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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:830019..834534+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11487.3.p1 ID=MSTRG.11487.3.p1|Name=MSTRG.11487.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4516bp|location=Sequence derived from alignment at sc0000083_pilon:830019..834534+ (Clytia hemisphaerica_ch_hm2_pilon)
CAATAGCAATGTGCCCTGATGATCAAGGATTAAGAAAAATCTTGATGTCA
TGATTTTACAAGGTTTGATTTATGTAGATATTACTAAGTATTACCAGAGA
AAgtacaaaattcaaaatcatatcatatcaaaatttataacaTACAAAAT
GAAAACCACAATGATTTTTGACCAGCAATTCCACCATATTAGTAGAAGAT
AAAATCCTTTAATACAAATTAAATCGAAAACGAAAACCAGCGATTCAGTC
AAGAAATCCAACAACATAGTGCTTACAAAATGTCAAAACCTTGACAGCAG
TGCATTAGCAGACGCAGTGGCACACAAAAACCAAGAAACAGGGATCGGAT
AAAGATAAGACGAGACAAAGAGAAACGACAAAATGATGCATTTCTTGTTT
ATTAAATGAGCGGCATGCAACTCTGTATTATAGTCAACGACTTCTTGTTT
GTGTGACacacttcttcttctttcttcaaagaaataaatattttattctt
cAACGATATGAAGTACTGATGTATGTATGTTTGACAAGCATTCAGATGTG
TTTTTTCTCTGCTCTCTCTCTGCTATGTGTGTGAATTTGAAGTTGTTATT
TAGTTCAAAATGTCATGTTTTGTTGAGTTTTTACAGTGATGGACACTCCA
TCTCTAATGTGAGTGACATTAGATAGGAATGGAGTAGATTCGACAGCTTG
ACGAGGTTGACCATAATTAGATTCTAGTGGTATATTTTGAGTTAATTATG
AGGTCAGGTTTCTGTAACTCGTGCTGATACACGATGATACAATTATGTAT
TGAACGTTCCCAAAGTTTTAGCCATTGCCAGTAGAGCTTTGCTTAACCGA
ACCATTTCAGAATATTCTTAATGGGCCAAATGAAGAGGTACTAATGATGA
TGAGGTATTTAATGGGACACaaattactttcaaaatgtGGTGAAACTAGT
GAATTGAGAGAGATGCAAATTCGTAACTCAAGTTTAGTTTGACACTCAGC
TGGAATAGCAGCACGTGGTATGAAATGAGAGCACCAGTGAAGAGAAATAT
AAAGTTAATCCAAGACAGATCAGGTTATTTAaaaagtgactgaatcaaat
aGGTCAACGCCATCACCTTGTTTTAGAAGTGAGCCCTTTGTGCCAAGTGA
CATCATTTCTGACGATTTGCAAAGCTTTTGCTTGATTTTAGTCAACAACG
TTAAAGCAAAATGTTCGTCTGAGCAAACAAGTCTATTTAGCAAAGCTTTC
ATTGCATTTTTGTCAGGTCATCGTCAAGTCATTTTAAGAAAGAAAGCAAG
GGTTTTACGCATaacaattttgttgaatttttgaTTAACAACTAGTCAAA
GAAAGAGTTGACACAAATAAATTATAACAAAGCCACATCAAAAAAGGGCG
TCCCTTCTAAAACAGTTAAACAATCCACTTTTATCCCGTTTGAGTGCAAT
GAGATTTTGTTTTTATCGAGCTTGCATAAGCTCTTGGTGCTACATTTTAT
ATGTAATAGTCAAGATGTCTACACCATTTTAAGAGAGGAGTTCCATGGTT
ATGGTCTCGTTAGcagaaaacacaaagaattatttCTTCTTTTGGTAGCT
AGAGAACAGTATTTGAGtactcaaaaagtcaaatacaCaaaaaaaaGCTC
GAGCTCAACGATAAAAGTTCTGttgctttcattttaaagtggtAGATAAA
AATCGAACgaattttgatgtaaaaaatcggtatttttgaaaaattgaaat
gttaCGACAAAAGCATATGGTATTTTTCACCTGGATACAGGACACTAATG
CAGGACACGTAAAGGTAAGAGATGGCGGGATGAGATGAGTTTTGAAATGA
TTTAAACTGAATATAGTATTCACATGGAAAATCTTGTACAAGGTTATCAA
AAGGTAAGTTACAAGCGAGAAAAGAGTGTTTTCACTCATAACTTTATCAT
TATAAAAAGAGCTTACacaaaaaatctattttggtatgatctttgaaatt
gaaatcgAAACCCCCGGCTTAATCAGACATCAAAGATATCCATGAATGAC
AAACCACCTTACATCATGGGAAAAATCTTGTctcaaacattcaaacaaac
atTGCTGTAATTATCATCATGTATTGGCTTTGAAACAACCTTTTCACTTC
ATTTCCAtcataaacaaatatttttcaaaaaatctgattCTTAATTATCG
AAAACCTCctcaaatttactaaaattaagaattattaaaataattatACC
TTTGATCAACAAACATGAACATTGAGGAGGGTTACTCAGCAAATAATTCC
AAAAAACTTTCTCACAGCAGGGGAATTTCTCATCAACCTTATCCTCCAGG
GCAGGCGCCCTCCCTATAATATATTTACacagatttcaaaaatgtaccTC
AATAAAGACACTGATCAAATTTACACCTTGAATTTCCCACCGAAAATGTA
ATCAATCTTGGACTTTATTATTTCAGTAATTTACTAAGTGTGTACTATGA
TCCTCAAACAGaatcaagatttttttgaacCTGTGCAAATAACTTCCTTT
TTCTGCAATCTTCTTCTCTTTCTGTTTTTACATGCTGATAGGTCtaagaa
aaatttgatattcATTTGGTTAATTAGAGATGAAAGGGGGGTTATAGTGT
GGAACCTTGCATTTCTTTGCTTAACTTATCGGCtattttacgccggccct
taatTGACGTAAGAAATCgggggggggATGAAAAAACTAAGCATAGGCGT
AATTAGGGTCGaaattaaattagggccggtgCAAAAGGGCCGCTAAGGTA
TACAATTCAAGTGCAACGACCTCATGACAAATGAAATACGCCATAAAGAC
GCCAAAAGTCTTGGATATAGCATAATCCTACCTTAAAGACTCGAGAGTAG
ACTCGATTACTCTACACTCTACTTAAAAAGTTCATATTTCCATGACAACA
AGACATGCTTTTTATTAATAAGAAAACAAGACTCAAAGTTGGCCTAAAAC
CCGAACCTCAGAATTCAGAAATTACTTTCATTAAAGATATTGTTTTTATG
ATGTAGAAAGGAGAAGTGCCACTTATGCTGACAAAAcataacaaaagaat
ttctcaaaatttgtgccCAAGCGGCATGGGAGTTGAGAGCATTTAGTCTT
TCTTTTACTTGAAAATGATGTGTAAGGAAATGTAGTAGAGGAGATACGTT
AAATAATGTCCTTTAagaaaatttcttctttctcaTAGGATTACAAGGAC
GTAGAAGATTTTGATCAGCCACTAAATCAAACGAAGAAACCATTCACAAA
AGAGCAATCAACACAACAAATAAACGACTTCTATTACATCGACGACATGT
CGGATAGTTATGACGAAAAATCGTACCATAAACGAGACGATTTAACATTA
CATTGCATCCCAGAGGAAGGCAGCGAATTGACGCACGAAAATTTCCGACA
CTCCGGTGTCCGACTACTACCGACGTACGGAAAGAACCACGACGAAACAC
AATCAAACGATTCAACATGTACATCAATTGAGGAAGGTGGTACTACCATT
ACCCGAACTGTAAGCCAAAACACCAAACGCAAGATATTTCTAGCAGTGTT
TTTATTCTTGGTGACGCTTTCACAAGGATTTATGGCGTGGTATGGAGCCG
AGAAGACCCGATGTAAAAAGACGACGACAAAGAGCGCCACATTGGCACCT
ATTTTCATGTTTGGTATTGCAGTTatcgaaatatttttctctactCTCGT
CATTACTATAACGTTCACACGAAAATTGAGAGAGAAATACAAAGTCTGTA
CTAACACTCGCCTCATTGTCAAACTGGTGACCGCTTGCTTGATAGTATTG
CTTCTTATCTATCTCTCGCTGGTGTGTTTTGTGGAGCTTTTCAGTGAAGA
ATATGATGGGTGTCGTTACAAAAAGATTCTGTTGAAAGCACAAGCCATAA
TGACTGTCGTCCAAGGCTGCTTATTTGTAATTCTGATATACATTTAAAGT
AACCTTTAGATTGGAAAGATGACTTTCTTTTAAGAACGATTCAATACACC
TATCATCCCTTCGCCACGCGGTCGGCTTTCAAGGAAATGACGTCGAAACA
CTTTTTCTATAAGGTTgacaatgcaacgacttcatgaattttgacgtcat
tccgTCCTGGTAAACTCGAATCCAGTCTCTAACGCTTTAAAGGTTGATAT
TGTTTGATGAAAAACAAGCACAGGAATTgttctttgaattatttgaaact
ttgattTCATGTAAATACGTACATGTacatattttatttcattttaacaA
CATTCATACATTTATAAAACTGTTCTTTTGATTCCTTATGGGTCTGCGTC
AATCTCCAAAAAAGAGtcaattttagaaatttctttgtaACTGTAGTTGG
CGCTCTCGAATTCGATTTTCAATTGGATGTTCATTGAATAAGGGAACATA
TCGAACAGTAGAACGTCGTTTAtatgagtttcttgttgacgatgaGTTTA
AATATTATCGAATTGt Coding sequence (CDS) from alignment at sc0000083_pilon:830019..834534+ >MSTRG.11487.3.p1 ID=MSTRG.11487.3.p1|Name=MSTRG.11487.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1650bp|location=Sequence derived from alignment at sc0000083_pilon:830019..834534+ (Clytia hemisphaerica_ch_hm2_pilon)
atgttaCGACAAAAGCATATGGTATTTTTCACCTGGATACAGGACACTAA
TGCAGGACACGTAAAGGATTACAAGGACGTAGAAGATTTTGATCAGCCAC
TAAATCAAACGAAGAAACCATTCACAAAAGAGCAATCAACACAACAAATA
AACGACTTCTATTACATCGACGACATGTCGGATAGTTATGACGAAAAATC
GTACCATAAACGAGACGATTTAACATTACATTGCATCCCAGAGGAAGGCA
GCGAATTGACGCACGAAAATTTCCGACACTCCGGTGTCCGACTACTACCG
ACGTACGGAAAGAACCACGACGAAACACAATCAAACGATTCAACATGTAC
ATCAATTGAGGAAGGTGGTACTACCATTACCCGAACTGTAAGCCAAAACA
CCAAACGCAAGATATTTCTAGCAGTGTTTTTATTCTTGGTGACGCTTTCA
CAAGGATTTATGGCGTGGTATGGAGCCGAGAAGACCCGATGTAAAAAGAC
GACGACAAAGAGCGCCACATTGGCACCTATTTTCATGTTTGGTATTGCAG
TTatcgaaatatttttctctactCTCGTCATTACTATAACGTTCACACGA
AAATTGAGAGAGAAATACAAAGTCTGTACTAACACTCGCCTCATTGTCAA
ACTGGTGACCGCTTGCTTGATAGTATTGCTTCTTATCTATCTCTCGCTGG
TGTGTTTTGTGGAGCTTTTCAGTGAAGAATATGATGGGTGTCGTTACAAA
AAGATTCTGTTGAAAGCACAAGCCATAATGACTGTCGTCCAAGGCTGCTT
ATTTGTAATTCTGATATACATTTAAatgttaCGACAAAAGCATATGGTAT
TTTTCACCTGGATACAGGACACTAATGCAGGACACGTAAAGGATTACAAG
GACGTAGAAGATTTTGATCAGCCACTAAATCAAACGAAGAAACCATTCAC
AAAAGAGCAATCAACACAACAAATAAACGACTTCTATTACATCGACGACA
TGTCGGATAGTTATGACGAAAAATCGTACCATAAACGAGACGATTTAACA
TTACATTGCATCCCAGAGGAAGGCAGCGAATTGACGCACGAAAATTTCCG
ACACTCCGGTGTCCGACTACTACCGACGTACGGAAAGAACCACGACGAAA
CACAATCAAACGATTCAACATGTACATCAATTGAGGAAGGTGGTACTACC
ATTACCCGAACTGTAAGCCAAAACACCAAACGCAAGATATTTCTAGCAGT
GTTTTTATTCTTGGTGACGCTTTCACAAGGATTTATGGCGTGGTATGGAG
CCGAGAAGACCCGATGTAAAAAGACGACGACAAAGAGCGCCACATTGGCA
CCTATTTTCATGTTTGGTATTGCAGTTatcgaaatatttttctctactCT
CGTCATTACTATAACGTTCACACGAAAATTGAGAGAGAAATACAAAGTCT
GTACTAACACTCGCCTCATTGTCAAACTGGTGACCGCTTGCTTGATAGTA
TTGCTTCTTATCTATCTCTCGCTGGTGTGTTTTGTGGAGCTTTTCAGTGA
AGAATATGATGGGTGTCGTTACAAAAAGATTCTGTTGAAAGCACAAGCCA
TAATGACTGTCGTCCAAGGCTGCTTATTTGTAATTCTGATATACATTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:830019..834534 + |
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