MSTRG.11455.1.p1 (mRNA) -

Overview
NameMSTRG.11455.1.p1
Unique NameMSTRG.11455.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000083_pilon:309167..311562-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11455.1.p1 ID=MSTRG.11455.1.p1|Name=MSTRG.11455.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2396bp|location=Sequence derived from alignment at sc0000083_pilon:309167..311562- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAACAAATAAAATCTTCCTAAATAATAAATTTCAAACTCTGTCTAAAT
CCTTACCTGCAGTTTCTGTTTTTAAGAAAATAGATGAGTTCCATCGCAGA
GATTCTTGGCAGGCACATTAAGAGGTTGTTTGTTACAGTTCAATAAGTAT
CCCACTCGAAAAATACTCAAAGGGAAATTGACCTCAAATTACGAAGACAC
TCTGTATTGTTAAACACACTTCTCAATTTTTAATCAGAGATACGTAGCAT
CTTTTAAGAGGTATATATAATACTCAAGATTCGCTTTCAAAGTCATAAGG
AACAACACATCAATCATAGAAGGACAGACGACTGTAATATCTCTACGACA
CCAAAACAAAGTAAAGGCAACAAATCTAACGTTATTTTTAAACTCATTTT
TGAAAGGAAGGACGATGAAGTATTCCTTAAAAGCTTCCATTGTGGTGTTA
TTTGTGACTCTAATGGTCAATGGTAAATCAATCGACATTGATGATTACGT
TAAATGCCAAGCATACGATCATCCAAGACTTCTAAAAAAAGAAGGATGTC
TGGATATAACGATCCCGGATAAAATGTGTAAAGGTGGCTGCATCTCACAA
GCATTCCCAGAGCTGAAGAAAAATCACCAAGAAGAAATTGCAATCCAGGA
TGACAATGATGATAATCAAATCTTATCATTATCAGTTCGTCAAAACCAAT
GTCCAATGTGTTTACCAAAGAAAACAGCTAAAAGGACATTTGCAATGAAA
TGTAAAAAGCAGAATGTAAATCAACGACCAGCACAATTATCATCGTCATC
TTCTTCAGCTTCATCGACGACAGCACGGTTTGTTGATGAGGATACCGATC
GCGATGTTGGTACCGATTATGATGAGATAAGACAAGTTGAAGTGGACGTA
TTGGTTGAATGTCAATGTGTTCATGTTCCTTGCAATAAATGGATGAATAT
GAAGGAAATACAAAAACATTATAAAGCCCAACAATAAAGAGACAATTTTG
TCGGTGAGAGAAAAACTATCATTAGGTTCAACTTAAAACTCTAATTTTAT
GGTTTATATTTGCAAAAGGAGTGTATACTATACAGTGTGTTAAAAAAAAA
AACGGGATAGAATTTATATAAATAAGCACCCTCATGATTAGCGTCAATTT
TTATTACCTAAAATTATTGGATTCTTTTTTCAAAACCTGTGATTCTCTAA
TAATTTTTATCGAGTTTATAAAAAAAAAAGTTATATAAATTGTTTTCACT
TTTTTTTCCGGACATGCTGTGTGCCAACTCGACTACAAGGGTTTTTTTCA
TTAAATTACAACTTAGCCTGTCTGAGTACGTATAGCATTAATGTGTATGT
TTTAAATTTCCAATTCGATAGGATGGAAGCGAAAGTTTTCTAAAAAGAAT
TCTATTTTATCCAGATGATGCTTAGGATTTCATTGAAAGGCCTTTGTTTA
AGATTGTAGGACAAATAATTTCGCTCGGAGCTGATTTCTCATTCGTCAAA
TTATAGCAAGGTGAAATTTTTATTACACCAAATCAAGAAAATAAATCCAG
AAAATTTGATAACTTTTCAGTGCCGTAGCAACTGGGGGAGCTATGCCCCC
CCAATAACTTTTTCAAAAATGGTTATTTTGCAAAATGCAAAGTTCAGCTT
TTTTAATTTGTCATAATTTTTGTTTTGAGTGCATTTTCAAGCAATCTAGA
GCTCAAAATTTTCCTCTTGGCCCTCGCGGTGTCACCAAACTTAAGCCCCC
CCAAATGCTTCCTACGGCACTGCTTTTTGAGCCTTTTAATTAAATCCACC
AAAATGAATCAATTAAATCACAGCACAGTTGACATTGACGCTCTCTGATT
CGACATTCCATATTTTATATGCTCCATTATTCAATGATATTGAAAGTCCG
TCAACCAGAAACTCTAACATACAACACTCTACTATTCGATACGGCCGATA
CACCCGGGATACATTCCCTTGTTTTGATGAAAACCTAATTCCCCTTGAAA
ATTGAATTAGAGAGCGTCAACTGTAGTAAAAAGAAATATGTATAAAATAA
TTTTTATCATAGTGTCATACGTCTTATTAATTTTACCTTGATATATTTAT
TTTTCGTCTTTTGTATCTTGAAAAATATTTTACAAATATATTTTAAAATA
TAGTGGCTATTTATTTGAACTTTTTAATATCATATTTTAGCTGTTCCGGG
GTTCACTTAAGACTCTTTGATAGACTGAATGACACGCTTAAACCACTTCA
CTGCGAACTTAACATCATTCAAAATTATCAAAGAGCAAAGTTCGGCCAGA
AGTAGACTCAAATTCAATTTTTGACAAAACACTTTTAAAATAGTTTACAG
ACCAGAATTGTTATTTGGTACTTTGTAATACAGTATGTACAGAGTT

Coding sequence (CDS) from alignment at sc0000083_pilon:309167..311562-

>MSTRG.11455.1.p1 ID=MSTRG.11455.1.p1|Name=MSTRG.11455.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=573bp|location=Sequence derived from alignment at sc0000083_pilon:309167..311562- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTATTCCTTAAAAGCTTCCATTGTGGTGTTATTTGTGACTCTAAT
GGTCAATGGTAAATCAATCGACATTGATGATTACGTTAAATGCCAAGCAT
ACGATCATCCAAGACTTCTAAAAAAAGAAGGATGTCTGGATATAACGATC
CCGGATAAAATGTGTAAAGGTGGCTGCATCTCACAAGCATTCCCAGAGCT
GAAGAAAAATCACCAAGAAGAAATTGCAATCCAGGATGACAATGATGATA
ATCAAATCTTATCATTATCAGTTCGTCAAAACCAATGTCCAATGTGTTTA
CCAAAGAAAACAGCTAAAAGGACATTTGCAATGAAATGTAAAAAGCAGAA
TGTAAATCAACGACCAGCACAATTATCATCGTCATCTTCTTCAGCTTCAT
CGACGACAGCACGGTTTGTTGATGAGGATACCGATCGCGATGTTGGTACC
GATTATGATGAGATAAGACAAGTTGAAGTGGACGTATTGGTTGAATGTCA
ATGTGTTCATGTTCCTTGCAATAAATGGATGAATATGAAGGAAATACAAA
AACATTATAAAGCCCAACAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11455MSTRG.11455Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11455.1.p1.exon1MSTRG.11455.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11455.1.p1MSTRG.11455.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000083_pilongenomesc0000083_pilon:309167..311562 -