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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:1395790..1402393- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11431.1.p1 ID=MSTRG.11431.1.p1|Name=MSTRG.11431.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6604bp|location=Sequence derived from alignment at sc0000082_pilon:1395790..1402393- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTTTATCGGTGGCGATATTTCAGCCAATTTTTCCAGTGGGAAGGGGT
CCCAGTGAGTCTGTGAGAAGGGGGTGTTTTTTCTTTCAAGACTTGTTTCA
GTTTCTAGATTAGACTTGACAAAAATTACGGATCAAAAATGATGTTGGAT
CAACATTGAATGTAGACTAGATAAATTTCGGTTTTTTGAAGTTCGTGTAT
ACAGTGGCGAAACACGTTGAAAAGATAGTACTGAAATTCACAGTAAAGTT
TTCCAAAAGTCCCATTTAGAAAACGTCCATACAAAGTCCGTCTATCGTCT
ATACCTCTATACATATTTGAATGTTGGAAAAACGTTAGCCGACCCCTGGA
TGAACGCAGCGGGAACACAACGTCATAAAAACGTCCGGATAATAACGTTG
TATGAACGCTAGAACAATTTGTTGGAAAAACGCTTGAGTCCTAGAGCGCC
CCGGTGGACACAAACGTCATTACAGCAACTAACCGTTTTATGAACGTTGA
AAAAACGTTTTTTTGTATGTCAAGATGACCAAAACGACAGTCCACATGCT
AACAGAAGATGTCGAATTGAAACCTGGAAATGGAAAACCGGACCGGAAGA
ATGTCTTTTTCTTAACTATTCTGGCGGTTGCTTTGCTTTTGGTGTTTTTG
TTCATCGGTTTGTATATTAGCAGTAATAACAAGATTGATGATCTTGAATT
GAAAAATGAAGAGCTTCTGAAAAGTAAGTTTTTGTTTCGATTTTGTGTTT
GTTTGCTTTTGAGGCAGCTTTGTTCCTAGGCTGCACGCATCCCCTAAAAT
AGTTTTTGATATATCAAAAGTAATCAGGGGAGATATACAGGCAGTCTACT
TTGTTCCCTGCCTATATTCAGTTTTTTGACGTTTTCTGATAGTACCTGAT
TTTCTCTGGCGTCCATCAATAACGTAATACACGGGTTTCGAATTAAATCT
GGCGCGAGAGAAAAAATCAAGTAAATAAAAGGAGCGATAAGGGGAAATGC
CTTATAAAAGGTTGATAGATTTCCTTTCTTCTCTTTTGAAAGCCAGGTGT
TCATTCAAAAGATGTTTTTCTATTTTAAATTCAATAAAAGAAATATGATT
AAACGATTGACTTTTTATTTTAATGTTTTTTGTTTTCATAATGACCCATA
AAGTCTGTCAAAATGGAAAAATGAGCTAAAATTGCTTGATACACGGCCAA
TTTTCGTTCTGTTTACTTGATATTCTTCGTGCAAATTTACATGGGATCAA
AGCTAAAGCCATCAATAACGTAATTAAAACGGCTAGTTCGAAACGCAGGT
CACAGGTCAACAGGTCACAGGTCACAGGTCACAGGTCAACAAAGTGCAGA
CCGGAAAAAAGATAATAAGATCATAACATATACATAACATAACATCAATA
CATAACGCATTAAATTACAAAAAAGTAATACATGTTATTTAGATATTATA
AAATGACAATTGAATAAAATAACAACCTAGTGACACTTACTTACAAAAAT
AATGACAAAATCATAAAATATGATGCCTAACAAGACAAAAGCACGAAAAA
TATTTATTATACAAAATGTGATGTGGATGGTGTGAATGGATAAAAAATGG
CACCAAACAGAAGCTTGCAAGGTCCCTAAGAGAGTGGTTTTAGAAGGATG
GAACTAATTAATTATTCAGTTATTATTTTAATGACTTAATGACAACTTTT
GACAAAAATGTTGACAGAATCACAAAATATCATGTTTTACAAGAGAAAAA
CACCAAAAATATTTAGCATACCGAATGTGATGATAACAATATGGCTGGAT
ATAAAATTACACCAATCAGAAGCTCGTGAATTCTCTGAGAAAGTAGTTTT
AGAGCGATGAGTTTTATTATATGTAACCATCATATAACATTACAAACATT
ACAATATGTAATATACCTGTTATACGTATAATATGGTTTTAAATCTTCTG
GTCTGCATTATACACGGCGCAAACTGCGAAAGATCCATAAAAGCACATGG
TTAAATTTTGATGTTTGAAATGGTTTTATATGGATGAAATTGCTTGAGAA
TTATGTTTTTGATAATTCTTTGTGTTTTCCAAACATTTTCCTCTGCATTG
ATTAGAGTTAACCTGTCATCACTGACCTGTGACCTGTGACCTGTTGACCT
GTGACCTGTGACCTGCGTTTCGAACTAGCCGTAATTAAAACCCTGGGATA
CACGGGGACGGGGAAGCTGCTTTGGAAGTAAAACTAGATGGCACGTGTCG
TAAGCCCAAAATATAAATTTTCATCCGACACCCTAAAGCTCCGAAGGTCG
GGAAAATTTTCAACGTTTGGAAGGTTTAGATGACGGAATTTCGTTGTACT
TTCACAAAATAAAAGGTTTAAAAGTATTACAAACACACTTCAAAGATTTA
TCTTGTCTAAGTCTAATTCGTGATATGCACCACTGCAATGTCTTCTGACA
TTACATCACGGACCCAATAGTTGATTGGTTCTAAGTGACGTAAAATCAGT
AATACGTCACTTTCAACCAATCAGCTGTTGGCTCCGTGGAAGACATTGCA
ATGGTGCATATCACGAATATTGGACCTACCCCGGTGGAGGTCCTATAAAT
TAACCTTTGTCCGTTCGTTCGTCTGTTCGTTCGTTATTAGCTTTCCTCAT
GATTGGCTCGTTAGTTTTTTCTGATTTTTTGCACAAAGATGCATAACTAT
AAACCCTCGAATGTAACGGAGCCCGATTTTCAAAAAAAAAAATTTGGGGG
CAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGA
AAAATTAGGTCGTTAATTTTTTCTGATTTTTCGCATGAAAGTAGGGTACC
ATCGTAGGTAAAAGATGGCTTAAGCGAATTTTTGCAAAAAAAATTTTTTG
GCTCAAAAAACGCATGTTTATCTATAAGAATCACTATTAATAAGCATACA
TCAATGTTCTTAGTCAAATTACTCAATTTTTTTTATGAGATAGATGTTTT
TTTTGCTCATGAGGGCTTACTTTTAAAGAATATATGTGTTTAGACATGAA
ATTTTGGTTGTTTGGCTTGTTTTTATAGAAAAACTGGCCAAATTCGATAT
TTTTTATAAGCACACTATCAATTACTTAGGTATTAGCGTTTCTCGAGATT
GGCTCTTTCATTCTTTATGACTTTTTGCACAAAGATGCATAACTATAAAC
CCTCGAATGTGACGGAGCTAGATTTTTGGAAAAAAAATTTCGGGGTAAAA
TTCAGCTAAAAAACGGATAAAAAAAGGGTTGTTATTTTCTGACTTTTTGC
ATGAAAGTAGGTAAAAGATGGCTCAAGCAGATTTTCGTAAAAAAAGAATT
TTTCAGCTCAAAAAATGCATATTTATCTATAAGAATCACTGTAAGCATAC
ATCAATGTTCTTAAAATTACTCAATTTTTTTATGAGATAGATGTTTTTTT
GCACTCGAAGTCTTGAATATGAAAGAATTCTTCAAGAGTATGAAATTTTG
GTTTCTAAACGTGTTTTTTTATAAGAAACAAACGACTAATTTTAATAGAT
CGTCACTATTTGTGTTCTGAATGATTGTTTAATGGTCACGCTTATGTAGA
TATCAATTATATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTA
TCACTTGCTTCTTTTGAAATATGGACCGATTCGGCAAAATCCAGTTACAC
ACTATCTTCAGGCAACCCTCAAGCAACGCAACAAAAACAAACAAAAAGCT
ATGCGCAGGTCTAAACGGGAAATATTAGAATACTTTGAGCTATCAAGCTG
TTACTAGATCACCCTGTACATATTCTTTCTACCAGTCCTTAGGTATAAAT
GGCTGATCGTGGGTGAAAATGACGTCACATGGAATCAGTCTATTTATGTA
TTCCAATTGTAAATAAAATAAACCAATTCATTCTTCTTCTTTGTCTTTTC
AGGATTGAAGAAAGGCGGTTCAAATAAAACTACCATGGCTCCAACGACTG
TCCCAACAACACCAGGAACAGAAGTTTATCATAATATTCGTTTACCAGAA
TACATTAGACCCATACATTATGAAATAGGTGCGTATTGCAAAATTTCTCT
CATTTTTAATATATGAAGCTTTCATAAATGTTCAAAAAATTAACTTTCCA
AAGATGTATTTTTCTTATATATTTTTCAGACATTTTAGTTGGTAATTTCT
AATCGTTGAATCCAATTTTTCAACGTTTTTACACAATGAAAGTCTAATAT
TTAATATAAAGGGGAATTCCCTACAAAATTTTAAATACCATAAGTGTAAT
CCTTGTTGACAAAATGAAAACTCAAACGAATCCAAATTTGATATTCTGGT
GTAACCACCCAGTTTGAGTTGAAACTTCAACCTTTCTCAAGCAAAAAAAA
AGTGAAGCCTTAAGATTTGCCCTGCATTTAGAAATTTTGTGCAAAAACCA
CACGGGTCAAGTGTGTTGGATGGGAAATAAGTGGCTTCAATTGCAATACA
GAAGTTTCGTACCAAGCCCCTTCGGGCCTTTGTCATTGGCACGACGTTAG
TAACTCTTTGAAAAACTTTGATTCAATTTGCCTTTGACTTGGGTTAGGGT
TAAACACCATTAAAATGTATCCAAACCAAGCCAAAATCTAGCATTAAAAA
CATAGTTCAAGCAAAATTTGGCAATTTAGTGGAAATGCTCTAAAAATGGC
ATTCTTAGGTTCAGTTGCCAAATTCTATGATGATGGAATTCTTACATTTT
CTTATTTTTTAGCCAATTTCATCATAAGTATATTCTTATAAAAATGCTTG
TATACTAGTAAGCGTTTCAGAGTTTTCCATGGAATTCGACTGAAACTTTT
TTAAAGTAGTTTCAACGAAGACATTTATGATTAATATTCGTACGTTTTGT
TTTATAGATAAGAACAAACCAGTGCCGTAGGCATACCGATTGCATTTTCT
TATTGGGGGGGGGGGTGAAGTTTAGTGAACCATGGTTTGGCCCCAGGGGG
GAAATTTTGAAAATTTAAGCTCTAGATTGTTTGAAAATGCACTCAAAACA
AAATGCTTTCAAGAAAAAACAAGAAAAACTTTGCATTTTGCAAAATAACC
ATTTTTGAAAAAAATATTGGGGGGGGGCCAGCTGCTACGACACTGCAAAC
TTTATAAGAACATAAGGCTACGCGAACTTTAAAACGGTCTCAGGAAAATA
TATAAAAATGGTCACAAAATGGTGAAATTAAGAACATTTTAAGAACATTT
TTAGGCTTCAAAAACTTGTATTGTTTTCTCTGTCTTTAGATTTGGAGATC
AATATGGAAAAAGATATTGTTGATGGTACAACAAAAATCAAGACCGAAGT
TTCCAAACGGTCAAAATATATCATGGTTCATGCTATGAAATTCAATAACA
TTGAAGTCGTTGTTAAAAGTTTTGATTCTCAAGAAACATACCCTTTGGAG
CGAAAGCACGGAAGCAACGGGGGCTTCTTATATAAACCAAATCTCTATTT
TGTTATCGAAGCACAAGATTTTTTTGAAGTTGGAATTTATTCTTTGGAAT
TCAAATTCGATTATAATTTGCGAAAAGATTTGGCTGGTTTCTACTCGTCA
ACTTATGAAAATGAGAAAGGGAAAACCAGGTAAGTCCACATTGGCCATTG
AGTTTTAAAGCCTCGAAGCCGCCTCGAAGGGGCTAGACCCGAAACTTCTA
GATAGGAAACGAAGCCACTTGTCCCCATCTGAAAAACCTGACCCACGTGG
CTTTCACACAATCGCCAGATTTTGAATTGTTTCGTGTTCTCCCAAGTTCT
TGGTGTTTTAGTTTTTACAATTAAAAAATCTTTTTGCTAAATTAATTACA
ACCTTTGCTCATGTAAATATCCGCTATCAGTGCCAAATTAAAGAGGACAC
CATTTATCGTAGCTCCTACCATGTGTTTACTCTTACATCATAAAAAAGAA
TATTTCTAGATTCCTGCAAAAGTAAAATCCTCCAAGTATTAAGATATTTA
AAGTGACATCAAAATATCAAATTATTTACCTAGGGTAAGAACATTCGATA
AATTAGCAATGTCGAATAAACATTGACGTCTAGTATAAGCTACTTACTTC
CTTTAAAGATATGTTCTATTTTCCCTTCATAGAAAAGTAGCCGCCACCCA
ATTCGCGCCCGTGGACGCCCGTTCAGCATTCCCATGTTTGATGAACCAGA
AGCAAATTTCATGTGTTTTTTTTTTCTGAAATTTTATCATACTCCTTCAA
TTGATAGAGCACTATTGTAGCAACACTTAACCTTCAACTTATAGTCTTCA
CTGAGAAATTTATTTCTTTACAGGAAAGTTGCTGCCACCCAATTTGCACC
CGTGGACGCCCGTTCAGCCTTCCCATGTTTTGACGAACCAGCTATGAAAG
CGACTTTCGATATCTCAATGAAACGAGATAAAAGTTATCTTGCATTGAGT
AACATGCCGGTCATCAGAACTGAAGCTGATGGAGACGAATTGACCAATTA
TTTTAAAACAACTCCCATCGTGTCCACTTACTTGATCGTGTTTGTAATTT
GTGATTTCGAAAGTAAAATGGTTGTTGCAAATACTACGGTTCCTACTAAC
GTAA Coding sequence (CDS) from alignment at sc0000082_pilon:1395790..1402393- >MSTRG.11431.1.p1 ID=MSTRG.11431.1.p1|Name=MSTRG.11431.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3780bp|location=Sequence derived from alignment at sc0000082_pilon:1395790..1402393- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAGTTGCTGCCACCCAATTTGCACCCGTGGACGCCCGTTCAGCCTTCC
CATGTTTTGACGAACCAGCTATGAAAGCGACTTTCGATATCTCAATGAAA
CGAGATAAAAGTTATCTTGCATTGAGTAACATGCCGGTCATCAGAACTGA
AGCTGATGGAGACGAATTGACCAATTATTTTAAAACAACTCCCATCGTGT
CCACTTACTTGATCGTGTTTGTAATTTGTGATTTCGAAAGTAAAATGGTT
GTTGCAAATACTACGGTTCCTACTAACGTAATTTGGAGATCAATATGGAA
AAAGATATTGTTGATGGTACAACAAAAATCAAGACCGAAGTTTCCAAACG
GTCAAAATATATCATGGTTCATGCTATGAAATTCAATAACATTGAAGTCG
TTGTTAAAAGTTTTGATTCTCAAGAAACATACCCTTTGGAGCGAAAGCAC
GGAAGCAACGGGGGCTTCTTATATAAACCAAATCTCTATTTTGTTATCGA
AGCACAAGATTTTTTTGAAGTTGGAATTTATTCTTTGGAATTCAAATTCG
ATTATAATTTGCGAAAAGATTTGGCTGGTTTCTACTCGTCAACTTATGAA
AATGAGAAAGGGAAAACCAGGATTGAAGAAAGGCGGTTCAAATAAAACTA
CCATGGCTCCAACGACTGTCCCAACAACACCAGGAACAGAAGTTTATCAT
AATATTCGTTTACCAGAATACATTAGACCCATACATTATGAAATAGATGA
CCAAAACGACAGTCCACATGCTAACAGAAGATGTCGAATTGAAACCTGGA
AATGGAAAACCGGACCGGAAGAATGTCTTTTTCTTAACTATTCTGGCGGT
TGCTTTGCTTTTGGTGTTTTTGTTCATCGGTTTGTATATTAGCAGTAATA
ACAAGATTGATGATCTTGAATTGAAAAATGAAGAGCTTCTGAAAAGAAAG
TTGCTGCCACCCAATTTGCACCCGTGGACGCCCGTTCAGCCTTCCCATGT
TTTGACGAACCAGCTATGAAAGCGACTTTCGATATCTCAATGAAACGAGA
TAAAAGTTATCTTGCATTGAGTAACATGCCGGTCATCAGAACTGAAGCTG
ATGGAGACGAATTGACCAATTATTTTAAAACAACTCCCATCGTGTCCACT
TACTTGATCGTGTTTGTAATTTGTGATTTCGAAAGTAAAATGGTTGTTGC
AAATACTACGGTTCCTACTAACGTAATTTGGAGATCAATATGGAAAAAGA
TATTGTTGATGGTACAACAAAAATCAAGACCGAAGTTTCCAAACGGTCAA
AATATATCATGGTTCATGCTATGAAATTCAATAACATTGAAGTCGTTGTT
AAAAGTTTTGATTCTCAAGAAACATACCCTTTGGAGCGAAAGCACGGAAG
CAACGGGGGCTTCTTATATAAACCAAATCTCTATTTTGTTATCGAAGCAC
AAGATTTTTTTGAAGTTGGAATTTATTCTTTGGAATTCAAATTCGATTAT
AATTTGCGAAAAGATTTGGCTGGTTTCTACTCGTCAACTTATGAAAATGA
GAAAGGGAAAACCAGGATTGAAGAAAGGCGGTTCAAATAAAACTACCATG
GCTCCAACGACTGTCCCAACAACACCAGGAACAGAAGTTTATCATAATAT
TCGTTTACCAGAATACATTAGACCCATACATTATGAAATAGATGACCAAA
ACGACAGTCCACATGCTAACAGAAGATGTCGAATTGAAACCTGGAAATGG
AAAACCGGACCGGAAGAATGTCTTTTTCTTAACTATTCTGGCGGTTGCTT
TGCTTTTGGTGTTTTTGTTCATCGGTTTGTATATTAGCAGTAATAACAAG
ATTGATGATCTTGAATTGAAAAATGAAGAGCTTCTGAAAAGAAAGTTGCT
GCCACCCAATTTGCACCCGTGGACGCCCGTTCAGCCTTCCCATGTTTTGA
CGAACCAGCTATGAAAGCGACTTTCGATATCTCAATGAAACGAGATAAAA
GTTATCTTGCATTGAGTAACATGCCGGTCATCAGAACTGAAGCTGATGGA
GACGAATTGACCAATTATTTTAAAACAACTCCCATCGTGTCCACTTACTT
GATCGTGTTTGTAATTTGTGATTTCGAAAGTAAAATGGTTGTTGCAAATA
CTACGGTTCCTACTAACGTAATTTGGAGATCAATATGGAAAAAGATATTG
TTGATGGTACAACAAAAATCAAGACCGAAGTTTCCAAACGGTCAAAATAT
ATCATGGTTCATGCTATGAAATTCAATAACATTGAAGTCGTTGTTAAAAG
TTTTGATTCTCAAGAAACATACCCTTTGGAGCGAAAGCACGGAAGCAACG
GGGGCTTCTTATATAAACCAAATCTCTATTTTGTTATCGAAGCACAAGAT
TTTTTTGAAGTTGGAATTTATTCTTTGGAATTCAAATTCGATTATAATTT
GCGAAAAGATTTGGCTGGTTTCTACTCGTCAACTTATGAAAATGAGAAAG
GGAAAACCAGGATTGAAGAAAGGCGGTTCAAATAAAACTACCATGGCTCC
AACGACTGTCCCAACAACACCAGGAACAGAAGTTTATCATAATATTCGTT
TACCAGAATACATTAGACCCATACATTATGAAATAGATGACCAAAACGAC
AGTCCACATGCTAACAGAAGATGTCGAATTGAAACCTGGAAATGGAAAAC
CGGACCGGAAGAATGTCTTTTTCTTAACTATTCTGGCGGTTGCTTTGCTT
TTGGTGTTTTTGTTCATCGGTTTGTATATTAGCAGTAATAACAAGATTGA
TGATCTTGAATTGAAAAATGAAGAGCTTCTGAAAAGAAAGTTGCTGCCAC
CCAATTTGCACCCGTGGACGCCCGTTCAGCCTTCCCATGTTTTGACGAAC
CAGCTATGAAAGCGACTTTCGATATCTCAATGAAACGAGATAAAAGTTAT
CTTGCATTGAGTAACATGCCGGTCATCAGAACTGAAGCTGATGGAGACGA
ATTGACCAATTATTTTAAAACAACTCCCATCGTGTCCACTTACTTGATCG
TGTTTGTAATTTGTGATTTCGAAAGTAAAATGGTTGTTGCAAATACTACG
GTTCCTACTAACGTAATTTGGAGATCAATATGGAAAAAGATATTGTTGAT
GGTACAACAAAAATCAAGACCGAAGTTTCCAAACGGTCAAAATATATCAT
GGTTCATGCTATGAAATTCAATAACATTGAAGTCGTTGTTAAAAGTTTTG
ATTCTCAAGAAACATACCCTTTGGAGCGAAAGCACGGAAGCAACGGGGGC
TTCTTATATAAACCAAATCTCTATTTTGTTATCGAAGCACAAGATTTTTT
TGAAGTTGGAATTTATTCTTTGGAATTCAAATTCGATTATAATTTGCGAA
AAGATTTGGCTGGTTTCTACTCGTCAACTTATGAAAATGAGAAAGGGAAA
ACCAGGATTGAAGAAAGGCGGTTCAAATAAAACTACCATGGCTCCAACGA
CTGTCCCAACAACACCAGGAACAGAAGTTTATCATAATATTCGTTTACCA
GAATACATTAGACCCATACATTATGAAATAGATGACCAAAACGACAGTCC
ACATGCTAACAGAAGATGTCGAATTGAAACCTGGAAATGGAAAACCGGAC
CGGAAGAATGTCTTTTTCTTAACTATTCTGGCGGTTGCTTTGCTTTTGGT
GTTTTTGTTCATCGGTTTGTATATTAGCAGTAATAACAAGATTGATGATC
TTGAATTGAAAAATGAAGAGCTTCTGAAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000082_pilon | genome | sc0000082_pilon:1395790..1402393 - |
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