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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:1006368..1010180+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11402.3.p1 ID=MSTRG.11402.3.p1|Name=MSTRG.11402.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3813bp|location=Sequence derived from alignment at sc0000082_pilon:1006368..1010180+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCTCTAACCGCAAACACAAGCAAGCACAACAATGATGAATTCAATATCG
CAAGAACTTTCTCAGAAGAAACGTGGAGTAGGAGCCATAAACCGACTAAA
TGGTAAGTCTTGTGTTATTTTTACAAAGTCCACTGGTTACTGGATTGGAG
AGATATGGTTGGAGGTTTTTTGTCAGCTTGTCTTTTTTGCACGTGTGCAC
CACTGTAATTATAGACAGATTCTTGATGACatcatttgtttacattttgt
ttcaaattgCCTGCTCagattacacatttttttctttattagcagCTCTA
ATTTTGGCTATTGTTTGCATTGGTTAGGCAGGCCCATATCAGcatattga
ttgttgttgttTGGTTCGTGTCAAATCCCAATGTTAAGGGCCCATTCACA
ACTTTAAAATGTCCATTCACAGAATTGTTTTACTTTCTAACAAAGTTAAA
CATAAGAGAAAAGTTTTCACcgagaaaaagaaatcattcaccgtccattt
tatttttaaaatgccGTATTATGTTAATTTTGAGAAACTCGCCGTATACG
TTTGGTATCCCTAACTGAATAAACTAGGCCAATTTGATGGTAAAATCCAG
GCGTAATCTACCGAACAAAATCAAATTCTATTTTTAATCGAATTTATCTT
ATCGAAACTAATCGAAATTAATACTTCGATTAGGCTTCGATTAATCGAAA
CTATCGAGCtgtaatcgaattaatcgaattttCCAAGGTTTTTCTCAATT
AGTTTGATTACCTTTGATTAATTCGATAATGTTCGATAACTTGGATAAAT
GTTTGATAAGTTTCGATTTAGATTCGATAAGCTTTGATAAGTCTTCAATA
CCTTCGATTAATGACAAGAATAATTCTATTGCATATTCCAGAAAATAGAT
TTTGAAAACCAAGAAAGaattacaattttgaaaattttctaagaaTTACA
ATATTGAAAAAGAGATAGATTTTGAGTGAGATTTTTTCGTTCAATTGACA
TAGTCTGGCCATAAGTCCAAAGGACAAGAGTGCAAATTACAGTTTTATGA
CATAGTAATTATCTTTATATACTATGAATAGATAATTgctttgtcataaa
aatctactcTCCTACAACAAAGTTTGCACCCCTCTTGTCTTAGAATTTGG
AATTGAAGATGACTCTAATTATAGCCGCTAATTACTGAAGACCCTTGACT
GTAAAATAATCTTTGTAGATTGCGCAATGCGTTAATAAATTTTGCATTCT
GATATGAAATTTGGCCTGGAGAGTTAGTTCActaaaaattcaatgtttaa
taATTTGTAATTCTTTTCTGCTTTTAGAACCGCCCAATCAAAAAAGGTAT
ACAAATTCGTATACTATCGACGCTTTTAATCAGAATCCACCCATCAGCCC
CCTTCCGCCCAAACTACCAGACACGTTGGGTGAACTGCTAGCAGAATACA
ATCTTCAAATGTATTTACCGAAGCTGGAAGGTGAAGCGTTGGATGTAGCA
ACGTTTTTGGAGTTGTGCGATAACGATTTGAAAGAATTGGGCATTGAGTA
AGTTGTAATATTTTCTCGTTTGATTTTTGAAGCAACTTCAGCCTTGTATG
GTCTACGCTCGTTAATTGGATGCcccgttttcaaaaaaattcgaatgcCC
CGTAAGATTTGTGGTCCCTTGAGGAGAAATAAGCTCCTTGACCCAAACCC
TGAAGGGTTTAGAGAGTGTTACGGTACAATGTACTCAAAAACTTTACGAA
CAATTTGATACTGGCTACTTGGTTCGTATGAATCGCTCTTTTCTTGTCAA
TGAAAGTTTATGAGcagaagaagtaaaaaaaaatactgaaaTCAAATGAG
ATTTTGCAGCTATGGTTATCACAATCACAATCACTTCTTCTTATCACCAG
CATGTTCTAATATTTCTTGTGTCAAAGTTTGAGACATTCgcagaatattt
ttgtttacctTTACAACCAtttttttGTTCTTAGTAAATTTGGACCACGT
AAAAAGATGTTGTTAGCAATACGAGAATGCAAAGAGCGAAAGGCTGCTCA
TGACCCTAATGTAAGTCTATATGCATAATTCagtttacaaattttgtttt
taccaaaatgcTGTGCTACATAAAATTTAATAAccaaatcttcattttct
gtGAACATAAGACTTATCTTAACCCTTTGAACACGCTTGAAAATGGTGaa
agattttcatgattttttttttgaaacataaacataGATTCTACCCCCTA
TCCTTAGGGGGTCtgagactttcaaaaatttttgtaaggggggtcttttt
tctttcaatttcctaAGGGCGTTATGGGagtttttttaggaaatttgCGC
CGTACCAGTAAATTCGTTGTAGTTTTCCCGGGGGACAGGTCGTAACCAAA
TGGGTTGGCGGGAATTGACCTTCCTTAAGACTCATACATTGGGgaaattt
tttgcagaaagttGTGAGACAAGGCTTCTGAAAAGGACATCCCCTTCTGG
AGCTTTAGTCCGTACAGTCAAGCTACTGAATCACCACGgcaaattttatt
actttttgaagTACCACCGCAGTTATAATtttaatattcctttcttttta
gaaaaattgcaaagcaTTGATGGAGACATCAGAAGAGCTCCAGGAACACC
TAATCGGCTGTCATGCGAAGCCAATTTTTGTGTGTTCCTGGAGCGAGTGT
AAAAGTACTTTCGAAACGAAAGCTAAGTTTCTGGTGCACCTGAAACGCCA
CTCTGGTTAGTTGcagtttcaaaataaatctttttcctCCAATTTTGTAT
CAAGGGTATTTTGATATTTGCCCCTCTATTCGACCTTTTCACAATGGGTT
GTTCCAGGTTGTTCCTGGAAAATATTAGGATGCTGGTATCCTCTAAGAAT
CATGCTTCCTATACTTGAGCTTTCTTAGATGAAAAATTTACGCCTGCGAC
GCTGAAAtcacaagaaaaattttatccttcaaaaaaggtcgaattttttc
caatcttgcccccccccctaaacgAAAATTCGTGACTACGCCTCTGGGTT
TTATtgaggtctgcgaatcagactagtTTAAATTGTCCATATTCTTAAAA
ACGCTAATCTCAAAATTGAAAAGGAACTCCAGGGGCTCAAACCGGGCAAG
CAGGGTATATTGAAAATAGCCAAGTTGATGAAGTTGAAGACGTTTATGTT
TGAGATTACTATTTTTAAAAGTCCCCTTGTCTTcaaagaaattatgaaat
tctTTTAAGATGAAGGAGATAAGAAATGATATTCGGGATAATTTTGGAGA
CTAATTTCGTGTTTTATAGATGAATTTACAGttacatttctttttctttt
aggtgttgaaaaaggaaaatggaGATGCAAATTTGCTGGGTGCGGGAAAG
AATATGCGAATTCAAGCAATCGGTCGAAACATCATCGAGTgcacaataaa
agaaaatcatataAGTGCGATGTCTGTGATCTATCGTACGATTACGCAAA
TTCGTTAAATAAACACAAGAAGCGCGCccattaaatatttaaaaaaatca
caagaaaaatcagaaaaatcagaaaatttaactattaaTTTaaatcaaaa
aaaaattccccatTTATCGGGGAAagcttcgtcggggaaaatatttgtca
cttactaaaattttagtcatttttccccgacgaaaattttctctggggta
tttttcaaacaagaatttttttccatCTATATCGACATATTTAATGCCGT
TTCTTGTGTCTGCATAATGAACTTGGCTTGGTGTGTACGATTTATCAACA
TTAcacttatgat Coding sequence (CDS) from alignment at sc0000082_pilon:1006368..1010180+ >MSTRG.11402.3.p1 ID=MSTRG.11402.3.p1|Name=MSTRG.11402.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3030bp|location=Sequence derived from alignment at sc0000082_pilon:1006368..1010180+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAATTCAATATCGCAAGAACTTTCTCAGAAGAAACGTGGAGTAGG
AGCCATAAACCGACTAAATGAACCGCCCAATCAAAAAAGGTATACAAATT
CGTATACTATCGACGCTTTTAATCAGAATCCACCCATCAGCCCCCTTCCG
CCCAAACTACCAGACACGTTGGGTGAACTGCTAGCAGAATACAATCTTCA
AATGTATTTACCGAAGCTGGAAGGTGAAGCGTTGGATGTAGCAACGTTTT
TGGAGTTGTGCGATAACGATTTGAAAGAATTGGGCATTGATAAATTTGGA
CCACGTAAAAAGATGTTGTTAGCAATACGAGAATGCAAAGAGCGAAAGGC
TGCTCATGACCCTAATaaaaattgcaaagcaTTGATGGAGACATCAGAAG
AGCTCCAGGAACACCTAATCGGCTgtgttgaaaaaggaaaatggaGATGC
AAATTTGCTGGGTGCGGGAAAGAATATGCGAATTCAAGCAATCGGTCGAA
ACATCATCGAGTgcacaataaaagaaaatcatataAGTGCGATGTCTGTG
ATCTATCGTACGATTACGCAAATTCGTTAAATAAACACAAGAAGCGCGCc
cattaaATGATGAATTCAATATCGCAAGAACTTTCTCAGAAGAAACGTGG
AGTAGGAGCCATAAACCGACTAAATGAACCGCCCAATCAAAAAAGGTATA
CAAATTCGTATACTATCGACGCTTTTAATCAGAATCCACCCATCAGCCCC
CTTCCGCCCAAACTACCAGACACGTTGGGTGAACTGCTAGCAGAATACAA
TCTTCAAATGTATTTACCGAAGCTGGAAGGTGAAGCGTTGGATGTAGCAA
CGTTTTTGGAGTTGTGCGATAACGATTTGAAAGAATTGGGCATTGATAAA
TTTGGACCACGTAAAAAGATGTTGTTAGCAATACGAGAATGCAAAGAGCG
AAAGGCTGCTCATGACCCTAATaaaaattgcaaagcaTTGATGGAGACAT
CAGAAGAGCTCCAGGAACACCTAATCGGCTgtgttgaaaaaggaaaatgg
aGATGCAAATTTGCTGGGTGCGGGAAAGAATATGCGAATTCAAGCAATCG
GTCGAAACATCATCGAGTgcacaataaaagaaaatcatataAGTGCGATG
TCTGTGATCTATCGTACGATTACGCAAATTCGTTAAATAAACACAAGAAG
CGCGCccattaaATGATGAATTCAATATCGCAAGAACTTTCTCAGAAGAA
ACGTGGAGTAGGAGCCATAAACCGACTAAATGAACCGCCCAATCAAAAAA
GGTATACAAATTCGTATACTATCGACGCTTTTAATCAGAATCCACCCATC
AGCCCCCTTCCGCCCAAACTACCAGACACGTTGGGTGAACTGCTAGCAGA
ATACAATCTTCAAATGTATTTACCGAAGCTGGAAGGTGAAGCGTTGGATG
TAGCAACGTTTTTGGAGTTGTGCGATAACGATTTGAAAGAATTGGGCATT
GATAAATTTGGACCACGTAAAAAGATGTTGTTAGCAATACGAGAATGCAA
AGAGCGAAAGGCTGCTCATGACCCTAATaaaaattgcaaagcaTTGATGG
AGACATCAGAAGAGCTCCAGGAACACCTAATCGGCTgtgttgaaaaagga
aaatggaGATGCAAATTTGCTGGGTGCGGGAAAGAATATGCGAATTCAAG
CAATCGGTCGAAACATCATCGAGTgcacaataaaagaaaatcatataAGT
GCGATGTCTGTGATCTATCGTACGATTACGCAAATTCGTTAAATAAACAC
AAGAAGCGCGCccattaaATGATGAATTCAATATCGCAAGAACTTTCTCA
GAAGAAACGTGGAGTAGGAGCCATAAACCGACTAAATGAACCGCCCAATC
AAAAAAGGTATACAAATTCGTATACTATCGACGCTTTTAATCAGAATCCA
CCCATCAGCCCCCTTCCGCCCAAACTACCAGACACGTTGGGTGAACTGCT
AGCAGAATACAATCTTCAAATGTATTTACCGAAGCTGGAAGGTGAAGCGT
TGGATGTAGCAACGTTTTTGGAGTTGTGCGATAACGATTTGAAAGAATTG
GGCATTGATAAATTTGGACCACGTAAAAAGATGTTGTTAGCAATACGAGA
ATGCAAAGAGCGAAAGGCTGCTCATGACCCTAATaaaaattgcaaagcaT
TGATGGAGACATCAGAAGAGCTCCAGGAACACCTAATCGGCTgtgttgaa
aaaggaaaatggaGATGCAAATTTGCTGGGTGCGGGAAAGAATATGCGAA
TTCAAGCAATCGGTCGAAACATCATCGAGTgcacaataaaagaaaatcat
ataAGTGCGATGTCTGTGATCTATCGTACGATTACGCAAATTCGTTAAAT
AAACACAAGAAGCGCGCccattaaATGATGAATTCAATATCGCAAGAACT
TTCTCAGAAGAAACGTGGAGTAGGAGCCATAAACCGACTAAATGAACCGC
CCAATCAAAAAAGGTATACAAATTCGTATACTATCGACGCTTTTAATCAG
AATCCACCCATCAGCCCCCTTCCGCCCAAACTACCAGACACGTTGGGTGA
ACTGCTAGCAGAATACAATCTTCAAATGTATTTACCGAAGCTGGAAGGTG
AAGCGTTGGATGTAGCAACGTTTTTGGAGTTGTGCGATAACGATTTGAAA
GAATTGGGCATTGATAAATTTGGACCACGTAAAAAGATGTTGTTAGCAAT
ACGAGAATGCAAAGAGCGAAAGGCTGCTCATGACCCTAATaaaaattgca
aagcaTTGATGGAGACATCAGAAGAGCTCCAGGAACACCTAATCGGCTgt
gttgaaaaaggaaaatggaGATGCAAATTTGCTGGGTGCGGGAAAGAATA
TGCGAATTCAAGCAATCGGTCGAAACATCATCGAGTgcacaataaaagaa
aatcatataAGTGCGATGTCTGTGATCTATCGTACGATTACGCAAATTCG
TTAAATAAACACAAGAAGCGCGCccattaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000082_pilon | genome | sc0000082_pilon:1006368..1010180 + |
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