|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:958061..960471+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11308.1.p1 ID=MSTRG.11308.1.p1|Name=MSTRG.11308.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2411bp|location=Sequence derived from alignment at sc0000081_pilon:958061..960471+ (Clytia hemisphaerica_ch_hm2_pilon)
ACGAAATAAACCCAGAGCTGATGAAGGACAGACAGCCttgcttaaaaaag
aaaaaaaagcgaAAACACTTTGTGACGAAAGGACCAGACTGGGTTTTTTC
GCTGGACGGGCATGATAAATTAATGGGTTACCAAAACTCGACATTCCCCC
TGGCAATTTATGGCTGTATAGACACAGCGAGTAGAAAGATAATGTTTCTC
AAAGTCTGGGTTACGAACtcaaaaccacaagtgattggCCGATGGTATAC
TGAATTTCTACGTGAAAATCAAATTGTCCCAGAATATTTAAGAATTGATA
AGGGAACTGAGACCACGACCATGGCCGAGATTCACTGTCATCTAAGACAA
GAACATGGTGACTTAGAAGACTCGACATCATCAATTATATTTGGCCCTTC
GACATCTAATCAGGCATGTTATTTATAATCTgaagtttttttctctttta
acacactaaatctttctcttttaaaaACTATTTACAAGATCAAAACTTTT
CATAAGTAAAATATCACCATGCAATATCACCAGTACAAGGAATTTTCAGG
GAATAATTGCTAACTGATTTCTATGATTTTGATATAACAGATTGAACGTT
GGTGGAGAGAGCTCCATGATCGTTTGGAGAAGTTTTTCAAAGCTGGTCTT
TCCTGGCTTAAAGACGAAAATCACTACGACCCTCATTGTGCACAAGATAG
GTTAGTTGTTAAAGTAAATTTAATCTACATAGAAATAtacacttttaaaa
aaattgacctcTTAAAAAAGATATGCCAAAATGTAATATCTGCTTGTTTG
TTAACCCTAtctgccggggggggggggggtcttggtttttttCTCCTTTG
AATTTTAACCGCTTGCccaattcttttcaaatttcttgaCTTCTCTACAA
ATTCAAATATTACAGTCTGAGTGGCTGCAGATTCAACGATAACCGCCCaa
aatgcaaaatttaaaaaaaatatttttaaaattttaaattactataaaat
CTGAACCACTAATAACTGCCCATTTATGAGTAACTACAGAAAACAGAAGT
AAAAAAGCTTATTTCTACAAAGATCtgtctttttgaaaatacaGCCTAGT
ATTTTCCTCCATTCCGGTCAAtttttttGGCATGTGAAAATGACCCAAAT
aaaggaaaatttggaaaaaaatgtgcaAACTTCTTTGTATACAAAGTCTC
TATGTACCAAATTCATGCCAAAACAGTCTTGAGTTTGGGGGTTCCGGGAA
GCCCCTCCCCGGGCAACACCAGACCCCAAATAACCCAGGGCAGATAGGGt
taaagtgaaataaaaataataaaaatagctaaaaaataaaaaatagctga
gtaactaaaaaaaatagaccttaaaataaatGTTGTATCTACTCGTTTGT
Cgaacttaaataaaaaaagctaaataattgaaagtaaaagctaaaaacaa
atcgaaaacagttgtcaaaactaaaaagccaactgaagaacaaaataaaa
caacaataaGACCAAGAAGaataaattttccattttttagagATATGTTG
GCATTTGTTATGGTTCCCTTGGTTCAAAGACATTTGGACGAATTCAAAGA
TCTCATTTGGAACCCCCACAGAATAAGACACCAAAGAGACACATACATGG
CTGATGGAGTACCAAACCATATGTATGATTTTCCCGCCAAATACTCGATG
GAACAATGTGGTATGTGCTTTTATtcacttttcagaaaaattataTTCTC
TAGTATCCTTTAAGGGTACTCTTTTGTGTCTAATTGTAGGGGGGTTTAAT
AAGCGGAGGGGATGGGTGGTCTGGGaaaaaaaTCCacaaaatgggggggg
ggggtgacaaTAAAGTGATATTGGAGtgattttagtgattttccctagga
aaatgaaggtttttggcaCTTTTAGGCAATATCAAGTCAAAAAGTCGTAA
AATGAgggggggTCATAATAAAGTGAGATTGGGggtgaaaaatcagaaaa
attacaaagtgaCCCCCCTACCTGCCCCTACAATTAGGGACAAAAGAGTA
CAAACTtttatagaaactttttttcgcggtttttggCCTAACTGTAAAAT
TTATATGAGAAAAGTTATTGTGAAATAATCCATACACCCATATCAAATCG
gcaataactttttaaaatccCTTAACACAGTTTAACATTTCACATTTTAG
GAAAACCACTCAACAAAGACACACTTGATGAAGCTGTTCAAATTACAGGA
GTTATGGATTATGGAATTGACTTTCTTCTCCCAGATCAACGAAACCATTA
CCAGCAGTTCGTGAAAAATACTGTTACAGAATCTAATTATGTTCAAAGTT
ATCTAGATCTTAAATATAATCAAGCTTAGTATTTGTTTTACTAAATGAAA
TGTTATATAAA Coding sequence (CDS) from alignment at sc0000081_pilon:958061..960471+ >MSTRG.11308.1.p1 ID=MSTRG.11308.1.p1|Name=MSTRG.11308.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3480bp|location=Sequence derived from alignment at sc0000081_pilon:958061..960471+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAATAAACCCAGAGCTGATGAAGGACAGACAGCCttgcttaaaaaagaa
aaaaaagcgaAAACACTTTGTGACGAAAGGACCAGACTGGGTTTTTTCGC
TGGACGGGCATGATAAATTAATGGGTTACCAAAACTCGACATTCCCCCTG
GCAATTTATGGCTGTATAGACACAGCGAGTAGAAAGATAATGTTTCTCAA
AGTCTGGGTTACGAACtcaaaaccacaagtgattggCCGATGGTATACTG
AATTTCTACGTGAAAATCAAATTGTCCCAGAATATTTAAGAATTGATAAG
GGAACTGAGACCACGACCATGGCCGAGATTCACTGTCATCTAAGACAAGA
ACATGGTGACTTAGAAGACTCGACATCATCAATTATATTTGGCCCTTCGA
CATCTAATCAGATTGAACGTTGGTGGAGAGAGCTCCATGATCGTTTGGAG
AAGTTTTTCAAAGCTGGTCTTTCCTGGCTTAAAGACGAAAATCACTACGA
CCCTCATTGTGCACAAGATAGagATATGTTGGCATTTGTTATGGTTCCCT
TGGTTCAAAGACATTTGGACGAATTCAAAGATCTCATTTGGAACCCCCAC
AGAATAAGACACCAAAGAGACACATACATGGCTGATGGAGTACCAAACCA
TATGTATGATTTTCCCGCCAAATACTCGATGGAACAATGTGGAAAACCAC
TCAACAAAGACACACTTGATGAAGCTGTTCAAATTACAGGAGTTATGGAT
TATGGAATTGACTTTCTTCTCCCAGATCAACGAAACCATTACCAGCAGTT
CGTGAAAAATACTGTTACAGAATCTAATTATGTTCAAAGTTATCTAGATC
TTAAATATAATCAAGCTTAGGAAATAAACCCAGAGCTGATGAAGGACAGA
CAGCCttgcttaaaaaagaaaaaaaagcgaAAACACTTTGTGACGAAAGG
ACCAGACTGGGTTTTTTCGCTGGACGGGCATGATAAATTAATGGGTTACC
AAAACTCGACATTCCCCCTGGCAATTTATGGCTGTATAGACACAGCGAGT
AGAAAGATAATGTTTCTCAAAGTCTGGGTTACGAACtcaaaaccacaagt
gattggCCGATGGTATACTGAATTTCTACGTGAAAATCAAATTGTCCCAG
AATATTTAAGAATTGATAAGGGAACTGAGACCACGACCATGGCCGAGATT
CACTGTCATCTAAGACAAGAACATGGTGACTTAGAAGACTCGACATCATC
AATTATATTTGGCCCTTCGACATCTAATCAGATTGAACGTTGGTGGAGAG
AGCTCCATGATCGTTTGGAGAAGTTTTTCAAAGCTGGTCTTTCCTGGCTT
AAAGACGAAAATCACTACGACCCTCATTGTGCACAAGATAGagATATGTT
GGCATTTGTTATGGTTCCCTTGGTTCAAAGACATTTGGACGAATTCAAAG
ATCTCATTTGGAACCCCCACAGAATAAGACACCAAAGAGACACATACATG
GCTGATGGAGTACCAAACCATATGTATGATTTTCCCGCCAAATACTCGAT
GGAACAATGTGGAAAACCACTCAACAAAGACACACTTGATGAAGCTGTTC
AAATTACAGGAGTTATGGATTATGGAATTGACTTTCTTCTCCCAGATCAA
CGAAACCATTACCAGCAGTTCGTGAAAAATACTGTTACAGAATCTAATTA
TGTTCAAAGTTATCTAGATCTTAAATATAATCAAGCTTAGGAAATAAACC
CAGAGCTGATGAAGGACAGACAGCCttgcttaaaaaagaaaaaaaagcga
AAACACTTTGTGACGAAAGGACCAGACTGGGTTTTTTCGCTGGACGGGCA
TGATAAATTAATGGGTTACCAAAACTCGACATTCCCCCTGGCAATTTATG
GCTGTATAGACACAGCGAGTAGAAAGATAATGTTTCTCAAAGTCTGGGTT
ACGAACtcaaaaccacaagtgattggCCGATGGTATACTGAATTTCTACG
TGAAAATCAAATTGTCCCAGAATATTTAAGAATTGATAAGGGAACTGAGA
CCACGACCATGGCCGAGATTCACTGTCATCTAAGACAAGAACATGGTGAC
TTAGAAGACTCGACATCATCAATTATATTTGGCCCTTCGACATCTAATCA
GATTGAACGTTGGTGGAGAGAGCTCCATGATCGTTTGGAGAAGTTTTTCA
AAGCTGGTCTTTCCTGGCTTAAAGACGAAAATCACTACGACCCTCATTGT
GCACAAGATAGagATATGTTGGCATTTGTTATGGTTCCCTTGGTTCAAAG
ACATTTGGACGAATTCAAAGATCTCATTTGGAACCCCCACAGAATAAGAC
ACCAAAGAGACACATACATGGCTGATGGAGTACCAAACCATATGTATGAT
TTTCCCGCCAAATACTCGATGGAACAATGTGGAAAACCACTCAACAAAGA
CACACTTGATGAAGCTGTTCAAATTACAGGAGTTATGGATTATGGAATTG
ACTTTCTTCTCCCAGATCAACGAAACCATTACCAGCAGTTCGTGAAAAAT
ACTGTTACAGAATCTAATTATGTTCAAAGTTATCTAGATCTTAAATATAA
TCAAGCTTAGGAAATAAACCCAGAGCTGATGAAGGACAGACAGCCttgct
taaaaaagaaaaaaaagcgaAAACACTTTGTGACGAAAGGACCAGACTGG
GTTTTTTCGCTGGACGGGCATGATAAATTAATGGGTTACCAAAACTCGAC
ATTCCCCCTGGCAATTTATGGCTGTATAGACACAGCGAGTAGAAAGATAA
TGTTTCTCAAAGTCTGGGTTACGAACtcaaaaccacaagtgattggCCGA
TGGTATACTGAATTTCTACGTGAAAATCAAATTGTCCCAGAATATTTAAG
AATTGATAAGGGAACTGAGACCACGACCATGGCCGAGATTCACTGTCATC
TAAGACAAGAACATGGTGACTTAGAAGACTCGACATCATCAATTATATTT
GGCCCTTCGACATCTAATCAGATTGAACGTTGGTGGAGAGAGCTCCATGA
TCGTTTGGAGAAGTTTTTCAAAGCTGGTCTTTCCTGGCTTAAAGACGAAA
ATCACTACGACCCTCATTGTGCACAAGATAGagATATGTTGGCATTTGTT
ATGGTTCCCTTGGTTCAAAGACATTTGGACGAATTCAAAGATCTCATTTG
GAACCCCCACAGAATAAGACACCAAAGAGACACATACATGGCTGATGGAG
TACCAAACCATATGTATGATTTTCCCGCCAAATACTCGATGGAACAATGT
GGAAAACCACTCAACAAAGACACACTTGATGAAGCTGTTCAAATTACAGG
AGTTATGGATTATGGAATTGACTTTCTTCTCCCAGATCAACGAAACCATT
ACCAGCAGTTCGTGAAAAATACTGTTACAGAATCTAATTATGTTCAAAGT
TATCTAGATCTTAAATATAATCAAGCTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:958061..960471 + |
|
