|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:1183219..1185767+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11325.1.p1 ID=MSTRG.11325.1.p1|Name=MSTRG.11325.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2549bp|location=Sequence derived from alignment at sc0000081_pilon:1183219..1185767+ (Clytia hemisphaerica_ch_hm2_pilon)
ttttttttctgtatCTCACCTTTAGCGAGTAAAGTGAGATGAAATTCTCT
TTCAATCTTATAATATTGTTAGTGttaatagatttttttcttcccactca
gttttccaagtttttaatatatttttatcttttcatttcattttgagaca
gtattttttgttttgccagCGTGGAGAGAAGAAGGATCATCCAAAAGGTT
ATTATTTTGTTCCGACGAATTTTTTCTGCAGTTTGAacggttaaaaaaat
tttattttgagttTGTAGCAATTCGAAAAATGTTATAGAAATAATATTTA
GTACTTTTCTCTCAATGAACCCTAGTGTAACGAAAATCTTAACTTTTCTA
TGTTCATCATTTCTGCTGAGATTTTGCAGACTATTGTATATTCCAGTATA
TCTTTCCGgcaaaattttattcatttattttgcTGATTGGATGATTGGAA
TTTAGATTTAAATACGGTTATTCGACGACTTCACTATCTTATGGATAGTT
TTTACAATTTATTGGGTTCCTAGCTGAAGTTCTAAAGTAAAAGAGAATTT
TGCAAATTggccattttttcaaattttgtgaaGTGGATCGCTCCTATACG
ATCAAATGAATGAGAGATACATTTCCAGAAAGTATGCCccgaaaacgtca
aaaagtcgAAATATAGACACTCGTACTCTCtactttactacagtgtactt
ttacttttacgtttttcactttttctctagTTCAGATAATATGACGACAA
AGACAGGCAAAGGTGGTGTAACAATCTATTATGAAAACTGGCTTCTACGT
AAAGAAGGCGTCAAACAGTGGGCGGAATATTGGGGCGTGATCCGTGGTAA
ATGGCTTCAATTTTACGAAAGGACAAGCGAATATAATCGACCAGAGTTAC
GTAAAACGTTGGAAATAACTACAAATACGAAATGCGCTTTGGTGAAACGT
AACAAAAATAGATATCCGTTTTCTATCGATAACGGTAGTGGAGTTTACTA
CATGAAAGTTGAAACAGAACTGGAACGTTATCATTGGATTGTGTCAATCT
TAACGGCTTCCTTGGGTAAACCGAAACGGGAATTACCGGAACAAGTTCCG
GAAACGATGAAAGAAGCGGAAACATTCCGGAAATTAACGAAAGTGGAGAA
GCAAGAAATGAGGAATAAGCTACCGCCGAAACCAAAGAAAGAACCAATCC
CTGCGTCTGACATAACTAATAAGCGTCGGCGTAAATTCGCAGAGAGGCGG
GAAAATAAGGTGAAGAAAAAAGAGAGAGCTCGTTTAAGAAAGTTGGGTTT
GGATCCTGATGAGCACATGGAAGGAGGGTCTAACGATGACGAAGAGCTGG
AAGAAATTTCAAGGCATCCTGAGCACTTCCGCAGAGcacaaaatgtaaac
aagctAACGAGCGAAAATCTTGCGTTACATAATCGGAATAAACTATCGGT
CGATGATCGTATTCGTCAACGAGAAAAGATTCTTGGCTCATCACCCAATT
TCTTGAAACCGAAAACTTCCGAATTAGAATCATCGCAAAGCACGGTGGAA
ATCAAAGCTATGATACATCCGCCGTCAGCTTCTACAGCCAATAAGAAGCA
AGAAAGAAATAGTGATTCTTCTCACTATAACCGAGCATTTGAAAACGACG
ATATTGAAGAATTACCGACAATTCCCGTCACTTTGAACGATGATGGATTA
TTGCCGAATATGGTGTTCACCGAGCTTTCCGACAGCGAACCGGAAGAGCC
AACAACCGAAGAAATAAGCATAAACAGTAATAACGAGTCTTTATTAAACA
TTGGCGATTTCGATATGACCCAACCAAGACGCGGTAGCGCCACGATCCTG
TCACGCACCGTTCTCTCTGAGAGCGGAGTACGTCAATATTCGGAGTCCCC
AGATCCAATAAAAATGATGAATCGGGGCGGAAAACGCCCTACTAGTGCTA
AATTATCACCGGGTGGTTTAATGGAACGCCCCATTAGTCCTTTAATGACA
AGACCAATGAGTCCATTAATTGGAGGTTCGGGACGCCCAAAAAGTCCAAA
TAACTTGAAGAATAGTGATGACTTTGCAAGGTACTTAGATGAGACCTCCA
CTGTGTGAATCCTAATCGAATTCGACGAATTTcagatataatttttattt
tgtgtggcgtgaatttttttgttaacCTTGTGTGGTATTTAGGggggaaa
aagaaaatttaaagtatGATACAACATTAGAAGAACTTGTCTTTCGTGCC
AGAATCTGCAAACAAGGACTTTTTTCGAATAACTGGTATGATCAGCTAAT
GGTCcaataaaattgagtttttacattaagaaaaaagttaaaatttggcT
CAAAATTTGGTACATTATCGGAGGAAAGTGACGAAGACTTTAAAGAGGTG
ATGAAATTTTTACccgtcgaaaaaaaatttcccgtcATTTTATTATCTGA
CAAAGCTTGGAATGGATTTTAAAGAggaaatttggcggatttttttGTCC
AAATACCCTCATTACATAAGTGCAATTTGATTTTAAGCCTTGAACAAGC Coding sequence (CDS) from alignment at sc0000081_pilon:1183219..1185767+ >MSTRG.11325.1.p1 ID=MSTRG.11325.1.p1|Name=MSTRG.11325.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1368bp|location=Sequence derived from alignment at sc0000081_pilon:1183219..1185767+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGACAAAGACAGGCAAAGGTGGTGTAACAATCTATTATGAAAACTG
GCTTCTACGTAAAGAAGGCGTCAAACAGTGGGCGGAATATTGGGGCGTGA
TCCGTGGTAAATGGCTTCAATTTTACGAAAGGACAAGCGAATATAATCGA
CCAGAGTTACGTAAAACGTTGGAAATAACTACAAATACGAAATGCGCTTT
GGTGAAACGTAACAAAAATAGATATCCGTTTTCTATCGATAACGGTAGTG
GAGTTTACTACATGAAAGTTGAAACAGAACTGGAACGTTATCATTGGATT
GTGTCAATCTTAACGGCTTCCTTGGGTAAACCGAAACGGGAATTACCGGA
ACAAGTTCCGGAAACGATGAAAGAAGCGGAAACATTCCGGAAATTAACGA
AAGTGGAGAAGCAAGAAATGAGGAATAAGCTACCGCCGAAACCAAAGAAA
GAACCAATCCCTGCGTCTGACATAACTAATAAGCGTCGGCGTAAATTCGC
AGAGAGGCGGGAAAATAAGGTGAAGAAAAAAGAGAGAGCTCGTTTAAGAA
AGTTGGGTTTGGATCCTGATGAGCACATGGAAGGAGGGTCTAACGATGAC
GAAGAGCTGGAAGAAATTTCAAGGCATCCTGAGCACTTCCGCAGAGcaca
aaatgtaaacaagctAACGAGCGAAAATCTTGCGTTACATAATCGGAATA
AACTATCGGTCGATGATCGTATTCGTCAACGAGAAAAGATTCTTGGCTCA
TCACCCAATTTCTTGAAACCGAAAACTTCCGAATTAGAATCATCGCAAAG
CACGGTGGAAATCAAAGCTATGATACATCCGCCGTCAGCTTCTACAGCCA
ATAAGAAGCAAGAAAGAAATAGTGATTCTTCTCACTATAACCGAGCATTT
GAAAACGACGATATTGAAGAATTACCGACAATTCCCGTCACTTTGAACGA
TGATGGATTATTGCCGAATATGGTGTTCACCGAGCTTTCCGACAGCGAAC
CGGAAGAGCCAACAACCGAAGAAATAAGCATAAACAGTAATAACGAGTCT
TTATTAAACATTGGCGATTTCGATATGACCCAACCAAGACGCGGTAGCGC
CACGATCCTGTCACGCACCGTTCTCTCTGAGAGCGGAGTACGTCAATATT
CGGAGTCCCCAGATCCAATAAAAATGATGAATCGGGGCGGAAAACGCCCT
ACTAGTGCTAAATTATCACCGGGTGGTTTAATGGAACGCCCCATTAGTCC
TTTAATGACAAGACCAATGAGTCCATTAATTGGAGGTTCGGGACGCCCAA
AAAGTCCAAATAACTTGAAGAATAGTGATGACTTTGCAAGGTACTTAGAT
GAGACCTCCACTGTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:1183219..1185767 + |
|
