGTGTT
GAAAAGAAAAATTCAAAGCCCACCTTTGATGAACACCTCGGATGAAAAAA
TATCTTCTCTAAAAACATTGAGTGATCATCAGATCAAGTCACCTACTCCT
CTACCGAAAAATGATTTCGTTTTAGACGATCTGACTCAACCGAACGAATG
TAACGAACTTTATCATAACATAAATACGATCGATGGTATCCTAGCTAAGA
ACTCGAACGCTCTTATCCCAAAGTCTGACGTCGAGGCTTTGTTAAGATGT
TTGAAGCGTAAACTTGAGGAAAATGATATAGCTGAGCATTTAAGTAAGCG
ACACAAACTTCAGGAAAATAACGCACAATCTACACCAAACAAGTTATCTG
ACAACCGAAAGGCTTTCCATACAAAATGCAATAGTTATGATTATGATAGC
CTAGATATGCTCTCTCCCGAGTCTCTTCCAGAAGATGAAAATTCTGTCTT
CTATTCTAACACAGATATTCCAAGTGTATCTAGCTTGGGTTCCAGTAGCG
AGAAAATCGTACCAAGTGTAACTTCCAGTCTAGATGCATTTGATACTAGT
CTAACCGATTCTTCGCCGAATCTTCAAAATATGGGCGTTGATCAACATCT
GGATTTGTTTGATAATTTCAAAGACGATATTTTTAGTACAGATAGTTTTG
TTTATGGTGATATTTTACCGAACACAACCACAAACGATAAAATAATAACG
AAAAACACAAATTTCAATAATAACACAAACATTCAAGATAAATTAATCAA
CAGTACAGATAATTTCAGCTTTCCATCTGGTCAGCAGAATTACGATATGG
ATTTATTTGATCATTTATGGAGTGAATTAGATAATTTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:3005255..3008306 - |
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