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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:210970..215507+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11447.1.p1 ID=MSTRG.11447.1.p1|Name=MSTRG.11447.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4538bp|location=Sequence derived from alignment at sc0000083_pilon:210970..215507+ (Clytia hemisphaerica_ch_hm2_pilon)
TGGAAACGAATTCATTCAATTCATCGTCTGGTTAACTACAGCAATAAGCA
TATCGAAAAAGATGGCATCAATGGCGAGTCGGAAAAACAAAGCAAAGAAG
ACTCCAACACAACCTGAAATGTATACGGGCATGATGAAGAgcttaaaaca
aaaaacaaaatcacaAGGTTCATCATCTACAGCAGATCCGCCGTCAACAa
attataatagaatttcaaatttgattcaaaaTATGTTATCTGAACGTACA
AAAGATTTTCGAACAGCAACAGTCGAATACCACACCATTCCCGTCACGGC
TGAAGATAGTCGAGCAAAATCGATTGCAGAACAAGCCACGTACAATGAAC
TTCATGCTAATATAGAAATGAAACTATTCGAGGTCGACGAGGACGCTCCG
GAAGTACCGGAACGGGAAGATGATTTTGAAGTTCCGTTGTCGGATTATTC
CCGCACCggttatttttttgagaaagccGGTATCGGGTTCGGACAAGAAG
AAACGTATCGCATTTTGTTAGGTTTGAAGTCTCTTGCCATGGAGTGCATG
TTTGTTCATGTGCGATTTTGGGGAAAAATGCTCGGTATCAAGTCTAACTA
TTATATTGCTGAAACAGAATTCAGAGAAggtaattaattttcttttgttt
tgaaagactttaatgtttttttgtagGAGCATCGAAAATTTATGTACTTA
GCTTTTTGAGTCTTTtttaaaagcctaaaaatgttcatgaAATCTTCAGT
TATCTCAAACTTCCTCTTTTTTGCAACAAATTATTTGGTCCCTTGCGATA
TTATGGATAATAAAACTCGAATAGAAAACCAGAGATGATTCTAAAATCCT
GTGCTATATCTCTTGCGATTAATATTTCCTTCAAGATTTTCTTCTACATT
GCCTAATATAGCAGAAAAACTTACATTATCATAAAGTCGGCTAGACTTTA
AagactttttcacaaagtcctagcgaattttatctcattttgagacTTCA
GCCTCCTCACTTTTATGTGTTACAGAACCGCTGTGACCCCAACCCCACtg
aaaaactttgcaaaaatttcgtccccgggaAAATActtaatttcagcccc
actgagaaatttactttgatttcatccccattggaaattcaatgtttaaa
aatggcactccaaaaccatctctactaaattttttaactttagaacAACA
TAATTTCTATCcacattgaaatttcaatagaaatttttaaccccactgtg
agacaggggtatctgTATTTATATTTTCTCTACCTGCATCCGATAGGTGA
GGGCGATGCTGTACAACCAGAAACTAGTGAAGTTTATTCTGAACAAGTAC
CACAACACTATACTCAAATAAACATTGAATCCGATATTGAGGAACCGGAA
GAAGATGAGGGATTACCAAAACCCGATTGGAAGGAACCGGAACCGGTGCA
AGCAGAAGAACATCATCATGGTGCTAACCGTTATGTTTATTTCGTTTGCA
GTAAATTAGGTATGTAGTTTAGATGTAGGCTTCTGCtaatcctctagcga
aaaaggtttttcataagtttctatataggaagtatatatctattcatgat
atgcaccattgcaacgTCTTCGTTGGACCCCACAGCTGtatggttgaaag
tgacgtaatgattgattttacgtcacttgcaaccaatccgctgttgggtc
cgtggaagacattgcaatggtgcatatcatgaatagcgtggatctataga
ggtctgcgattcagactagtttAGACGATGCTAGCATTCTTTAGGAACAA
GCGCAGGAAATATATATGTGCAGATATTACTTACAGCCAGCGCAGAGGTT
TACAGGAAAAAATGGCGGTAGAGTTTAGAGCACtctaaacacctccgcca
ctgcttactccactcCGGGCTAACCACCGTTTTCAAATATATCCTGCCTA
CTAAATCATTACTTTTTAGTGATCGATAAGGTAGTTTAGCATGTAGTTTA
CTCGTCCAGACCCAAATCATTTGTTTTGTAATAGTGAGATTGTAGCTTGC
TTTTGTCGTGAGTTAGGTATTTAAGTAATTAGGAgtatatttaattattt
ttcaccaGATCTACCATTCTTTACATTTTTAGATTCTATTAAGATGTTAC
ATTCTGcattgttattataaaaaacttgtCCCTAGCCCCCACCCCACAAA
TATTTCTACTTCTCTTCTAACAAAaacctttcttaaaaaaaaagaggtct
ATGTCTGCGAATGGAAACTACCCTGGGTATTCACACGCAATTATCAGTTT
AGTTTCTGTCAAATGGATAGACAAACATTCATCTCAGAATTTAGGTAAAA
CGAATTTGATGAAAGCTGGCTGATTCAAAAAGCCCAAACATCTCAAACTG
AAATTTTAGTATAGTCTTAACCGCAGACCTTTACAAGGCTACAAAACCAA
AGGCTGTATAGGGAGCTATTCTATAGGGTACTAAGGGACTATGAGGAGTA
CAAATCCGTTTGCAGATGTCATCAGCCTACTTTTAGTAGATTTCCTCCAT
TTATGAATGATTCTGTTGTAGTAATTAAGATTGAGAACATGATTTTAAAA
AAGTATCACGCTTTGAAGATAGAccttgaaaagagctttccaatgaACCC
AAACATGACCTTTTTGCTTTAGCCGAGAAATTTGCATTTGAAACTGACGC
ACCGTGGTTTTGAATAAAACCTTAAATTTTAGTTTCCCATAGTACTGAAA
GAGTTAAGATAAAACCGCTCaaactttattattattttttaacaacATAG
GTGAACCATGGGTTAAACTACCACACGTTACACCAACCGAGATTGCCCAA
TCACGTAAAATCACTAAATTACTGACCGGTAACCTAGAGCAACCAATTGA
AAGTTATCCAAAATTTgttggaaaagaagaaaattaccTGCGTGCATTAA
TAGCGCGTATCTCTGCTGGCACCCAAATCTCACCGAGCGGGTATTATGTA
TTTGATGACGAGGGAAACGAAGAGGAGGATTCAGAGGAAGTGCATGATTC
ATACGTTGTCAACATTGCATTTGATGGTATCCCTGTTCGccaattggaaa
aaaattatcgACAGAATTGGGTTCACCACGCCCAATATATTTTACCACAA
GGGCGGTGCTCGTGGTGGTCGCCCTCCAACTCATTCcgtgatgattttga
tgaagatgaggtatatttttttatattctttcttcAACTTGGGCataaac
aaaaattgcaaaattcatCTAATAATCTAAAGTCACAATCATTAATGTTT
TGTACTTTACGAAGCAGAAGTGAGCACAATTATTTAATAAATGATGACTT
TTGGGTGATTGGCATTGGCAATCTCGTACCAAGGGCCtttgcaccacttt
ttgatttactGATGAACGTGATATAACTttttagaatcataaaaaagtaa
GCTAAAGGGATTGGGCTCGACTTTAAGAGTAAAGAGACAAAAATGTCCTC
TAGCTTGATATGTTAATCAAAACAACCTGTTCCCAACGCACATGCAAGTG
AAAGAGaagtagaaaaagaaaaaacctttataGTCTGAATAGTaaaacac
cctcttctcacagacccggtagaattttttcagtcagtggggataaaaat
aacggacttaaactcgatggggatcgatattcccaATTTTTTATGGCCaa
gaatttcaataattttgttttccaaGTCAAATTCAGTAGGAtgggaaaaa
ttgtaaatattttgcagtgaggattggtttatttgattattttcagtggg
gacaaaaattggaggataattttccaccggggcgaTATtatggacaattt
ttccagtgggtgtGTCAGAAGGGGTTGTTCTTCGCGTGTCACATTGCAAG
GGTGCATATAATGAATTGCCTGAAACCTATCCGGTTCATTGTTTCCAATT
AGCTTTGATTCGTCTCCTTGACATAACATGATAACAATACATcattatat
tttaaaactttgacaGGAATTCGATGACGAAAATATGATCCCTCAGGAAA
CTGGCCCCGTCCTATTAACCAACCTAGCCGGCGATAAAAATGCCAGTGGC
AATCCAGCATGGTCCGCAACCCTTACGTCTGAATACATGCCACAACATGG
TATCTGTATTATGAAGTCCAACCAGTGGCCAGGTGCATATGCATATTCCA
ATGGTAAACAATTCGATAATGTATACATTGGTTGgggacaaaaatattca
gccGATGGCCACAATCAACCTTTCCCACCAGCCTCCATTGAAGAATATGT
GAAATGTGCAGACGTAATTGAAGAACAAGATCCATCACTTgaacaagaag
aagaagcaAAATTGATGGAAGAATTAGCCAATAATGCAGATACTATTGTT
AGAGCCAATGAGGCGCCAGATGATGAAGACGACGATTAAgtttaattgct
ttttttaagGATCTATTGTATACAagtttcttctgtttttcaaatatcaa
tattttttttaatgaataataaacaaaaaaatgacgAA Coding sequence (CDS) from alignment at sc0000083_pilon:210970..215507+ >MSTRG.11447.1.p1 ID=MSTRG.11447.1.p1|Name=MSTRG.11447.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6456bp|location=Sequence derived from alignment at sc0000083_pilon:210970..215507+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCAATGGCGAGTCGGAAAAACAAAGCAAAGAAGACTCCAACACA
ACCTGAAATGTATACGGGCATGATGAAGAgcttaaaacaaaaaacaaaat
cacaAGGTTCATCATCTACAGCAGATCCGCCGTCAACAaattataataga
atttcaaatttgattcaaaaTATGTTATCTGAACGTACAAAAGATTTTCG
AACAGCAACAGTCGAATACCACACCATTCCCGTCACGGCTGAAGATAGTC
GAGCAAAATCGATTGCAGAACAAGCCACGTACAATGAACTTCATGCTAAT
ATAGAAATGAAACTATTCGAGGTCGACGAGGACGCTCCGGAAGTACCGGA
ACGGGAAGATGATTTTGAAGTTCCGTTGTCGGATTATTCCCGCACCggtt
atttttttgagaaagccGGTATCGGGTTCGGACAAGAAGAAACGTATCGC
ATTTTGTTAGGTTTGAAGTCTCTTGCCATGGAGTGCATGTTTGTTCATGT
GCGATTTTGGGGAAAAATGCTCGGTATCAAGTCTAACTATTATATTGCTG
AAACAGAATTCAGAGAAgGTGAGGGCGATGCTGTACAACCAGAAACTAGT
GAAGTTTATTCTGAACAAGTACCACAACACTATACTCAAATAAACATTGA
ATCCGATATTGAGGAACCGGAAGAAGATGAGGGATTACCAAAACCCGATT
GGAAGGAACCGGAACCGGTGCAAGCAGAAGAACATCATCATGGTGCTAAC
CGTTATGTTTATTTCGTTTGCAGTAAATTAGGTGAACCATGGGTTAAACT
ACCACACGTTACACCAACCGAGATTGCCCAATCACGTAAAATCACTAAAT
TACTGACCGGTAACCTAGAGCAACCAATTGAAAGTTATCCAAAATTTgtt
ggaaaagaagaaaattaccTGCGTGCATTAATAGCGCGTATCTCTGCTGG
CACCCAAATCTCACCGAGCGGGTATTATGTATTTGATGACGAGGGAAACG
AAGAGGAGGATTCAGAGGAAGTGCATGATTCATACGTTGTCAACATTGCA
TTTGATGGTATCCCTGTTCGccaattggaaaaaaattatcgACAGAATTG
GGTTCACCACGCCCAATATATTTTACCACAAGGGCGGTGCTCGTGGTGGT
CGCCCTCCAACTCATTCcgtgatgattttgatgaagatgagGAATTCGAT
GACGAAAATATGATCCCTCAGGAAACTGGCCCCGTCCTATTAACCAACCT
AGCCGGCGATAAAAATGCCAGTGGCAATCCAGCATGGTCCGCAACCCTTA
CGTCTGAATACATGCCACAACATGGTATCTGTATTATGAAGTCCAACCAG
TGGCCAGGTGCATATGCATATTCCAATGGTAAACAATTCGATAATGTATA
CATTGGTTGgggacaaaaatattcagccGATGGCCACAATCAACCTTTCC
CACCAGCCTCCATTGAAGAATATGTGAAATGTGCAGACGTAATTGAAGAA
CAAGATCCATCACTTgaacaagaagaagaagcaAAATTGATGGAAGAATT
AGCCAATAATGCAGATACTATTGTTAGAGCCAATGAGGCGCCAGATGATG
AAGACGACGATTAAATGGCATCAATGGCGAGTCGGAAAAACAAAGCAAAG
AAGACTCCAACACAACCTGAAATGTATACGGGCATGATGAAGAgcttaaa
acaaaaaacaaaatcacaAGGTTCATCATCTACAGCAGATCCGCCGTCAA
CAaattataatagaatttcaaatttgattcaaaaTATGTTATCTGAACGT
ACAAAAGATTTTCGAACAGCAACAGTCGAATACCACACCATTCCCGTCAC
GGCTGAAGATAGTCGAGCAAAATCGATTGCAGAACAAGCCACGTACAATG
AACTTCATGCTAATATAGAAATGAAACTATTCGAGGTCGACGAGGACGCT
CCGGAAGTACCGGAACGGGAAGATGATTTTGAAGTTCCGTTGTCGGATTA
TTCCCGCACCggttatttttttgagaaagccGGTATCGGGTTCGGACAAG
AAGAAACGTATCGCATTTTGTTAGGTTTGAAGTCTCTTGCCATGGAGTGC
ATGTTTGTTCATGTGCGATTTTGGGGAAAAATGCTCGGTATCAAGTCTAA
CTATTATATTGCTGAAACAGAATTCAGAGAAgGTGAGGGCGATGCTGTAC
AACCAGAAACTAGTGAAGTTTATTCTGAACAAGTACCACAACACTATACT
CAAATAAACATTGAATCCGATATTGAGGAACCGGAAGAAGATGAGGGATT
ACCAAAACCCGATTGGAAGGAACCGGAACCGGTGCAAGCAGAAGAACATC
ATCATGGTGCTAACCGTTATGTTTATTTCGTTTGCAGTAAATTAGGTGAA
CCATGGGTTAAACTACCACACGTTACACCAACCGAGATTGCCCAATCACG
TAAAATCACTAAATTACTGACCGGTAACCTAGAGCAACCAATTGAAAGTT
ATCCAAAATTTgttggaaaagaagaaaattaccTGCGTGCATTAATAGCG
CGTATCTCTGCTGGCACCCAAATCTCACCGAGCGGGTATTATGTATTTGA
TGACGAGGGAAACGAAGAGGAGGATTCAGAGGAAGTGCATGATTCATACG
TTGTCAACATTGCATTTGATGGTATCCCTGTTCGccaattggaaaaaaat
tatcgACAGAATTGGGTTCACCACGCCCAATATATTTTACCACAAGGGCG
GTGCTCGTGGTGGTCGCCCTCCAACTCATTCcgtgatgattttgatgaag
atgagGAATTCGATGACGAAAATATGATCCCTCAGGAAACTGGCCCCGTC
CTATTAACCAACCTAGCCGGCGATAAAAATGCCAGTGGCAATCCAGCATG
GTCCGCAACCCTTACGTCTGAATACATGCCACAACATGGTATCTGTATTA
TGAAGTCCAACCAGTGGCCAGGTGCATATGCATATTCCAATGGTAAACAA
TTCGATAATGTATACATTGGTTGgggacaaaaatattcagccGATGGCCA
CAATCAACCTTTCCCACCAGCCTCCATTGAAGAATATGTGAAATGTGCAG
ACGTAATTGAAGAACAAGATCCATCACTTgaacaagaagaagaagcaAAA
TTGATGGAAGAATTAGCCAATAATGCAGATACTATTGTTAGAGCCAATGA
GGCGCCAGATGATGAAGACGACGATTAAATGGCATCAATGGCGAGTCGGA
AAAACAAAGCAAAGAAGACTCCAACACAACCTGAAATGTATACGGGCATG
ATGAAGAgcttaaaacaaaaaacaaaatcacaAGGTTCATCATCTACAGC
AGATCCGCCGTCAACAaattataatagaatttcaaatttgattcaaaaTA
TGTTATCTGAACGTACAAAAGATTTTCGAACAGCAACAGTCGAATACCAC
ACCATTCCCGTCACGGCTGAAGATAGTCGAGCAAAATCGATTGCAGAACA
AGCCACGTACAATGAACTTCATGCTAATATAGAAATGAAACTATTCGAGG
TCGACGAGGACGCTCCGGAAGTACCGGAACGGGAAGATGATTTTGAAGTT
CCGTTGTCGGATTATTCCCGCACCggttatttttttgagaaagccGGTAT
CGGGTTCGGACAAGAAGAAACGTATCGCATTTTGTTAGGTTTGAAGTCTC
TTGCCATGGAGTGCATGTTTGTTCATGTGCGATTTTGGGGAAAAATGCTC
GGTATCAAGTCTAACTATTATATTGCTGAAACAGAATTCAGAGAAgGTGA
GGGCGATGCTGTACAACCAGAAACTAGTGAAGTTTATTCTGAACAAGTAC
CACAACACTATACTCAAATAAACATTGAATCCGATATTGAGGAACCGGAA
GAAGATGAGGGATTACCAAAACCCGATTGGAAGGAACCGGAACCGGTGCA
AGCAGAAGAACATCATCATGGTGCTAACCGTTATGTTTATTTCGTTTGCA
GTAAATTAGGTGAACCATGGGTTAAACTACCACACGTTACACCAACCGAG
ATTGCCCAATCACGTAAAATCACTAAATTACTGACCGGTAACCTAGAGCA
ACCAATTGAAAGTTATCCAAAATTTgttggaaaagaagaaaattaccTGC
GTGCATTAATAGCGCGTATCTCTGCTGGCACCCAAATCTCACCGAGCGGG
TATTATGTATTTGATGACGAGGGAAACGAAGAGGAGGATTCAGAGGAAGT
GCATGATTCATACGTTGTCAACATTGCATTTGATGGTATCCCTGTTCGcc
aattggaaaaaaattatcgACAGAATTGGGTTCACCACGCCCAATATATT
TTACCACAAGGGCGGTGCTCGTGGTGGTCGCCCTCCAACTCATTCcgtga
tgattttgatgaagatgagGAATTCGATGACGAAAATATGATCCCTCAGG
AAACTGGCCCCGTCCTATTAACCAACCTAGCCGGCGATAAAAATGCCAGT
GGCAATCCAGCATGGTCCGCAACCCTTACGTCTGAATACATGCCACAACA
TGGTATCTGTATTATGAAGTCCAACCAGTGGCCAGGTGCATATGCATATT
CCAATGGTAAACAATTCGATAATGTATACATTGGTTGgggacaaaaatat
tcagccGATGGCCACAATCAACCTTTCCCACCAGCCTCCATTGAAGAATA
TGTGAAATGTGCAGACGTAATTGAAGAACAAGATCCATCACTTgaacaag
aagaagaagcaAAATTGATGGAAGAATTAGCCAATAATGCAGATACTATT
GTTAGAGCCAATGAGGCGCCAGATGATGAAGACGACGATTAAATGGCATC
AATGGCGAGTCGGAAAAACAAAGCAAAGAAGACTCCAACACAACCTGAAA
TGTATACGGGCATGATGAAGAgcttaaaacaaaaaacaaaatcacaAGGT
TCATCATCTACAGCAGATCCGCCGTCAACAaattataatagaatttcaaa
tttgattcaaaaTATGTTATCTGAACGTACAAAAGATTTTCGAACAGCAA
CAGTCGAATACCACACCATTCCCGTCACGGCTGAAGATAGTCGAGCAAAA
TCGATTGCAGAACAAGCCACGTACAATGAACTTCATGCTAATATAGAAAT
GAAACTATTCGAGGTCGACGAGGACGCTCCGGAAGTACCGGAACGGGAAG
ATGATTTTGAAGTTCCGTTGTCGGATTATTCCCGCACCggttattttttt
gagaaagccGGTATCGGGTTCGGACAAGAAGAAACGTATCGCATTTTGTT
AGGTTTGAAGTCTCTTGCCATGGAGTGCATGTTTGTTCATGTGCGATTTT
GGGGAAAAATGCTCGGTATCAAGTCTAACTATTATATTGCTGAAACAGAA
TTCAGAGAAgGTGAGGGCGATGCTGTACAACCAGAAACTAGTGAAGTTTA
TTCTGAACAAGTACCACAACACTATACTCAAATAAACATTGAATCCGATA
TTGAGGAACCGGAAGAAGATGAGGGATTACCAAAACCCGATTGGAAGGAA
CCGGAACCGGTGCAAGCAGAAGAACATCATCATGGTGCTAACCGTTATGT
TTATTTCGTTTGCAGTAAATTAGGTGAACCATGGGTTAAACTACCACACG
TTACACCAACCGAGATTGCCCAATCACGTAAAATCACTAAATTACTGACC
GGTAACCTAGAGCAACCAATTGAAAGTTATCCAAAATTTgttggaaaaga
agaaaattaccTGCGTGCATTAATAGCGCGTATCTCTGCTGGCACCCAAA
TCTCACCGAGCGGGTATTATGTATTTGATGACGAGGGAAACGAAGAGGAG
GATTCAGAGGAAGTGCATGATTCATACGTTGTCAACATTGCATTTGATGG
TATCCCTGTTCGccaattggaaaaaaattatcgACAGAATTGGGTTCACC
ACGCCCAATATATTTTACCACAAGGGCGGTGCTCGTGGTGGTCGCCCTCC
AACTCATTCcgtgatgattttgatgaagatgagGAATTCGATGACGAAAA
TATGATCCCTCAGGAAACTGGCCCCGTCCTATTAACCAACCTAGCCGGCG
ATAAAAATGCCAGTGGCAATCCAGCATGGTCCGCAACCCTTACGTCTGAA
TACATGCCACAACATGGTATCTGTATTATGAAGTCCAACCAGTGGCCAGG
TGCATATGCATATTCCAATGGTAAACAATTCGATAATGTATACATTGGTT
GgggacaaaaatattcagccGATGGCCACAATCAACCTTTCCCACCAGCC
TCCATTGAAGAATATGTGAAATGTGCAGACGTAATTGAAGAACAAGATCC
ATCACTTgaacaagaagaagaagcaAAATTGATGGAAGAATTAGCCAATA
ATGCAGATACTATTGTTAGAGCCAATGAGGCGCCAGATGATGAAGACGAC
GATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:210970..215507 + |
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