MSTRG.1146.1.p1 (mRNA) -

Overview
NameMSTRG.1146.1.p1
Unique NameMSTRG.1146.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000005_pilon:2996570..2998346+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1146.1.p1 ID=MSTRG.1146.1.p1|Name=MSTRG.1146.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1777bp|location=Sequence derived from alignment at sc0000005_pilon:2996570..2998346+ (Clytia hemisphaerica_ch_hm2_pilon)
TGGTTTGTGTTTTATAACTGATTATTCAAGGATTCAAGACATCATGcaca aaaacaaacagacaTCAGACAATCTGAGTCATTATTTACAAGTCTTGAAT CTAAAACGCGGTGTTACTCCAGTAGATGAGAGTTAGGCATCAGTGATCAC AAAGTCTCATTTGTTGGTATATGTTGACCTGACCATGCCAGGGATTTGGT GACCAGGTTGATTAGAAGAGGATGGCTCGAACATCAAATGACTGGAAGAA GAAAGTTGAATTTtatagtgaaaaatttgaaaatgcatTTCCAGATATTG TCAACGAGCTTGTAGGTGACGATGAAGCGAAACCTGAATTGAGAGAAGCC GCTGCTCGTTTACGTAAATCCATCGAGTATAATACATTTGGTGGTAAAAG ATTTCACGGGCTAACCGTCATCTTAACCGTTGATTTTTTACGGAACGGTA AATTATCAGAAGATGAAATCAAGAAGGGTATTTATTTGGGTTGGTGTTTT GAGATTCTGAAAGCTGTTTTCTTGATTGCCGATGATATTATGGATGGGTC TGAATTGAGGCGTGGTCGACCATGCTGGCATAAAAAGGTGGGGCTGGTTT CTATCAACGAAACTTATTTGATGGAACAATGCATTTACGCTctgattgaa aaacattttaaagaggAATCCTATCTTTTTGAACTGTATAAAACTTTTCA TAGAGTTTCATACCTTTTGGTGATGGGACAAGAACTGGATATGGTAACAT CCGAAAAAATTGATGGAGAATTAAACATAGATTCCTTTACTGAGGAGAAA TTTCAAACGATAGCCAAATACAAGACTGGATATTCCTTTTTCTACCTACC CGTCTGTCTTGGCTTTCACGTTGCAAAAGTTACAGACCCAAAGATTTTCA CGGAAGCCGAAACAATTCTATTGGAATTAGGGGAATATTTCCAAGTacaa aatgattattttgattGTTATGGGGATCCATCGGTTACCGGCAAAATAGG GTGTGATATCGAAGACGCGAAATGCTCATGGTTTATTACTCaagctttga aaaagtccaacgaagaacaaaaagaaatcTTGAAAGCGAATTACggaaat gatgacgtcacatcaGTAGCCGTTGTCAAGGAGATTTACGAAATCTTAGA AATGGAGAAGAGCTACTTTACATACAAGGAAAAGAGTCACAACTCGTTAC AAAATCTGGTTCAATCTCTAGGCAGtcattttcctaaagaattATTTCAA TTCTTTGTTATGAAAGTATTTGGGAGAAACACTTAAAACCATTTCAAATG GATTAGCATGTATATCCttttctggggggggggaggacggTCGGAGGAAG ACGGGCGGAGGAAGACGGTTAATAGATTTTGCCAGTCAAAGCTGAGAGTT TTTCCTAATCATTTCAGTCACTCATGTCGTCATAGCGGTAGAGACATAAG CTCGCTATATTAACAGCGTTGGTCTGTCAGACAATCCCAGTGACGTCATA AACTTGAATTTTTTGCTCTGGTGGTCATTACATTTAGTTTGAGTCTGaga aaaaatatcttcaacaaCTTGCGAAAAAGTTAGAATCAAcgatttaaaaa tttcaatgaatCCTCGAAATGAGATAAACAAAGTTGTTAATATTTTAATT GATGTTTATAAATAAGATGTATGTAGAAACAGATAACAATCGGTCATTAA TTCTTTCTTTATAAAACGTATATCAGTAATAAGAGCTagttactttataa gaacatttgaatACGATTGTATTTTGG

Coding sequence (CDS) from alignment at sc0000005_pilon:2996570..2998346+

>MSTRG.1146.1.p1 ID=MSTRG.1146.1.p1|Name=MSTRG.1146.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1065bp|location=Sequence derived from alignment at sc0000005_pilon:2996570..2998346+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCGAACATCAAATGACTGGAAGAAGAAAGTTGAATTTtatagtga
aaaatttgaaaatgcatTTCCAGATATTGTCAACGAGCTTGTAGGTGACG
ATGAAGCGAAACCTGAATTGAGAGAAGCCGCTGCTCGTTTACGTAAATCC
ATCGAGTATAATACATTTGGTGGTAAAAGATTTCACGGGCTAACCGTCAT
CTTAACCGTTGATTTTTTACGGAACGGTAAATTATCAGAAGATGAAATCA
AGAAGGGTATTTATTTGGGTTGGTGTTTTGAGATTCTGAAAGCTGTTTTC
TTGATTGCCGATGATATTATGGATGGGTCTGAATTGAGGCGTGGTCGACC
ATGCTGGCATAAAAAGGTGGGGCTGGTTTCTATCAACGAAACTTATTTGA
TGGAACAATGCATTTACGCTctgattgaaaaacattttaaagaggAATCC
TATCTTTTTGAACTGTATAAAACTTTTCATAGAGTTTCATACCTTTTGGT
GATGGGACAAGAACTGGATATGGTAACATCCGAAAAAATTGATGGAGAAT
TAAACATAGATTCCTTTACTGAGGAGAAATTTCAAACGATAGCCAAATAC
AAGACTGGATATTCCTTTTTCTACCTACCCGTCTGTCTTGGCTTTCACGT
TGCAAAAGTTACAGACCCAAAGATTTTCACGGAAGCCGAAACAATTCTAT
TGGAATTAGGGGAATATTTCCAAGTacaaaatgattattttgattGTTAT
GGGGATCCATCGGTTACCGGCAAAATAGGGTGTGATATCGAAGACGCGAA
ATGCTCATGGTTTATTACTCaagctttgaaaaagtccaacgaagaacaaa
aagaaatcTTGAAAGCGAATTACggaaatgatgacgtcacatcaGTAGCC
GTTGTCAAGGAGATTTACGAAATCTTAGAAATGGAGAAGAGCTACTTTAC
ATACAAGGAAAAGAGTCACAACTCGTTACAAAATCTGGTTCAATCTCTAG
GCAGtcattttcctaaagaattATTTCAATTCTTTGTTATGAAAGTATTT
GGGAGAAACACTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1146MSTRG.1146Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1146.1.p1.exon1MSTRG.1146.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1146.1.p1MSTRG.1146.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005_pilongenomesc0000005_pilon:2996570..2998346 +