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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:236916..241136+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11449.1.p1 ID=MSTRG.11449.1.p1|Name=MSTRG.11449.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4221bp|location=Sequence derived from alignment at sc0000083_pilon:236916..241136+ (Clytia hemisphaerica_ch_hm2_pilon)
taaaaatctgctcgcctacacaaattttgtgccccccccccttgtctacg
ctactgaaaaCTTTATTTCCGGGCCCACAAACTTTATCTCCTTTTCATAG
GATTGAATTACAGAAAACGTATGTTTGACGTTCGATGCAAGGGAAGTGAA
TCGGAATTATCGGAATGTTCTTATTCCGATTATTCCCGATGTCGTTATTA
TGATATGGCTAGCGTCATTTGTACACAATGTGAGTAATTATTTGATTGTT
ATCGTTAGAATATTTGTCGGTGAAATATTGCTTAAGAAAAATTGACCAAC
CcggttttctttttgaaaaccaCGCATATACTCTTAGGTGCCAAATAAAc
gccaccccccccccgtttattaatttttacaagaatattttcagttgaca
aaaagaagtccccttattttgctccaaaaagcctaaTTTTAGCCTATTAT
TTACCTTATGGGTTTTCagaggtacaatttccaaccccaccggcaattag
gtccccctgtTTATaaagatttcgaaaattttctaacccccatccccccc
atttatttggcacctaagagtatgccGGTCATGCGTTTCGGATATTGTAT
AAGATGCTTCATTCCACATTCAtaagttttttctttctctaGCCACAAAC
TCAATGGTTATAATAGCATGGCACTTTTTCTCCCTGCTTTTCTTCTGTTC
CTCACCATAATGGTCTCAAAATTGGAACCTGGTAAACAATACAACGAAAA
TTAGCCAAATATCATGGTACACTATATCAAGTAAAACACGTGCAAAGATT
AAACCTTTAAACTTGTACATTATGAAAATGTTCTACATTTATACTAAAGG
CGTTCTTCCAGCTTTCCTTTGTAAATGTTTTCTAATGATATTTTCAAACC
ATAGATGCACCAGACCTGGTCATGGACATTCGCTTATTCAAACAGAGCAT
CAAAGTGGACACACATCCTCTCCATCATTTACGTTGTTCCTTCGAAGAAA
GATGCCTTTCACCTGAGGTGGATAATATTTGGGGTAGAAGTGGTTTCCAT
AACAGacacttgttaaaatttacatCAAGGTAAGAGTTTAAGTATGTTCT
TAATTTGCGACCGAAGTCGTACCGAAGGTTGACCCTTTTCCCTTGtacaa
aatgatgaaatacATTTGACAAACCTTGAGCACCACAGCTCTATCATATA
GCTATACTCTATACTGTCGTTATGTCTTTTATATTTCTGAggcaaaattt
gctttgaccacttcTTGTCGAATCTTGTTAAGTTCTCCTGTGAGACTAAC
cattatatttttcactttaggTTCTTAAACAAAGGAGCGGTAACATTTCG
ACCACACATCGATAAATCATCATGGCAATGGCACCAATGTCATGAACATT
ACCATTCAATGGAAACATTCGCCATCTATGATTTGATCGGTAAGATATTC
GATTCCGCATTGGGCTGTTCCAAAAAacttccatacaggggggtggacga
accttttcaagtcaaaaaaaaattcttggaaatgtgtggatacccctgga
aaatagcaaaatttgcaaaaatgaccctggaaaaattattttcatctttt
aaagGTGATGGTGGACGAACTAATATCAGTCGTTTACCCCCTGGAAGCTT
AAGAatagcttttaccccctggaaacaTGAAAAACACTCCCCCATCCCCC
TGTATGGTTATAACCAAAATGGAAGGGTCCATTTTCGTAAACTTATTTCG
ACTGGATACCTAGGCTGTAaaccttgtttttatttttgatgtttctggtt
TACCGCTTGGTGTTCTTAAGAGATTTACATTTCAATATCAGAAGTTAGCG
CATGCGTGTTTTGTCGGTTGATTGCCCTGGGTTCGAGGGTGGCAAAGACC
CAGAATTACCAAACAACTCTTTGGGCTATAGCTTACTAAGGTTGAACGAT
GGCAAAAACCTTTATCTGTGAGTGCTTCAATACAGTGACGCCTCATATTT
GGCCTCACTATATCCTTTAACCTGGTACCCTTACCCGTACCCGTATCCTT
TTCGTGCAGATTTTGttggaaatatttacagaagtACTACAATCAATGCA
ATGATATATTGGCACCAGCCTCaaaaaaaCACTGGATTTATTCACTTCCC
TCTCCTAAATCTCCTCCCCCTAATTTCAATggttgaagaagaagaaggcg
ACAGGGCTGCAGACTCAACCATTGAAGCTTGCgggggggAGGGGAAATAA
GTTTTAACATAAAAAATCAGTGTTTACTGCCAAATATTATTGCAGTGATT
GTAGAAACACGATTGGTCGATtataaatttaagaaaacattttctctttt
cGAATTATATCAGATAACAACGGTTACCGTATTGCGCATGGGCAGAAAGC
CAGTTTTTGTTTAGAAGATTCTGACTGCGAACCAGGATACAAGAAGAATT
TCAATTGTACTGATAAAGGTGACCAGGGTATTACTGTCAATTGTGCTGAT
AATTACAGTAATCGAATTGATTGCCAATGGATAGATGTTACAAATGTACC
CTTTGGAAATTACTCCTTGAGAGTTGATGCTAACCCTTTAAGGAATGTTA
CCGAAAGTGATTGGTTGAATAATAGAGCAGTCTGTGAAATCGGATATTTT
AATCGCGATGATATTATTGTGAGAGGTTGCACGACAGGTATGCTCTtcta
ttgggctcttccagaaaatgttcgtacatggggggtagaagatatagtgt
ccgggggatAGTGAAAAATCCACAACATTTGCCTTGTCCAGgaggtaaac
ttgctctgtttgggggtaattttgctctgtttgaggatAATTTGGATGTC
CAGGGGTCAACTGAtgtttgtccggggggggggggggttggacctgctgt
ccagggggtaaattttcaaaaaatgttatgtcctacaccccccatattca
aaatatttctgtaTGAGCCCATTTCTATTATCTTTGATAATAGCATCGAC
ACTACTATCCAGTGAAGTTCCCTTCACTAATGCTAGCTTCACTGTTCTTC
TGGACAAAGCTTAAGGCTTGGTTACagatcattgagtttaaagcccgaag
ggctagaggaaaaactttaagccttctcaggcaagaaaaagtgaagccac
ttatttcctacCCAAAACGCACCGTAATCATGACCACGGATTTTATCTAG
GGCCTCCttttttttgaggactgcatttttttaaatctagcgatagatat
tagtttcaatccggcgttttgTGTAAATGCCACGCCTGGgtttctggatg
ggaaataaatgatttcaattcccatccaggagtctcaagtctagcccttc
gggcttggaagtcaatgataCAGCCTGATGttctttatatagtttgttct
tatgaaaaaaacgagTATTTATTTTTAGATCCTTGTTATCAAGAATCGTT
TGGTGGAAATTCTTTTGGTCATTGTTGTCAATTTCCATTCGTGTACAATG
GACAATTACATTATCAATGTATACAAAAGAACAATAGTTCTGAGAACAAT
GGAAACAATAGCGAATTAAACAATGAAAATAGATCTTGGTGTTCGACCAC
TAATGATTTCGATCAGGATGGAAAATGGGGATATTGTagtgaaaaaatct
gaaaaggaaatttacatacacgtttttttaataagaacatctataatttt
tgaagcctacaaatgttcttaaatttttgggtttcaagcctaaaaatgtt
cttaaaatgttcttattttaaccattttgcgaccatttttacccattttc
ctaggAAAACGGGTGTATTTGAGtctgcaaagctttaaaatgttcttacc
ttgttcttagcattttggccatcgaagccttatgttctatatagtttgtt
cttataaaagaaacgtgtatgACTAACATTTTAGCCAGTAACAAAGCTTT
GCTCtccactctttttttataagaatcagtaaatTGTTCTTGAGGTTCAg
ctattcttttttttcaggcaaTTTGAatcttattcttatttttagggaTA
TAACAGGCTTTATACCCgattttactactttgaccctaAACGTGTTCCCA
ATTCAGAAATTCCAAGCTCACACTGCACTAAAACTGTTTTAAGAATTGTA
TCATAAAGAAAAGATTGTGCCTTACAAAACACGACAGCATTGTGACACAG
TTGTATCGTTGTTGATAGATA Coding sequence (CDS) from alignment at sc0000083_pilon:236916..241136+ >MSTRG.11449.1.p1 ID=MSTRG.11449.1.p1|Name=MSTRG.11449.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4755bp|location=Sequence derived from alignment at sc0000083_pilon:236916..241136+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGACGTTCGATGCAAGGGAAGTGAATCGGAATTATCGGAATGTTC
TTATTCCGATTATTCCCGATGTCGTTATTATGATATGGCTAGCGTCATTT
GTACACAATATGCACCAGACCTGGTCATGGACATTCGCTTATTCAAACAG
AGCATCAAAGTGGACACACATCCTCTCCATCATTTACGTTGTTCCTTCGA
AGAAAGATGCCTTTCACCTGAGGTGGATAATATTTGGGGTAGAAGTGGTT
TCCATAACAGacacttgttaaaatttacatCAAGgTTCTTAAACAAAGGA
GCGGTAACATTTCGACCACACATCGATAAATCATCATGGCAATGGCACCA
ATGTCATGAACATTACCATTCAATGGAAACATTCGCCATCTATGATTTGA
TCGATAACAACGGTTACCGTATTGCGCATGGGCAGAAAGCCAGTTTTTGT
TTAGAAGATTCTGACTGCGAACCAGGATACAAGAAGAATTTCAATTGTAC
TGATAAAGGTGACCAGGGTATTACTGTCAATTGTGCTGATAATTACAGTA
ATCGAATTGATTGCCAATGGATAGATGTTACAAATGTACCCTTTGGAAAT
TACTCCTTGAGAGTTGATGCTAACCCTTTAAGGAATGTTACCGAAAGTGA
TTGGTTGAATAATAGAGCAGTCTGTGAAATCGGATATTTTAATCGCGATG
ATATTATTGTGAGAGGTTGCACGACAGATCCTTGTTATCAAGAATCGTTT
GGTGGAAATTCTTTTGGTCATTGTTGTCAATTTCCATTCGTGTACAATGG
ACAATTACATTATCAATGTATACAAAAGAACAATAGTTCTGAGAACAATG
GAAACAATAGCGAATTAAACAATGAAAATAGATCTTGGTGTTCGACCACT
AATGATTTCGATCAGGATGGAAAATGGGGATATTGTagtgaaaaaatctg
aATGTTTGACGTTCGATGCAAGGGAAGTGAATCGGAATTATCGGAATGTT
CTTATTCCGATTATTCCCGATGTCGTTATTATGATATGGCTAGCGTCATT
TGTACACAATATGCACCAGACCTGGTCATGGACATTCGCTTATTCAAACA
GAGCATCAAAGTGGACACACATCCTCTCCATCATTTACGTTGTTCCTTCG
AAGAAAGATGCCTTTCACCTGAGGTGGATAATATTTGGGGTAGAAGTGGT
TTCCATAACAGacacttgttaaaatttacatCAAGgTTCTTAAACAAAGG
AGCGGTAACATTTCGACCACACATCGATAAATCATCATGGCAATGGCACC
AATGTCATGAACATTACCATTCAATGGAAACATTCGCCATCTATGATTTG
ATCGATAACAACGGTTACCGTATTGCGCATGGGCAGAAAGCCAGTTTTTG
TTTAGAAGATTCTGACTGCGAACCAGGATACAAGAAGAATTTCAATTGTA
CTGATAAAGGTGACCAGGGTATTACTGTCAATTGTGCTGATAATTACAGT
AATCGAATTGATTGCCAATGGATAGATGTTACAAATGTACCCTTTGGAAA
TTACTCCTTGAGAGTTGATGCTAACCCTTTAAGGAATGTTACCGAAAGTG
ATTGGTTGAATAATAGAGCAGTCTGTGAAATCGGATATTTTAATCGCGAT
GATATTATTGTGAGAGGTTGCACGACAGATCCTTGTTATCAAGAATCGTT
TGGTGGAAATTCTTTTGGTCATTGTTGTCAATTTCCATTCGTGTACAATG
GACAATTACATTATCAATGTATACAAAAGAACAATAGTTCTGAGAACAAT
GGAAACAATAGCGAATTAAACAATGAAAATAGATCTTGGTGTTCGACCAC
TAATGATTTCGATCAGGATGGAAAATGGGGATATTGTagtgaaaaaatct
gaATGTTTGACGTTCGATGCAAGGGAAGTGAATCGGAATTATCGGAATGT
TCTTATTCCGATTATTCCCGATGTCGTTATTATGATATGGCTAGCGTCAT
TTGTACACAATATGCACCAGACCTGGTCATGGACATTCGCTTATTCAAAC
AGAGCATCAAAGTGGACACACATCCTCTCCATCATTTACGTTGTTCCTTC
GAAGAAAGATGCCTTTCACCTGAGGTGGATAATATTTGGGGTAGAAGTGG
TTTCCATAACAGacacttgttaaaatttacatCAAGgTTCTTAAACAAAG
GAGCGGTAACATTTCGACCACACATCGATAAATCATCATGGCAATGGCAC
CAATGTCATGAACATTACCATTCAATGGAAACATTCGCCATCTATGATTT
GATCGATAACAACGGTTACCGTATTGCGCATGGGCAGAAAGCCAGTTTTT
GTTTAGAAGATTCTGACTGCGAACCAGGATACAAGAAGAATTTCAATTGT
ACTGATAAAGGTGACCAGGGTATTACTGTCAATTGTGCTGATAATTACAG
TAATCGAATTGATTGCCAATGGATAGATGTTACAAATGTACCCTTTGGAA
ATTACTCCTTGAGAGTTGATGCTAACCCTTTAAGGAATGTTACCGAAAGT
GATTGGTTGAATAATAGAGCAGTCTGTGAAATCGGATATTTTAATCGCGA
TGATATTATTGTGAGAGGTTGCACGACAGATCCTTGTTATCAAGAATCGT
TTGGTGGAAATTCTTTTGGTCATTGTTGTCAATTTCCATTCGTGTACAAT
GGACAATTACATTATCAATGTATACAAAAGAACAATAGTTCTGAGAACAA
TGGAAACAATAGCGAATTAAACAATGAAAATAGATCTTGGTGTTCGACCA
CTAATGATTTCGATCAGGATGGAAAATGGGGATATTGTagtgaaaaaatc
tgaATGTTTGACGTTCGATGCAAGGGAAGTGAATCGGAATTATCGGAATG
TTCTTATTCCGATTATTCCCGATGTCGTTATTATGATATGGCTAGCGTCA
TTTGTACACAATATGCACCAGACCTGGTCATGGACATTCGCTTATTCAAA
CAGAGCATCAAAGTGGACACACATCCTCTCCATCATTTACGTTGTTCCTT
CGAAGAAAGATGCCTTTCACCTGAGGTGGATAATATTTGGGGTAGAAGTG
GTTTCCATAACAGacacttgttaaaatttacatCAAGgTTCTTAAACAAA
GGAGCGGTAACATTTCGACCACACATCGATAAATCATCATGGCAATGGCA
CCAATGTCATGAACATTACCATTCAATGGAAACATTCGCCATCTATGATT
TGATCGATAACAACGGTTACCGTATTGCGCATGGGCAGAAAGCCAGTTTT
TGTTTAGAAGATTCTGACTGCGAACCAGGATACAAGAAGAATTTCAATTG
TACTGATAAAGGTGACCAGGGTATTACTGTCAATTGTGCTGATAATTACA
GTAATCGAATTGATTGCCAATGGATAGATGTTACAAATGTACCCTTTGGA
AATTACTCCTTGAGAGTTGATGCTAACCCTTTAAGGAATGTTACCGAAAG
TGATTGGTTGAATAATAGAGCAGTCTGTGAAATCGGATATTTTAATCGCG
ATGATATTATTGTGAGAGGTTGCACGACAGATCCTTGTTATCAAGAATCG
TTTGGTGGAAATTCTTTTGGTCATTGTTGTCAATTTCCATTCGTGTACAA
TGGACAATTACATTATCAATGTATACAAAAGAACAATAGTTCTGAGAACA
ATGGAAACAATAGCGAATTAAACAATGAAAATAGATCTTGGTGTTCGACC
ACTAATGATTTCGATCAGGATGGAAAATGGGGATATTGTagtgaaaaaat
ctgaATGTTTGACGTTCGATGCAAGGGAAGTGAATCGGAATTATCGGAAT
GTTCTTATTCCGATTATTCCCGATGTCGTTATTATGATATGGCTAGCGTC
ATTTGTACACAATATGCACCAGACCTGGTCATGGACATTCGCTTATTCAA
ACAGAGCATCAAAGTGGACACACATCCTCTCCATCATTTACGTTGTTCCT
TCGAAGAAAGATGCCTTTCACCTGAGGTGGATAATATTTGGGGTAGAAGT
GGTTTCCATAACAGacacttgttaaaatttacatCAAGgTTCTTAAACAA
AGGAGCGGTAACATTTCGACCACACATCGATAAATCATCATGGCAATGGC
ACCAATGTCATGAACATTACCATTCAATGGAAACATTCGCCATCTATGAT
TTGATCGATAACAACGGTTACCGTATTGCGCATGGGCAGAAAGCCAGTTT
TTGTTTAGAAGATTCTGACTGCGAACCAGGATACAAGAAGAATTTCAATT
GTACTGATAAAGGTGACCAGGGTATTACTGTCAATTGTGCTGATAATTAC
AGTAATCGAATTGATTGCCAATGGATAGATGTTACAAATGTACCCTTTGG
AAATTACTCCTTGAGAGTTGATGCTAACCCTTTAAGGAATGTTACCGAAA
GTGATTGGTTGAATAATAGAGCAGTCTGTGAAATCGGATATTTTAATCGC
GATGATATTATTGTGAGAGGTTGCACGACAGATCCTTGTTATCAAGAATC
GTTTGGTGGAAATTCTTTTGGTCATTGTTGTCAATTTCCATTCGTGTACA
ATGGACAATTACATTATCAATGTATACAAAAGAACAATAGTTCTGAGAAC
AATGGAAACAATAGCGAATTAAACAATGAAAATAGATCTTGGTGTTCGAC
CACTAATGATTTCGATCAGGATGGAAAATGGGGATATTGTagtgaaaaaa
tctga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:236916..241136 + |
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