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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:304511..307875- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11454.1.p1 ID=MSTRG.11454.1.p1|Name=MSTRG.11454.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3365bp|location=Sequence derived from alignment at sc0000083_pilon:304511..307875- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGTGGTGTTGATTAAACCTCTCCTTCAAAATCTTGACATCAAAAAGTG
AATAATCTCAAAAAAATACTATAACACAAACATTACGCAGTTTTCAAACG
ATCCAGGAGAGAAAATGGTGACGAATTTAAAAAGGTGGAATTGCTTTACA
ATATCATTACTATTGCCATACTTTGCCACCGTCAACCAAGAAGTTTACGC
CGTTAGTTTGGAAGAAATCGAAAACAGTTGGCACAAAACAACAACAAAAA
TAATCCAAACGACCACAGCAACGATCAAACTTAAAATCCAACGATACAAA
GCATTCCCAAATCAAATGACTCGGGCTGGAGGTTACAAAAATGAAAAGAA
TCGATACACAATGAGAACATGTGCGGAGAAATGTACATCTGAAGCAACAT
GCGCAAGTTTTAGTTATGAGTTACCTGGTACTAACTGCAGAAGATTTTCA
GGTGTTTATGCTAATTCACAATCATCAGCTATATATACTGGTGGTAATGT
TCAATTCTTTGAGAAATTAAATCCTTGTAATAAGATACGAAATTTATGTG
AACATGGGAGTGAATGTGTACCTGATATCTTATCAAAGTCATATTCTTGT
ATCAATTGTTTTTCACCTTACACTGGTAAACATTGCAACGAATCCGGACC
AGTTCACAACCCAAACATCTCTGAAGGTAATTATGAATTAAATTATCTCT
GAAGGTATTTAAAGACTGGCATCCTAATCTAATCTGTTCATTTATCACGT
CAGAGGGTGGCAGGCATTTGCTAAAATAGGAGCTGCGTAGGAGAATAAGC
AAAAGTTGATGAGAGGGTGCTGATTAACATTGTACATTCAAGCCCTCCCG
CTGACAAACTTTCTTCCCACGCTAACCTAACTCCAACACTCACTTTTCCC
GCGTGATAGCGTTCCAGACCAACTGGCGCGTTATCTGGTACCAGATGTGG
AAATATGCTACGGTAATTTAAGCTCACCAGTAGACATTTTATAAATAAAA
CCGCGACGCTTAAGTACCTTGCTTTTACATATTGTCATGGCAATTTTGAG
CTAGCCGTATTAAAGAATTAAGTAAATAAAGTACTTGTTTTAGGTTAAAC
TTGTTCCTTTTTCTCAATAGATATTTTATATGGACGAAATGCATCGTGCC
GTGATTTGAAAAAAAATTTCCAGAATTATATGGCAGGTATGTATTGGATT
CACCCATGGAGAGATACAAGGAAAATCAAAGTAAACTGCAGTAAGTGTTT
TGGTTCTTTGTTATTACTAACCAATATGATCAAATCATTTCTTTTCTCCC
TTTACATAATTCTGCCCAACATAAAGAGACTTGAAGAGGTGGATGAAATC
AAACGTTCTGACGGTTGAGCCATACTGTATTCCGTATAAAAAACCCCGGT
CTGGAAGCATTTTGTTTCTTTCCAGTGTTCCTTACTTGAACTTACGTTAA
GAAATTAAAGTCTATTCAAGATAAGTGTGCACTAAATTTTGCTTTGCTTG
TTATTTCTCAACCAATGCTTCAATCTTAAAAAGTTTGGTATTGTTGGGAA
GGTAGGAAGGAGCTTATTAATTTACTGTTAGTTTTTTTCCGTGAAATTTG
AAAAGAACATGAAGAAAAATGAAGAGGCAAAAATTTAACTTTTTATAGAT
AGTTCGTATAAACGTTATTTTTATAATTAAAATAATTAAAAATTTGCAAT
ATTCGACGGATAAGATAAGAAACCACTTTGTCAACCCCGGAATTTTACAT
TGTGTAAGAAATGTCTTTTCAGAAAAATCAGTAAATCTACTTTACATTCT
GTCTGGAACCAGGGTCTTTTATACGCGGACTATGGTTAAGCGTTCAGAGA
AAAACGGAAGCGTGCTAGTAAAATAAATGTCCAAATAACATTCCGTAAAT
CCAGGCAATGTAGATGAACATTGACCCAAAGTAAAAAGCCTCTTCCAGAA
AAAAGAATTACACCATGGGTGAAGGATGTAATATTTTTCAGGTGTTAGCC
CCCTGGACATTCTGGCCTCCCGGAAAACTTTCTGATCCCCTTGGATAAAG
AATTTAAACCCCAGACAACCAGTTTGATCAACCGAACTTGAGCCCCCTAA
TATATCTTCTACCCCTATGTTCCTTTTCTGGAAGAGTCGAATCTGAGAAA
GAATAGGAAATATCAAACGTTTCTTTGATTTTCCAGATTTCGATGGTACA
ATGTTTATAACATCGATAATAAAAGATGATCCAAGTCCAATCCGGGAATT
ATTTGCAGAGGACCTTGAAGATGGATTAAATATATATGATGGCAACTTCA
GAGCACATCCATCTTTCGCTAGTAAACTCGAAAAACTAATTCGCTTCGAT
TTCTTGAAATTCAAATGCCAAAAAACTGGTGTTGGATTTGAAGTAAAAAT
CAAATCATTCAAATTGCACGAATGCTACAATGTTATGTTCTATTTTCTTG
GGGAAGCAACAATCGCAGACTCATCAAAATATTGTTTAAGAGGAAACTAT
AAATATACCAGTGCTTTGTATAATGAATGGCCTACAAAAGGTGTGCCGGC
AGACCTTAGGCTATTTAAAGATATTTTAATAAAAGACGATTCAACCAAGA
TGACTTTTACGAATGATTCAATGCAGTGTTTTGGTGATGAAGGAACTTGG
GATTTTTTTAATTTGAATATCGTATAAAATAATCATCTGAATGTTTATTT
TCAATAGCTGAGCACTTATTTTAACACAGCATAGATATTTTGGTTCATGA
CAGTTTCGTGACAGTACTTAAATCTTAGTCAACACGAGCCAGTAGCGGCC
TGGCTTAATTTTCTTGGTGGTGCAAATTATGAAATTGGCGCCCCTGGTAT
TTTTGTCCTTAATTGCGCCCTCCACCATTAAGTGAAAATATTAAACTGTA
AGAGCAGTGACTGGTTGAAAGTAACACCCGGAATCTCTGAGTTAACAAAC
TTTTATTTATACGAAGGTGGTGATAATGATAACGCGATATCTATTTCCTT
GTTATTTCCTGGTCCTACTTTACTGTCCATTAAAGATCAATGGCTGAAAG
AGGCCCCAAAAATTCGAAAGTTGGCAGGAATAAGGGTCCTTTGTAATTGT
GGCGCCGCAGGGAAAAAATTTGGTGTAAGAAAGGTCAAACAGATTAAAAG
ATATTCTAAAAAGGAGAAAGCATAAGACCACAAAAACCACAGCGAGCAGT
TTCGATCAGTCTCTCAGTTTGGGGGTGAGCATCCTCTTTAACCCCCGGTG
GATACACAACACTTCTCTTGCTTTGACCTTTCGCAATTCAATGTTGATAG
CAGTTTTGTAAAAATTCGTAAAATACAAACGAAGCACCGCAGGCGAAAAA
GAAGAAGGCGCTAAA Coding sequence (CDS) from alignment at sc0000083_pilon:304511..307875- >MSTRG.11454.1.p1 ID=MSTRG.11454.1.p1|Name=MSTRG.11454.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3519bp|location=Sequence derived from alignment at sc0000083_pilon:304511..307875- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTCGATGGTACAATGTTTATAACATCGATAATAAAAGATGATCCAAGT
CCAATCCGGGAATTATTTGCAGAGGACCTTGAAGATGGATTAAATATATA
TGATGGCAACTTCAGAGCACATCCATCTTTCGCTAGTAAACTCGAAAAAC
TAATTCGCTTCGATTTCTTGAAATTCAAATGCCAAAAAACTGGTGTTGGA
TTTGAAGTAAAAATCAAATCATTCAAATTGCACGAATGCTACAATGTTAT
GTTCTATTTTCTTGGGGAAGCAACAATCGCAGACTCATCAAAATATTGTT
TAAGAGGAAACTATAAATATACCAGTGCTTTGTATAATGAATGGCCTACA
AAAGGTGTGCCGGCAGACCTTAGGCTATTTAAAGATATTTTAATAAAAGA
CGATTCAACCAAGATGACTTTTACGAATGATTCAATGCAGTGTTTTGGTG
ATGAAGGAACTTGGGATTTTTTTAATTTGAATATCGTATAAATATTTTAT
ATGGACGAAATGCATCGTGCCGTGATTTGAAAAAAAATTTCCAGAATTAT
ATGGCAGGTATGTATTGGATTCACCCATGGAGAGATACAAGGAAAATCAA
AGTAAACTGCAATGGTGACGAATTTAAAAAGGTGGAATTGCTTTACAATA
TCATTACTATTGCCATACTTTGCCACCGTCAACCAAGAAGTTTACGCCGT
TAGTTTGGAAGAAATCGAAAACAGTTGGCACAAAACAACAACAAAAATAA
TCCAAACGACCACAGCAACGATCAAACTTAAAATCCAACGATACAAAGCA
TTCCCAAATCAAATGACTCGGGCTGGAGGTTACAAAAATGAAAAGAATCG
ATACACAATGAGAACATGTGCGGAGAAATGTACATCTGAAGCAACATGCG
CAAGTTTTAGTTATGAGTTACCTGGTACTAACTGCAGAAGATTTTCAGGT
GTTTATGCTAATTCACAATCATCAGCTATATATACTGGTGGTAATGTTCA
ATTCTTTGAGAAATTAAATCCTTGTAATAAGATACGAAATTTATGTGAAC
ATGGGAGTGAATGTGTACCTGATATCTTATCAAAGTCATATTCTTGTATC
AATTGTTTTTCACCTTACACTGGTAAACATTGCAACGAATCCGGACCAGT
TCACAACCCAAACATCTCTGAAGATTTCGATGGTACAATGTTTATAACAT
CGATAATAAAAGATGATCCAAGTCCAATCCGGGAATTATTTGCAGAGGAC
CTTGAAGATGGATTAAATATATATGATGGCAACTTCAGAGCACATCCATC
TTTCGCTAGTAAACTCGAAAAACTAATTCGCTTCGATTTCTTGAAATTCA
AATGCCAAAAAACTGGTGTTGGATTTGAAGTAAAAATCAAATCATTCAAA
TTGCACGAATGCTACAATGTTATGTTCTATTTTCTTGGGGAAGCAACAAT
CGCAGACTCATCAAAATATTGTTTAAGAGGAAACTATAAATATACCAGTG
CTTTGTATAATGAATGGCCTACAAAAGGTGTGCCGGCAGACCTTAGGCTA
TTTAAAGATATTTTAATAAAAGACGATTCAACCAAGATGACTTTTACGAA
TGATTCAATGCAGTGTTTTGGTGATGAAGGAACTTGGGATTTTTTTAATT
TGAATATCGTATAAATATTTTATATGGACGAAATGCATCGTGCCGTGATT
TGAAAAAAAATTTCCAGAATTATATGGCAGGTATGTATTGGATTCACCCA
TGGAGAGATACAAGGAAAATCAAAGTAAACTGCAATGGTGACGAATTTAA
AAAGGTGGAATTGCTTTACAATATCATTACTATTGCCATACTTTGCCACC
GTCAACCAAGAAGTTTACGCCGTTAGTTTGGAAGAAATCGAAAACAGTTG
GCACAAAACAACAACAAAAATAATCCAAACGACCACAGCAACGATCAAAC
TTAAAATCCAACGATACAAAGCATTCCCAAATCAAATGACTCGGGCTGGA
GGTTACAAAAATGAAAAGAATCGATACACAATGAGAACATGTGCGGAGAA
ATGTACATCTGAAGCAACATGCGCAAGTTTTAGTTATGAGTTACCTGGTA
CTAACTGCAGAAGATTTTCAGGTGTTTATGCTAATTCACAATCATCAGCT
ATATATACTGGTGGTAATGTTCAATTCTTTGAGAAATTAAATCCTTGTAA
TAAGATACGAAATTTATGTGAACATGGGAGTGAATGTGTACCTGATATCT
TATCAAAGTCATATTCTTGTATCAATTGTTTTTCACCTTACACTGGTAAA
CATTGCAACGAATCCGGACCAGTTCACAACCCAAACATCTCTGAAGATTT
CGATGGTACAATGTTTATAACATCGATAATAAAAGATGATCCAAGTCCAA
TCCGGGAATTATTTGCAGAGGACCTTGAAGATGGATTAAATATATATGAT
GGCAACTTCAGAGCACATCCATCTTTCGCTAGTAAACTCGAAAAACTAAT
TCGCTTCGATTTCTTGAAATTCAAATGCCAAAAAACTGGTGTTGGATTTG
AAGTAAAAATCAAATCATTCAAATTGCACGAATGCTACAATGTTATGTTC
TATTTTCTTGGGGAAGCAACAATCGCAGACTCATCAAAATATTGTTTAAG
AGGAAACTATAAATATACCAGTGCTTTGTATAATGAATGGCCTACAAAAG
GTGTGCCGGCAGACCTTAGGCTATTTAAAGATATTTTAATAAAAGACGAT
TCAACCAAGATGACTTTTACGAATGATTCAATGCAGTGTTTTGGTGATGA
AGGAACTTGGGATTTTTTTAATTTGAATATCGTATAAATATTTTATATGG
ACGAAATGCATCGTGCCGTGATTTGAAAAAAAATTTCCAGAATTATATGG
CAGGTATGTATTGGATTCACCCATGGAGAGATACAAGGAAAATCAAAGTA
AACTGCAATGGTGACGAATTTAAAAAGGTGGAATTGCTTTACAATATCAT
TACTATTGCCATACTTTGCCACCGTCAACCAAGAAGTTTACGCCGTTAGT
TTGGAAGAAATCGAAAACAGTTGGCACAAAACAACAACAAAAATAATCCA
AACGACCACAGCAACGATCAAACTTAAAATCCAACGATACAAAGCATTCC
CAAATCAAATGACTCGGGCTGGAGGTTACAAAAATGAAAAGAATCGATAC
ACAATGAGAACATGTGCGGAGAAATGTACATCTGAAGCAACATGCGCAAG
TTTTAGTTATGAGTTACCTGGTACTAACTGCAGAAGATTTTCAGGTGTTT
ATGCTAATTCACAATCATCAGCTATATATACTGGTGGTAATGTTCAATTC
TTTGAGAAATTAAATCCTTGTAATAAGATACGAAATTTATGTGAACATGG
GAGTGAATGTGTACCTGATATCTTATCAAAGTCATATTCTTGTATCAATT
GTTTTTCACCTTACACTGGTAAACATTGCAACGAATCCGGACCAGTTCAC
AACCCAAACATCTCTGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:304511..307875 - |
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