MSTRG.11175.1.p1 (mRNA) -

Overview
NameMSTRG.11175.1.p1
Unique NameMSTRG.11175.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000080_pilon:636877..638253+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11175.1.p1 ID=MSTRG.11175.1.p1|Name=MSTRG.11175.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1377bp|location=Sequence derived from alignment at sc0000080_pilon:636877..638253+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAAACCACACTGTAGAGTGTGTTCAAAATCTATCTTATTTGGATTCGTG
AGTTttgataaaaacatgaaatatatCTCCTTTACCTAATTTGATAGCTT
TAAAGTTATACTTCTTaacaaaataaatcagaaaCAGACTAGATTGGAta
gttgttttgaaaaatgaattccTTTATATTGGTTGTTTTGATGACAATAT
GTGTACATTGCTCCATCAGCCTCAAATTCACAGCTCAGGGTAAGATCATA
ACTACAcccccaacctcgttccctgcgcattatcagcttttttatgctta
ctgatagcgctagatgaTACCCTGacattggctggttttcgaacgcgcaa
gattacgtaattcaaaaacaaaacgtcagatttcattcgttcctgggttt
gaaaccattgcattgcagtgtaactttgtaacgtcagatttttttatgac
gtattgttttgagaagttccccctctgagagggggaactcgcatcagcca
acaccagggtattctctggcttcaatcagtaacgtaaataaagcctggga
tacacggggacgaggttgctaCACCCCCTGTTTATCAAATCAAGCAATGT
TCCATTTATAATAAATTTGGCCTAGAATACCCGTTTTACCAGACATATTC
TAAGATCAACACaacatttttagaaattgtTGTAAAACTGTTCGAAAAAG
TAGGAGTTTTTCGATCAGAAATAGAGATTTTGAGagattttgagccaaaa
aagtgttcccgtttcatatcagacacatatttcaccAGGCCAGTGCCTGt
ctattgttatgttatgctgatataagcaagtaatgtttttttctttctga
ccaatcctgttccacacccgtgtcaatccaatgtgaaaaagcttgtgaat
taaaattgatgagtaagcaaacgatatcactcttatttaaaagcaaaacc
tttaataatTCTTCAAACGAATTCTTTCTTTTAGATATCCAATCTTTAGG
ATGTTTTAAAGATAGTATGCTTCTTGAAATATCTGCTGAAAAGTTGGGAA
TTGAAAATCGAGAGTTTCAAATGCACTTTAATGGATATTTTGATGACCAA
AAATGCTCTATCGAATCTGGATCAAACATCAATGACTTTGATTATTATTT
CCTTGCTAATTTTTACAAAGATTGTGGTATTCAAGAATCTGTAATGGATA
CTAAAACTGTTTATAATCAAACTGTATGTATAACATTTGACAGAGATCTT
AAATCACAGATTGCCTTTGATTTTGAATGTGTTTTGAAGAAGAGATTGTA
ACTTCCATTAAACTAACTTTTCAGCAATTCCTGTATTATataataacacg
catgcgtaatttgtcgttcttttaaac

Coding sequence (CDS) from alignment at sc0000080_pilon:636877..638253+

>MSTRG.11175.1.p1 ID=MSTRG.11175.1.p1|Name=MSTRG.11175.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=786bp|location=Sequence derived from alignment at sc0000080_pilon:636877..638253+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaattccTTTATATTGGTTGTTTTGATGACAATATGTGTACATTGCTC
CATCAGCCTCAAATTCACAGCTCAGGATATCCAATCTTTAGGATGTTTTA
AAGATAGTATGCTTCTTGAAATATCTGCTGAAAAGTTGGGAATTGAAAAT
CGAGAGTTTCAAATGCACTTTAATGGATATTTTGATGACCAAAAATGCTC
TATCGAATCTGGATCAAACATCAATGACTTTGATTATTATTTCCTTGCTA
ATTTTTACAAAGATTGTGGTATTCAAGAATCTGTAATGGATACTAAAACT
GTTTATAATCAAACTGTATGTATAACATTTGACAGAGATCTTAAATCACA
GATTGCCTTTGATTTTGAATGTGTTTTGAAGAAGAGATTGTAAatgaatt
ccTTTATATTGGTTGTTTTGATGACAATATGTGTACATTGCTCCATCAGC
CTCAAATTCACAGCTCAGGATATCCAATCTTTAGGATGTTTTAAAGATAG
TATGCTTCTTGAAATATCTGCTGAAAAGTTGGGAATTGAAAATCGAGAGT
TTCAAATGCACTTTAATGGATATTTTGATGACCAAAAATGCTCTATCGAA
TCTGGATCAAACATCAATGACTTTGATTATTATTTCCTTGCTAATTTTTA
CAAAGATTGTGGTATTCAAGAATCTGTAATGGATACTAAAACTGTTTATA
ATCAAACTGTATGTATAACATTTGACAGAGATCTTAAATCACAGATTGCC
TTTGATTTTGAATGTGTTTTGAAGAAGAGATTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11175MSTRG.11175Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11175.1.p1.exon1MSTRG.11175.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11175.1.p1.exon2MSTRG.11175.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11175.1.p1MSTRG.11175.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080_pilongenomesc0000080_pilon:636877..638253 +