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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:174351..182101+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11252.2.p1 ID=MSTRG.11252.2.p1|Name=MSTRG.11252.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7751bp|location=Sequence derived from alignment at sc0000081_pilon:174351..182101+ (Clytia hemisphaerica_ch_hm2_pilon)
agagCTTCTAGGGAAGATAAATTCTGATCAAGCCAGCCCCAATGGTTCTG
CTGGTTCCCACGATCATGTGAGAAGGCGGAGGCGGACAAATAGTggacga
aaagaagaagaagcaaaagcagaaaccaaagaaaagaattacacacctga
acaagtagaagaTGTTGAAAAGTATGCCAACAAATGAGTTTCTCACCTTG
CTTGCCTTCCTTTCTTATTTTGTTAATGATATATAGTTTTGATATAGTTT
GCCTTTTCCGTCAGCGGAtgcagacctgatttagcaggttgaagacctga
attaacgtTCAAAGACCTGAATTAAAGGCCAGagacctgaattaacggcc
AAAGGCCTGAATTAACGGCCAAAGACCTGgtttaacggccgaagacctga
tttagcaaGTCACTGGCCAAAGACCTGATAGATAAGTTAGGGTCAGTTAA
AGTAGCTAGAACCACTCGGCGAGGCATCAGTTGCGATGGTCCAGTGGTTA
GTGCAGTGGTATCGAAGACGAAAGATGTGTTTGAGAGTTTGAGTTATTGG
TATTATAGGATCCAGcccccccTCGGAGATTtggggtacctaaaaaaaaa
agtgttaaaaaagccaggtacctggaagtattcttaaatttagggagtac
ctgatatgtttggggtacctgcattttcattagtgggggcgggggctgtt
gtttttgtatgaagtcatcacccttgaattccttgaaacccttgaaacag
TCAATATTATTTTGGGGACGCTTGAAATGCAAGATTTatacccttgaaac
ccttgaaatgccaaattttgtggccattttcagccattttaactttcaga
aatacaaaatttttcccattgcgTGGGATACAAACATCGCAGtgacttaa
aaatgagaaaacatacttttgGAACCCCTGAGACTCAAGGGGATATTCAA
CGCTCATTCTTAGGGGGTTTACCTTTTAAACCCGTTAAGTGCCACTGGAA
TTATATGAGATTGGCAGGTCTGGGTGATAGAATGGGtggttgtaaaatta
tcaattatcagcCAATTTAAGGGCCCTCCTTTacacaaaaattgaatatt
tataAACCTTTCTCCTTTTGTCGACTGATTtccttgaaatctttgaaaac
tagcaaagatcaactaaaaaccctagaaacccttgaaagtttgtggttta
taaaaatctcttgaaacccTAGAAAATCATAGTCAAAAATGACAcccttg
aatttgttgaaaaggAAGTGATGGCTGCCATGGAAGTATTTTCCCAGGAA
Tgacaaaatagcaaaaaatccctttttgtatttttaacaataaaaaaatt
aaaaatggggTAACTCAAAGTTGGGGGGTTACTtttgaattctaaaaatt
ttgggggtaccAAAATGATTAGGGGTACCTAAATtttttgggggtacctg
aaccctggaggaccctatggcattttcattctttttagtttaaaatattt
aaacttaatttgttttcaatactAATTCCTattgaaacatcatataaaaa
tcttgattgaatttataaaaaaggtttaaaaaataacaaatttccaCAAT
TCATTATCTCCAGGTCTTCCGCCGATAAAAAAGGTATTCGACCGCTGCAT
CAAGTCTTCAGTTTCTAATTCAGGTCTTCGACTGCTAATTCAGGTCTGCA
TccgttgacggaaaaaaaatctgcgcCACGGatacaaaatgttgtttttt
aacaatttttgataatcTTTCAAGAGGTAAATCCTTCTAACGTTCCTAAA
GTCATGATAccactatttcttttttttagaataaaaaaatgtaaagattt
tTACGAAGTACTTAGTGTTTCGAAATCACCATCAGAGGCAGACCTGAAGA
AATCGTACAGAAAATTAGCATTAAAATTTCATCCTGATAAAAATCAAGCA
CCTGGAGCTGCGGAGGCATttaaaagtattattttttttcaaggcaAATG
TTTGCAATATCCATGGTTTATTGTTTAGTTAAAATGTTAAGGATTATATG
AACTTTTTAAGGATAATGATGAAATTTTAGTCATTATGTTGACTATGtgt
tattttttgataattgataataaaaaaatcgacagatttttatgatattt
tttatacttatggaaagtgaaatttttgtcTCCTGTCGGTATTTTAGATt
gaattaaatttaatttttcaaaggaATTGCTGCAGCATTTGAAACACTAG
GAGATCCAGAGAAAAAGCGAAAGTATGATACTTATGGAGAAAATGCTGGA
CCAACCACTCGACGCACTCGTAGAAACTATCACGAGGAAGAATTTGAAGG
TAACTCAACTATTTCTCCTTCTTtcaaaggccggtctccactttcgcgcg
aaattgGCGACAGTTTTTTcataaccttttttgcctgaagaaaagattac
gtcataaaaaagtttcgcgcgaaaaaaaaataaagttgaaggaagttact
ttttttatccgttacgtcaatttcaacCAATTGAGCAGAATGGAatcgct
tcatttttcaaccgaccaataaCCTTACGAAAACGTAAAAAGGTTTTCGC
TcgtgtcgcgcgaaagtggagactgaCCTTAACTTTTCATTGTTTATCTA
TGAAAGTCTTTAAAAACAGCCTGAATCATCCGAGGCGTGCGATAGCACGT
GCACGCCTCCACGCAACcagaattttttatttgtgCGATCAGCCTTACCA
CACGCCATAAATTTCTTGTAAAAATGGTGGTTAGCATTGTCTTATCACAT
GTCTAGAATCTCAGATTTAGGTGATTGACCTCACACATGGAGTTTTCAAA
TGACAAAACCTGTAAAAGTATAATTATAGAACTAAAACCTGAATAATATC
TTTATTCGTAAGGTTTTTCATCACAGCTGAAGGCCGGTGAGATTGTTGAC
CAGTTGAAGCTAGTGTTTATGTATATCATTTCTATCCTCATCACCACAAC
CTTCTTCTTCTGTTTTAGATATTTCACCGGAAGATATTTTCAATATGTTT
TTCGGCGGAGGGTTTCCCGATGGTAAGATAAACAAAGTTTTTGTCAACAA
CTtgcttttttttgtaataccagGAAATTGTTTATCCTACGAATGtataa
tgaatgaaaaaatagtttttcaccACAATTTCCATATTCAAAATTAGATC
AGTCCTGTCAGTAACAAGTAAATTTGCTTGATTTGTATATTATTTACTTA
AACCATACTATACAAGCtgaaacatgttggaaatttgCTTTTAATGGTTT
CTTGTCCGGAGCATCTTTCCAATACATGGAAAAAGACGCGCAAGCGATCT
AAATATCGTTTTAAGAAAAATGTCTTCTGTTTAATTTTGATTTGGCTACA
CATCATTACAAtgctttttatgtttcactttCCAATATATTGTAATATAT
TGTATTTTACTTTTTGATCACATCCCGTTAGGCCGAGTTCATGTTCGAAG
AGGACGTAGAGGTCAACAAACATATTTTCGTCAAAACACACATTCTCATA
ACAACAACCATCATCAAAACGAAGTAAGCATTGAAAATAAGTAATGTCTT
TGAAAAcctaaataaatcaaaagatcTGCGAAATGATTAAAAGTTTTGTG
TCCGctgtaaaatataattttgtcccggatttattttttgcaaaaaaact
aaTCCAGACATTggttaaaattaataaaaactttttgttttgttagcgAT
AGAGGGCGAAAATCagcgatgaaaaatgaaaatgttttgtccTACATTGT
TTGTTATTTTCTATcccaaaaaagaacaataaactTTTAATTCCTCACAT
GTCTAAATTCTTCGTACAGGTATTGGCgctggaaattattttttttctgc
agACACCTAGTCATAACACACAGTCATACCAGTCTCTTTCTATCATTTAG
TGATAGTGGTTTGAGTCTGGCACAATGTTTCAAAATTCTGTAGAGTTAGG
AGGAATTTCTGTGATATTTTATCTTAAGAGGGTGAATCTCTTTCTGGCGG
GTGCTTGCCACTATGTTTTACAAAAGTAATTCATccaatttctgtttttt
tcttcagaacGTATCTTCACTGTATCCTTTGGTGCAGATTCTACCTGTTC
TTCTTATCATCCTCTTCTCGATGCTCAGTAGTTTCCTTATTCCCGAACCA
ATATTCAGCTTTCAACCTACATCGTAAGTATATTACAATACACATTTTCG
ACTGTACCTGTCTATTCAGGggagggggggtcggtagtaaaatatcagac
atatatgagtaataaaaggatttttacgaatttttacataccaccaccca
gacttttggaagaggtattttactaccctggtagtaaaagtttttgggac
aatttgtcataaagaccacctattttttggttgcttttcggactgatttt
acaaaaaaagctaaacaatgattatttctgtgacacatttttcactttgt
gcaaaaataaatgtttttccCTTAAAATTTAAGTCTTTTCTATATTGACA
AAATatctcgagaattttttgtttgcagcaaacaactttccaacagaaga
ttttttcaagttattaaaattttcagattttttcagaaaagtcatccaaa
aaattaaaagaattacaaaaatagctaaaatttgctaattttaccagttt
taactacccaggtagtaaaactttttcaacatttaacacataaataccac
ccattttagtatttaactaccctgggtagtaaatcttttttcgatttttc
gtcacaccaccaccgtagtaaacgtcattatgtgtgagattttactaccg
accccccccctggtcTATTGCTACCCTAAAACcgccccagtctttttttt
tgcgCTTAAaggaaatagaaaaaagtgtaaaaaaagattggatcgagttt
agggtgtgaaattaaataataaagtggcacacgTCTGACTtgtgcgacta
cggtcgaaaagttgTATTCAGCAGTATTCagaactttgtgaaatattatG
CTATAAGTATACTGAATGATAGTAAGAAGcaattcaataggtaaaagtgt
gctattgagatttattaaccttGAGATGATGTAATATtgagttgaatata
catcacccAGTGTTAATAAATCCAacaaccaacttttacctatttaTTTA
ATACCTGCCTATTATAATAAAATATAGAATTAAGGTCGAAACATTAAACT
AGTAAAAATAAACAATGAAATAAATACATTTTCTGGTCATAGGAAAGTGT
TTGCTCTCTCTATTTGAATTAGTTGCTTCCCCATTTAACTTTCATTAACC
CAGAAGTGTGTGGTACCTTGAATACTGAAGCCTGATCTCAACTGAATCAA
GATAAGAAGATCAGTAGAAAATAAGACTTTGTTAACCACATGTgccaatt
taatttttatttccaaaGTAACATTTTTCTCTTCACAGACAATATCGATA
TCCAATGACAACATTCAAACTTGGTATAAAATACTATGTTAAGGTGAGTA
TATTATTAATAACAATAGATTGTTTAACAGTTCTGACATTAGTCGTAGTA
TAAGTAGATGGTTTTGAATCGAACTCCAGATTTCAAGATCTtgaagagag
aaaaaattacatagtttctaccccccctACATTCaggggggtcttgggtt
ttgatgaaccaaaagcaaaggggtgttaaaagtatgactttcctaagggg
ggttgccagttaagggggaatcttccttgaattatgcgaaatttcaattt
ttttcttttccaataaAGTTAAagggggtgtgaaattttaaattaatttc
ctaaaggggggttagcacttaaggtGGGGGTTCTCTTACCTAtggggggg
ggtcttgacccctctagaagcTATGGTTGATTCGACCTTACAGCTTATCA
CAACAATACCATAAcaactaaaatttacaaaaattattttgtttcagGAC
CGGCATGTACGGCAAAAACATGAAGATTACAATTCTATAGAACTTAAAAT
CGAACGTGAATTTATAGAAACACTTCAAGTTAGATGTTATCGTGAAAGAC
AATACAGTAAGCTTTCATGTTCTTTCGTTTCGTAAAtcctcaaagttctt
cttttcgcaCGGAATAACCATGCGGTTTTGAGccgtgacctttcaatttt
gaaactcaaagCCCCGCAGCAAGTCAGGgcgggatgggtggagcaaggaG
TCAACTAAGGCGGAGGGAAAAATTGCCGACTTTCATCACGTGACCAGtca
tttttctcataagcaattctgcataatttatcaaaattacaAGAACATGC
ACTAATATGTACtaaaaagtccattttccaTCTCAGACGAAAAACATTGC
TTTCACCACTAGTCTATTGTccacattttttcattttcctatgaattttt
caacttttttgatgaaaaaggcCAAATTTGTAAACTCGAAAGCAAAAATT
GGTtcccgcgaaaataagttcctttAAGGTATCACTAATTCTAACTGATT
GGTTGTACAGgatttccagatctggaaatatATACATTTTCATAGCCtag
gaaatgaaatttttttccctgTGATGAAAGATATATCATTTGATCTGTTT
ACtaattcttctttcatttttcttcttattaCAGAGGCAGAATTACGGCA
GCAAGGCCACATGTGGGGAAGTCGTGAACTACTTGAAAAGGCGGATAATT
ATCATCCTGAGTCATGTGACAAGCTGAAAGAATTACAAGGTCGTGTTCAT
GAttaaaagagaagagaaaagtGGCGGGTAGATGATTCTCTTTATCAATT
AAATTGAGATGTGAATTACCAAGTTATTGTCCTTCATTTTGGATTGGAAG
ATTGAAAGTCTCTAAATTTTCCCAAAGGAAATATGGATGTAATGGTTTTT
CATTACCGCCAACCAGAGTATCAATCGATATGTCTTCAAGATAGAAAAAa
gaatgttgttgttttttacaAGTTAATTAAGGTCACAGTTACATGAAAAT
GGGCACTTGTAACTAAGAAATTTAAGTAGTTCCAAAATGGTTTGAATGAC
AATGACTAAATTTATGATGCTGCCTTGACAGTTACAATTGGAAAAGTTTG
GAAATTGTTTTTCCTGGatatttagaccatgttcacgtgttactgttccg
tttcgttcCGATATGGTTTTCGTTatggatcgagtgtgttcatattggtt
tcggaacgtttcggtgtaagaaaacggagcagtcccattctgataaaaaa
agtggtgcgaaaccgtttcgatctgttttgctttgtaacgtcttgttttt
gacatttcaaattttgactttcaCACTTGTTTTGgaaccgtttcggaacg
gaacggaacggaacggaaccgtaacgtctgaacattgAAGACGAGaagaa
aatctggaaattttcattactggcttgttttaaattatcaaaatttatat
atataatGCTGAATTAACGTttatttttgatcttttttttttttttgtgt
ttagaaagtgattttgtttatatgattttcttttagttttgtgcgtatat
tgtattataatgaatttttttttaatacaacaTACAAATCGAATTTGATA
TTATTCAGAATTCCAAAAATTAGAGATACTAttattaaaaattgataaat
gatCAATATTAGTCGAAAAAGATAGAAGATAGAAATTAGAAATTAGATTC
G Coding sequence (CDS) from alignment at sc0000081_pilon:174351..182101+ >MSTRG.11252.2.p1 ID=MSTRG.11252.2.p1|Name=MSTRG.11252.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3132bp|location=Sequence derived from alignment at sc0000081_pilon:174351..182101+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTTCGGCGGAGGGTTTCCCGATGGCCGAGTTCATGTTCGAAGAGG
ACGTAGAGGTCAACAAACATATTTTCGTCAAAACACACATTCTCATAACA
ACAACCATCATCAAAACGAAaacGTATCTTCACTGTATCCTTTGGTGCAG
ATTCTACCTGTTCTTCTTATCATCCTCTTCTCGATGCTCAGTAGTTTCCT
TATTCCCGAACCAATATTCAGCTTTCAACCTACATCACAATATCGATATC
CAATGACAACATTCAAACTTGGTATAAAATACTATGTTAAGGACCGGCAT
GTACGGCAAAAACATGAAGATTACAATTCTATAGAACTTAAAATCGAACG
TGAATTTATAGAAACACTTCAAGTTAGATGTTATCGTGAAAGACAATACA
AGGCAGAATTACGGCAGCAAGGCCACATGTGGGGAAGTCGTGAACTACTT
GAAAAGGCGGATAATTATCATCCTGAGTCATGTGACAAGCTGAAAGAATT
ACAAGGTCGTGTTCATGAttaaATGTTTTTCGGCGGAGGGTTTCCCGATG
GCCGAGTTCATGTTCGAAGAGGACGTAGAGGTCAACAAACATATTTTCGT
CAAAACACACATTCTCATAACAACAACCATCATCAAAACGAAaacGTATC
TTCACTGTATCCTTTGGTGCAGATTCTACCTGTTCTTCTTATCATCCTCT
TCTCGATGCTCAGTAGTTTCCTTATTCCCGAACCAATATTCAGCTTTCAA
CCTACATCACAATATCGATATCCAATGACAACATTCAAACTTGGTATAAA
ATACTATGTTAAGGACCGGCATGTACGGCAAAAACATGAAGATTACAATT
CTATAGAACTTAAAATCGAACGTGAATTTATAGAAACACTTCAAGTTAGA
TGTTATCGTGAAAGACAATACAAGGCAGAATTACGGCAGCAAGGCCACAT
GTGGGGAAGTCGTGAACTACTTGAAAAGGCGGATAATTATCATCCTGAGT
CATGTGACAAGCTGAAAGAATTACAAGGTCGTGTTCATGAttaaATGTTT
TTCGGCGGAGGGTTTCCCGATGGCCGAGTTCATGTTCGAAGAGGACGTAG
AGGTCAACAAACATATTTTCGTCAAAACACACATTCTCATAACAACAACC
ATCATCAAAACGAAaacGTATCTTCACTGTATCCTTTGGTGCAGATTCTA
CCTGTTCTTCTTATCATCCTCTTCTCGATGCTCAGTAGTTTCCTTATTCC
CGAACCAATATTCAGCTTTCAACCTACATCACAATATCGATATCCAATGA
CAACATTCAAACTTGGTATAAAATACTATGTTAAGGACCGGCATGTACGG
CAAAAACATGAAGATTACAATTCTATAGAACTTAAAATCGAACGTGAATT
TATAGAAACACTTCAAGTTAGATGTTATCGTGAAAGACAATACAAGGCAG
AATTACGGCAGCAAGGCCACATGTGGGGAAGTCGTGAACTACTTGAAAAG
GCGGATAATTATCATCCTGAGTCATGTGACAAGCTGAAAGAATTACAAGG
TCGTGTTCATGAttaaATGTTTTTCGGCGGAGGGTTTCCCGATGGCCGAG
TTCATGTTCGAAGAGGACGTAGAGGTCAACAAACATATTTTCGTCAAAAC
ACACATTCTCATAACAACAACCATCATCAAAACGAAaacGTATCTTCACT
GTATCCTTTGGTGCAGATTCTACCTGTTCTTCTTATCATCCTCTTCTCGA
TGCTCAGTAGTTTCCTTATTCCCGAACCAATATTCAGCTTTCAACCTACA
TCACAATATCGATATCCAATGACAACATTCAAACTTGGTATAAAATACTA
TGTTAAGGACCGGCATGTACGGCAAAAACATGAAGATTACAATTCTATAG
AACTTAAAATCGAACGTGAATTTATAGAAACACTTCAAGTTAGATGTTAT
CGTGAAAGACAATACAAGGCAGAATTACGGCAGCAAGGCCACATGTGGGG
AAGTCGTGAACTACTTGAAAAGGCGGATAATTATCATCCTGAGTCATGTG
ACAAGCTGAAAGAATTACAAGGTCGTGTTCATGAttaaATGTTTTTCGGC
GGAGGGTTTCCCGATGGCCGAGTTCATGTTCGAAGAGGACGTAGAGGTCA
ACAAACATATTTTCGTCAAAACACACATTCTCATAACAACAACCATCATC
AAAACGAAaacGTATCTTCACTGTATCCTTTGGTGCAGATTCTACCTGTT
CTTCTTATCATCCTCTTCTCGATGCTCAGTAGTTTCCTTATTCCCGAACC
AATATTCAGCTTTCAACCTACATCACAATATCGATATCCAATGACAACAT
TCAAACTTGGTATAAAATACTATGTTAAGGACCGGCATGTACGGCAAAAA
CATGAAGATTACAATTCTATAGAACTTAAAATCGAACGTGAATTTATAGA
AACACTTCAAGTTAGATGTTATCGTGAAAGACAATACAAGGCAGAATTAC
GGCAGCAAGGCCACATGTGGGGAAGTCGTGAACTACTTGAAAAGGCGGAT
AATTATCATCCTGAGTCATGTGACAAGCTGAAAGAATTACAAGGTCGTGT
TCATGAttaaATGTTTTTCGGCGGAGGGTTTCCCGATGGCCGAGTTCATG
TTCGAAGAGGACGTAGAGGTCAACAAACATATTTTCGTCAAAACACACAT
TCTCATAACAACAACCATCATCAAAACGAAaacGTATCTTCACTGTATCC
TTTGGTGCAGATTCTACCTGTTCTTCTTATCATCCTCTTCTCGATGCTCA
GTAGTTTCCTTATTCCCGAACCAATATTCAGCTTTCAACCTACATCACAA
TATCGATATCCAATGACAACATTCAAACTTGGTATAAAATACTATGTTAA
GGACCGGCATGTACGGCAAAAACATGAAGATTACAATTCTATAGAACTTA
AAATCGAACGTGAATTTATAGAAACACTTCAAGTTAGATGTTATCGTGAA
AGACAATACAAGGCAGAATTACGGCAGCAAGGCCACATGTGGGGAAGTCG
TGAACTACTTGAAAAGGCGGATAATTATCATCCTGAGTCATGTGACAAGC
TGAAAGAATTACAAGGTCGTGTTCATGAttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:174351..182101 + |
|
