|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:1370556..1374336- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11341.1.p1 ID=MSTRG.11341.1.p1|Name=MSTRG.11341.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3781bp|location=Sequence derived from alignment at sc0000081_pilon:1370556..1374336- (Clytia hemisphaerica_ch_hm2_pilon)
TAATTTAATTAATTAAGATTAATGCTGTGAATGCGCTATATCGTTTACCT
GACTTTCAAGCAAAAAATGCGCCGCAAAACTTCTAAAGGGATTCATGGAA
TAATAACCCAGCAGCGCTTTTAAATGAAATTAACGTTTTCAAAAACTATG
AGAAATTGCCTAAAATTTGAGCCATAGATGAAATAATTTGAGCCAAGCCA
ACCTTGAGAACTAATTTTAAGATCAACTTCCCAAGAAAAAGATCTACGGA
GGAGACGGAACCCACCTAGATCCGCGCACTGCCGGATAGGCTATTTCCCG
GAAATTTTTTGCCGGACCTGCAACACTGACTCATTTTACATGTATGGAAT
TGTTTTAACTTTAGCGTATAAACTAGGCCTTAAAAATCAAAGCGCTGTCT
CGGTAATGGAATGACAAATTTTGGTTGGTTGATTTTGGCTGCTGCTGCAC
GTTTTATTTTGTTTCAAACTTTCAAGTTTTAATTAATTGTCTTGCGAACT
TGACTTGATTCAGGTACCGTCAACTGCTCCAACTTGGGACTATCTTACGC
AACATGGGACGGCAATTCCACCACCATTTCACCGAAACTCCAAAGTCATT
TGATTTGAGTTTAATGAACTGCATATTAAAAAATACACAATTTCTCTTTC
GCACAGAGTGGGCTTTTAAATCGGAATATGAAAAATATCCGTAACGGAAC
ACACGCCAGTGTCTGTGCACTCTAAGAGGAACAAAGAATTATGATTGGCG
ACAAACTTGGTGCAAGTATCAAAACAAATTTGTTGTCAAAGTGATTTAAC
AGTAAGTAAAAATACAGGCCAGACATCAACATTTCCCATGTTGCGTACAC
TCGTCCCAAGTTGGAGCAGTTGACGGTAACTCTCATGTCATCAACTGAAA
TTGTGAAAACACCTAAAAATTCAGCCAAATTTCAAAGTCACACTCAAGCA
TCATAACAGGTAGCTTATGCCCCAAGGGTCCAAAAAAAACAAAAAACGTC
AATTATTTCCAAGGAAAAGTGAGTTTTTAATTTAAATTTGCGAAAGATTT
GCACCTTTAAAAAAGCAACTTCTCCCCCAAAATGCTAGTTTCCATACTCT
TTTGTTTACATTCGTTACGTCATAGATTACTTATATCCCTATACGGCTAT
GTGAAGCCCGTGATAGACGGAGATGTCTCTTAATGCTGGGCTAGCGTTAC
AGAAATTTTTCATAAACTCATTTAGTATAGTAAGATTATTCTTTTGCCTT
TTAGGAATACGAAAAGTCTTTGGAAAAGGAGAAATATTTTTTTCACCTAG
TTTGTTTGCAACTTATATTATTGGAAATCTACTGGCCGTAACATATCAAA
AATTTTACAGCTCACTATAAGTCAGTTTTATTAAAAATATTTCTAAGAAG
CTTTTTGTTTAATCCTCCAAGCAAATAGAACTGTTAGTTGGCTTATAAAT
TAGTCTATAATAGAGTGGAAAATGCATATTTAGAAAAACGCATCATGAAA
ACTAAAAATTTTTGCCACAGCAGTGCACAGATTTAGATTGTTTTGTTTGC
TAAAAAGTGCGATGCAATTTTAAATTGTGAACTCAATCCCTGCAAAACCT
TGTTAAACAAAATGGCTGTCTGCTGGGAGGCTGTTTGCAGGTGGCTGGCC
TTTTATTGTTGTTTTAGGCAGTTTCGACAGTCTTTAGAGTTTTTCATTGA
TGTTTTAAAAAATGTAAAATTCGGTTTCCAAAGTTTCGAGCTTCTATCAA
CAAGCTTTCACTCACAAACAGTATCAAACAAACTTTCTCAAACTGTTCTA
GGTGTACCAGACTCTATAATTTTAGAAATTTGTATGTTGCTTAAAGGTTT
AAAAAGGTTTTGTTTTTAAATAAGAGTGATATCGTTTGCTTATTTATCAA
TTTTAATTCTCAAGCTTTTTCACATTAGATTAACAAGGATGTGGAGCAAA
ATTGGTCAGTAAAAGGGAAAGAACAAATTTTTGCTTATATTTTATCAGCA
TAACATAACAATAACAAGACACTGTCCAGAAATGAAATATGTGTCTGATA
TGAAACGGAAACACTTATTTAAAAATAAAACCTTTAACAAGTCCAATATT
ATGAGCGTGTGAAAGAGCTTCAAAACACCGGCAAAATTTAACCGTTTGCA
CTAGGGAAAGTAATGTGTGGCATAGTAATTTGTTTTTAAATAGACCATCT
CGTTCACTTAAAGGTCTTATATAAGACCTCTCGAGTCTCTATGGCTATTA
TAAAGCAAACTCAGTTTTTATAACTGTACGAAACGTCTAGTAGTTTTATT
TTTCAGAGAAAGTAACATTATATTCTCACATACTTTATAGTAGATTATTT
GGTTTGTTTTGAATGCCTTTGATCATAAATGGGTGGAAAGCGTGGGACCA
TTGGTATCAATATTGACAATTTCACATCAATTGATAACCGAAGTGGGTGG
TGTTCATCATCACGGACCTCTCTACATGGTGAGCTAACCGATGAATCTAG
AAACAAACCCTTTCTTGTACGCCACTGGACTACAATCTCCAGAGCATTTT
CACTTTGTTTGGTTCTTTTAACATGGTGCTTAATCATGATTTTTGCAATC
AAAGAACAAATCAACATAGGGTTTTACATGGTGTTTTTAGCAACAATTGT
AACTTTCTTTGAAACAATGTTTATATTTGATTGGTTGTTCGGGCATGTAG
AACGTAAAGATACAAAAGCACAACGGTTATGGGAGTTCCTTGAAAATATC
ACAACTTGGAAGAAACTTTTGATGTATATTATATTAACCATTCCTGCTTT
CGTGAGACCCAATAATTCACCGGTAACTCTTGCTTGTGGAATTATTATAA
ACATCATTGGTGTGATAGACTTTATTCATCTGTTCAGAGATAAGACACAG
CGAAAACCAATACGATATAGTCAATTGGGTGTTACATCCTTTTGATTTTA
GTCAACACTTTTATATGATTTAAATGTATTGTCTGGGAAATGGTATGGAT
TTTATTATATTATTTATGATAAAATAAATAGAACATTCTGTTAGCTTGGT
GCTGTCGATTTTTTGTCTTTTGTTATTATCTAAGAGTCACAAGATTTCCT
CTTTTTTACTTTCTTTGTAGTTGTACCTCTAAGGGAACAAGCCTTTATTA
TGTTGCACAGGGAAAGGAATCAAATTTAATTTTTGTTTCCAGGATAACTA
TTTATTTTGACACAATCTAATCCAATACGAATTTAAAACATTTATGGCTG
TTCTAGTATTGGATATTGTTAAGTCATGTCTAATATATTTGCTTGCCACA
CAAATAATCGCCTCTTTTAATTACTATTTTTATACTAAAAAACTTTTCTT
TCTAAGGAATATTAGTTTTAGAGCTGAAATAAAATTACAGTATTTTATGG
GGCAGGAAATTTAGAGTTAAATGTAACTTTATAATAATCAGTATGAAAGT
TTACTTTTTAAATGTTTCAACAATTTTTTATGAAATTATATAAACACATA
GATATATTATTCTTTATTATTTATTTGGAGAAATTTTATTGAAGAAAATA
TTATAAGTAAATATTTTTTTTTGAATACTTTGGTTTTTGTCATTATTATT
ATTATAAGCAGGAATATATTATTTTTTACTTTGGTAGTGGTATAAAAACA
TTTTTGATTCAAACAAAATCATCAAATTTCTGTCATATACAGGTACCTTA
TTAGAACTAATTTTCGCGGGAACTAATTATTGCGGTCGAAAAAAATATTC
GAAAAATTGCATTTCGCGGGTTTTAATTTTC Coding sequence (CDS) from alignment at sc0000081_pilon:1370556..1374336- >MSTRG.11341.1.p1 ID=MSTRG.11341.1.p1|Name=MSTRG.11341.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=567bp|location=Sequence derived from alignment at sc0000081_pilon:1370556..1374336- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGGAAAGCGTGGGACCATTGGTATCAATATTGACAATTTCACATC
AATTGATAACCGAAGTGGGTGGTGTTCATCATCACGGACCTCTCTACATG
GTGAGCTAACCGATGAATCTAGAAACAAACCCTTTCTTGTACGCCACTGG
ACTACAATCTCCAGAGCATTTTCACTTTGTTTGGTTCTTTTAACATGGTG
CTTAATCATGATTTTTGCAATCAAAGAACAAATCAACATAGGGTTTTACA
TGGTGTTTTTAGCAACAATTGTAACTTTCTTTGAAACAATGTTTATATTT
GATTGGTTGTTCGGGCATGTAGAACGTAAAGATACAAAAGCACAACGGTT
ATGGGAGTTCCTTGAAAATATCACAACTTGGAAGAAACTTTTGATGTATA
TTATATTAACCATTCCTGCTTTCGTGAGACCCAATAATTCACCGGTAACT
CTTGCTTGTGGAATTATTATAAACATCATTGGTGTGATAGACTTTATTCA
TCTGTTCAGAGATAAGACACAGCGAAAACCAATACGATATAGTCAATTGG
GTGTTACATCCTTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:1370556..1374336 - |
|
