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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:1293329..1296476- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11332.1.p2 ID=MSTRG.11332.1.p2|Name=MSTRG.11332.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3148bp|location=Sequence derived from alignment at sc0000081_pilon:1293329..1296476- (Clytia hemisphaerica_ch_hm2_pilon)
GGAAAACAACGTATTTCATGATTAAGTGTTGTATATGAGTTTTTTTGATT
TGATTTTGAAAGTAAAATGGCTAATCAAGTGAATATTGCAGGTATCGCTA
ATCAAACGAATATGGCAGGTATCACGCAGAAAGTTTTGTCTTTGAAACCA
TTACCAATCGATCCAACCAGATGTACTCCCAACAAATCGTTGTATCAGCA
GATTCTCAATAACAGTCAAGCCACGTCAGAAAGACAAGCAAAACAGTTCA
ACTTGGGGAACTCGCACTGTACAGCAAACCCTATGCATGCAGCCGACTTT
GTTCTTGAAAGGGAGTATGGAGACAGTTCTCTCTTTGTTCAAGGTGAACG
CACCAGTGTTTTCATACCACCCACGTTTGTTTCGAATCAATACAAAAAGT
CTTCTACCGCTATCCTTGATTATGACGTCAAAAAAGACATTGACAGACTT
TTGGTTAGTTTGAAACAACATTCACCAACGTATTGGCTGACCAAAGAATT
GGAATCTTTTATGCAAACGCAAAACAATGCTGATTCTGTCGACAAGAAGG
CGTTTGGGAAATGGATTCTTAACCTTCAAATCATGTATCTGGTTATTAGT
GAACTGAAAACTGACCAAGTGACCCTGCCTAAAACTACTTCCGAATTAGG
AGTTTTCTTTCAAGGATTTCTTGCAGTGCTCTCTCCCACATCACCTCTGG
GGACACTTCTCCTAAAAAATCCGAAAAACCTCAAAAAGCAGATCAAGCAA
ATGATTGAAGAAACACCAAGCGATGATTCAAACCTTCGATGGCTATTCAC
ATTAGAACTGTCAGAAGTTGGTGAAAAGCTGGAACACTGGTTATATGACC
AGCTTCTACCATTGAAAGATGACAATCTCCAAAACACAGTCGTTCTTTCT
TCACTCATCTTTCTGACAAATGTGCAAAATAAAATGCACAAAGAGACAGA
TTTTCTAATCATATCTTGGGAACGGAAACTTATCATTTCAATCGAGCTGA
AACGAACAATCGCAGATGATAAAGCTTTCAAGCAGTTAGAATCAAACCAT
CGGATTTTCGAGGAAAGGTTAGGGGACCAATTAATTTCAGGTTGGACGTA
TTTTCCGGTGGTCGGCGTGGAACACGACAACCTTTCAGTAAACAGTCAGC
ATTATATCACAATCCAAACTGAAATAAAACAATGGCTGACCAGTATCTTC
AAAAAGTTCCCGACTATTCCAGCAGCGTCCATACCGAATCCATTGGACGA
AGCTAAGGAGATACTCAAAATCCTGGTCTTTGCCATTCACGTTTCGAAAA
AAGATCAAACCGCACCTATTACGAGCTCAACATGGGTCGAATACACAAGC
AACGCAATCGAAAATGTTTCGACTAGCCACAACATCTTATTCTACTCCAA
CCAACAGATGGCCATAATGAACAACGATGACCAACGCTACAGGAGAGCGA
TCATTGTTGGGCCTTTTGGTGTTGGAAAAAGCATCTTACTTAAACAGAAG
GCCATACAATTAAACAAAAGACCTGAATACAAAGGAAAAGTTTTATTTGT
TGTCGATTCGTCTTACGTAACAGCCACTAAACCCATGCAATTTCATCGTC
TGAAGATTGACTTGGAGAATCAACATGGAATATTTGTTGAAGAGATCAAT
TCGCTTTTGGTAGGTAATCAATTGTTTAATGATTGTGATGGATTGATCTT
TCATTTTTAACTTGTAAAATCTTTATTCTTGAGGTGTCTTCCTTTTCATG
TTTTCAAACAAGTAAAGAATATCTTTTTCATTTTCATTTGATAGTCATCT
CAAAGAGGTCATCAAACCACGTGACATCAAAGCATCGTTCATCGATGAAT
TTGACACCTGGATATTTCAAGTCTTACATAATCGGTTTTTATTATTCATT
TCATAGACTCAGAAGGTTCGTCTTGTTGACATGATTATAAGACGGGACAT
CAAAGCGTTGTTCATCGATGAATTTGAAGTGTTTTCACGAACTGAAAAAT
GGATAAGGAAGGAGGTGATGCCACTCGTTGACTACTTATGGATCGTCCCA
TCGACAGACTTCTTGAGTGATGGAAGTTACCAAGAATTTTCGACTGACTT
TTTAGTCGTCAATCTCGAACAGAATTTTAGAAATTCTCAACAGATCGTCA
AAGCAACCAACTCAGTAGCCGAGGAGAAAGGTTATGTATACAAAAAAGGG
ATCGTTATGCCACTTGGTAATTTTCCGGATGGTTGCGAGCCAATACTTGT
TGACACGTTCGAAGAAGCAGTAATAGAAGCGAGAAAACGAGCAAATGAAG
GAATCCTTGTGATTGCTGATCAACGAATCAATACAAAAGATCATTACGAC
GTTCTAGATCGGTTGAACGAGAATTATAAAGCATATCACTTAATAAAAAA
TGATTTTAAAGAGGAAGAAAATCCGTTTAAGTTTCTTCAGGAAGGAAATA
TTTTGGTCATTTATACATCTGCATCTTATGGATTTGATTGGTCCACGGTT
ATTGTATTAGAACAAATCAGTGGCCACATAACTCACCATCTTTGTAATTT
CATGTTACGATGTACCACAAACCTCATTGTGGTAAAGGAGAGAGAAGATG
AAAGTGATTCAGAGGACACCAGTGAAAGTGATTCAGAAGAAGATGAAAGT
GATTCATTTGTAATCATTATGTAGATAGACCGGTTTAGAGGCCCTAGTGT
GCCTGGACTGTAAATCCTTTAATAAATAAATAAATAAATAAATAGATTCA
GAGAGACGACACCGGTGGTTGATAATTTTAATATTATACTTTTAATTTTA
AATCAGCACTTTACTCATTTTGTCATTTTTAAATAAAGATTTTATAACAT
TTTTCTCAATTATTTCAAAAGTAAGTTTAATGAAAATATACCATCTTTAC
ATTTACATTTTTGTACACTCAGTCAATATTATTTTACACACATAAACACA
TTTTAGAAATATACTTTGATTCTTTCATATTCTTAATTGTAAATCAGCAT
TTTACTCAATTTTTTATTTTAAAATTAATATTCTAAAACTATTTTATCTA
GGATTGATCTCTTCACTTGGATGAAGAATAAATAAGCTTTCGGGTGCGGC
GCTATGGTAGAAAAGGTGTATTGGCTAAAGCAAAACAATCGCAACAAA Coding sequence (CDS) from alignment at sc0000081_pilon:1293329..1296476- >MSTRG.11332.1.p2 ID=MSTRG.11332.1.p2|Name=MSTRG.11332.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=744bp|location=Sequence derived from alignment at sc0000081_pilon:1293329..1296476- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTATAAGACGGGACATCAAAGCGTTGTTCATCGATGAATTTGAAGT
GTTTTCACGAACTGAAAAATGGATAAGGAAGGAGGTGATGCCACTCGTTG
ACTACTTATGGATCGTCCCATCGACAGACTTCTTGAGTGATGGAAGTTAC
CAAGAATTTTCGACTGACTTTTTAGTCGTCAATCTCGAACAGAATTTTAG
AAATTCTCAACAGATCGTCAAAGCAACCAACTCAGTAGCCGAGGAGAAAG
GTTATGTATACAAAAAAGGGATCGTTATGCCACTTGGTAATTTTCCGGAT
GGTTGCGAGCCAATACTTGTTGACACGTTCGAAGAAGCAGTAATAGAAGC
GAGAAAACGAGCAAATGAAGGAATCCTTGTGATTGCTGATCAACGAATCA
ATACAAAAGATCATTACGACGTTCTAGATCGGTTGAACGAGAATTATAAA
GCATATCACTTAATAAAAAATGATTTTAAAGAGGAAGAAAATCCGTTTAA
GTTTCTTCAGGAAGGAAATATTTTGGTCATTTATACATCTGCATCTTATG
GATTTGATTGGTCCACGGTTATTGTATTAGAACAAATCAGTGGCCACATA
ACTCACCATCTTTGTAATTTCATGTTACGATGTACCACAAACCTCATTGT
GGTAAAGGAGAGAGAAGATGAAAGTGATTCAGAGGACACCAGTGAAAGTG
ATTCAGAAGAAGATGAAAGTGATTCATTTGTAATCATTATGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:1293329..1296476 - |
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