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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:632229..634354+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11174.1.p1 ID=MSTRG.11174.1.p1|Name=MSTRG.11174.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2126bp|location=Sequence derived from alignment at sc0000080_pilon:632229..634354+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTACACGTTGCAGTTTCACCAGAAAACCCCAAAGATCATATATTTGTGG
TTATAAAAGAGTCCAAAAGTAGATCTTATTGTTCACCGTTCTGTTATAAA
AGCCCATCAGATTTGGAGTAAAATCATTGCAGTTAGTTTTTGAGACCTTC
AAAGAAGATCTACAAAGAAACTCAACAATCATgaagaccactttcgtttt
cgttacTTTAGCTTTGGCATATGCCTCAGCTTTGACATTCGGCGATGCTG
GTAGGTTTAAATTGTTTGTGAGACAGTTACTCATGTtttaacccagctgg
cacacaacttCGTTTCAACcgtttaacgttagatgaacgttgaaacaacg
ttgtgtgtcagatAGGAATAGTCTTGTCATCATTATGCACTACAAATATT
TTAGTGTTATCTTATCTACTGTAAGGTAGAACTGTTCCTTATTCTCAGAT
TGATTGTTATGTAAATCAGTATCGCCAGACTTTTAGATCCtttttttCTT
AAGTTTACCTGTTAAATTCTACGCTACAAgagtttttacttttctttgat
gctaattttatcttattttagaTGGAAAATTGACCTGTGGATCGAACAGC
ATGACTATTACTTTAGACAAAGATAAATTCGATCAACACGGTCGTCAATT
CAGACTTCACTTCAAAGGAGCCACCGACCCAGCCTGTACTGTCAAAAGCG
ATGCCGGAGCTGATGGAGCCTTAACAATCACCTCAAATTACAATGCTTGT
GGAATCGTTCTTGCTGTCGCTGAAGAAGTCTCCTACAGCCAAACTGTCTT
GGTTACTTATGGAAAGACACCAAACAGCTTTGTTCAACGTGAAGAAGTCA
TCTCTTTCGAAGTCTCCTGCAACGTTGATGCTGCAGTTGCAGTTGGACTT
GCTGGAGCTGGACACGTCAATGTCACTAGCTTGGAAGAGCAAACTATTTC
CAAATGTAAGCAACCACAGCTTTTATCTATTACATTGAAACAAAAGGttt
ttagctcattttaaagtttaaaattgaacTTTTGATGTACAAGTATGGTT
TTAAATTGTATGCGAAGTTTTTAAGGGGAGTATGTCCTACTTTTCATCTT
ACAAACTTTTTGAACACTTTAGCCGAAGCCAGTGAATTTGACATCAAATT
GGTCAGAACCACCGACGGTTCTTTCAGCTCTGAAGATTCATCTTCACAAA
TGCGATTGGGAGATCAAATGTATTTCAAACTTGAATTGAACACCATCCGT
GATGACTTGAAAATCTCACCACAAACTTGTTACGCTACCAGCACCGCTGA
CTCcgctgaaaaatatttcctcgtTCAAGATGGGTAAGAATTTCAGCACA
CACCTAATTATCAATAATCTAATTGAGGATTTTTGATTTCTGTGCACAAT
CGAACGTTATTTGCCTGTCATTAGTTTTGATTACTAACCagattttaaag
taaaaaatgctaaaagctTTGAAAGAACTTTTCAGAATTGCCGAAAAATG
ATATGTTATCCGCGTCAAGATTACAAAGTAAATTTGTAGCATcgaatttt
caacaattttgagAAAGACGAactttatcttttatttttgagaagattaA
GATTAAAGATTAAGATTTTAACATTCTTCGTCACTTTTCTTTCAGATGCG
CAAATGCTGCTGACGGAACCGTCAAAGTTACCGAAACTGACGACAAGACA
GTTTACGAATGGGAAAATGAAGCTTTCCGATTTTTCGGAGCATCTGATGC
TGTTTACATCACATGTGAAGTCACCGTTTGCGAATCATCCAATGGCTCCA
CAGAATGCAACCGATGTGAAGCCACAACCCGTCGACGACGTGCTCTCTCT
AAATCTGCCACCTACCACTCCAAAGCTTACAGCAAAATCTTCACACTTGC
TTAGATTTGATGCTACTTTATAAAGCTTAGAATAACCCCATTTGTAATgc
gttttgaatatttttcaacttattcTAGGGCTAatattatgatttatttt
tcctTATAAATTTTCGTTGCAATAATTTTGTATTGcctttctatgtttgt
tagaATATCTTTTATTGATTGAAgattatcaaaaatgaaaatgataacat
CTTTACCATCCATTGCTTGATtccca Coding sequence (CDS) from alignment at sc0000080_pilon:632229..634354+ >MSTRG.11174.1.p1 ID=MSTRG.11174.1.p1|Name=MSTRG.11174.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3696bp|location=Sequence derived from alignment at sc0000080_pilon:632229..634354+ (Clytia hemisphaerica_ch_hm2_pilon)
ATgaagaccactttcgttttcgttacTTTAGCTTTGGCATATGCCTCAGC
TTTGACATTCGGCGATGCTGaTGGAAAATTGACCTGTGGATCGAACAGCA
TGACTATTACTTTAGACAAAGATAAATTCGATCAACACGGTCGTCAATTC
AGACTTCACTTCAAAGGAGCCACCGACCCAGCCTGTACTGTCAAAAGCGA
TGCCGGAGCTGATGGAGCCTTAACAATCACCTCAAATTACAATGCTTGTG
GAATCGTTCTTGCTGTCGCTGAAGAAGTCTCCTACAGCCAAACTGTCTTG
GTTACTTATGGAAAGACACCAAACAGCTTTGTTCAACGTGAAGAAGTCAT
CTCTTTCGAAGTCTCCTGCAACGTTGATGCTGCAGTTGCAGTTGGACTTG
CTGGAGCTGGACACGTCAATGTCACTAGCTTGGAAGAGCAAACTATTTCC
AAATCCGAAGCCAGTGAATTTGACATCAAATTGGTCAGAACCACCGACGG
TTCTTTCAGCTCTGAAGATTCATCTTCACAAATGCGATTGGGAGATCAAA
TGTATTTCAAACTTGAATTGAACACCATCCGTGATGACTTGAAAATCTCA
CCACAAACTTGTTACGCTACCAGCACCGCTGACTCcgctgaaaaatattt
cctcgtTCAAGATGGATGCGCAAATGCTGCTGACGGAACCGTCAAAGTTA
CCGAAACTGACGACAAGACAGTTTACGAATGGGAAAATGAAGCTTTCCGA
TTTTTCGGAGCATCTGATGCTGTTTACATCACATGTGAAGTCACCGTTTG
CGAATCATCCAATGGCTCCACAGAATGCAACCGATGTGAAGCCACAACCC
GTCGACGACGTGCTCTCTCTAAATCTGCCACCTACCACTCCAAAGCTTAC
AGCAAAATCTTCACACTTGCTTAGATgaagaccactttcgttttcgttac
TTTAGCTTTGGCATATGCCTCAGCTTTGACATTCGGCGATGCTGaTGGAA
AATTGACCTGTGGATCGAACAGCATGACTATTACTTTAGACAAAGATAAA
TTCGATCAACACGGTCGTCAATTCAGACTTCACTTCAAAGGAGCCACCGA
CCCAGCCTGTACTGTCAAAAGCGATGCCGGAGCTGATGGAGCCTTAACAA
TCACCTCAAATTACAATGCTTGTGGAATCGTTCTTGCTGTCGCTGAAGAA
GTCTCCTACAGCCAAACTGTCTTGGTTACTTATGGAAAGACACCAAACAG
CTTTGTTCAACGTGAAGAAGTCATCTCTTTCGAAGTCTCCTGCAACGTTG
ATGCTGCAGTTGCAGTTGGACTTGCTGGAGCTGGACACGTCAATGTCACT
AGCTTGGAAGAGCAAACTATTTCCAAATCCGAAGCCAGTGAATTTGACAT
CAAATTGGTCAGAACCACCGACGGTTCTTTCAGCTCTGAAGATTCATCTT
CACAAATGCGATTGGGAGATCAAATGTATTTCAAACTTGAATTGAACACC
ATCCGTGATGACTTGAAAATCTCACCACAAACTTGTTACGCTACCAGCAC
CGCTGACTCcgctgaaaaatatttcctcgtTCAAGATGGATGCGCAAATG
CTGCTGACGGAACCGTCAAAGTTACCGAAACTGACGACAAGACAGTTTAC
GAATGGGAAAATGAAGCTTTCCGATTTTTCGGAGCATCTGATGCTGTTTA
CATCACATGTGAAGTCACCGTTTGCGAATCATCCAATGGCTCCACAGAAT
GCAACCGATGTGAAGCCACAACCCGTCGACGACGTGCTCTCTCTAAATCT
GCCACCTACCACTCCAAAGCTTACAGCAAAATCTTCACACTTGCTTAGAT
gaagaccactttcgttttcgttacTTTAGCTTTGGCATATGCCTCAGCTT
TGACATTCGGCGATGCTGaTGGAAAATTGACCTGTGGATCGAACAGCATG
ACTATTACTTTAGACAAAGATAAATTCGATCAACACGGTCGTCAATTCAG
ACTTCACTTCAAAGGAGCCACCGACCCAGCCTGTACTGTCAAAAGCGATG
CCGGAGCTGATGGAGCCTTAACAATCACCTCAAATTACAATGCTTGTGGA
ATCGTTCTTGCTGTCGCTGAAGAAGTCTCCTACAGCCAAACTGTCTTGGT
TACTTATGGAAAGACACCAAACAGCTTTGTTCAACGTGAAGAAGTCATCT
CTTTCGAAGTCTCCTGCAACGTTGATGCTGCAGTTGCAGTTGGACTTGCT
GGAGCTGGACACGTCAATGTCACTAGCTTGGAAGAGCAAACTATTTCCAA
ATCCGAAGCCAGTGAATTTGACATCAAATTGGTCAGAACCACCGACGGTT
CTTTCAGCTCTGAAGATTCATCTTCACAAATGCGATTGGGAGATCAAATG
TATTTCAAACTTGAATTGAACACCATCCGTGATGACTTGAAAATCTCACC
ACAAACTTGTTACGCTACCAGCACCGCTGACTCcgctgaaaaatatttcc
tcgtTCAAGATGGATGCGCAAATGCTGCTGACGGAACCGTCAAAGTTACC
GAAACTGACGACAAGACAGTTTACGAATGGGAAAATGAAGCTTTCCGATT
TTTCGGAGCATCTGATGCTGTTTACATCACATGTGAAGTCACCGTTTGCG
AATCATCCAATGGCTCCACAGAATGCAACCGATGTGAAGCCACAACCCGT
CGACGACGTGCTCTCTCTAAATCTGCCACCTACCACTCCAAAGCTTACAG
CAAAATCTTCACACTTGCTTAGATgaagaccactttcgttttcgttacTT
TAGCTTTGGCATATGCCTCAGCTTTGACATTCGGCGATGCTGaTGGAAAA
TTGACCTGTGGATCGAACAGCATGACTATTACTTTAGACAAAGATAAATT
CGATCAACACGGTCGTCAATTCAGACTTCACTTCAAAGGAGCCACCGACC
CAGCCTGTACTGTCAAAAGCGATGCCGGAGCTGATGGAGCCTTAACAATC
ACCTCAAATTACAATGCTTGTGGAATCGTTCTTGCTGTCGCTGAAGAAGT
CTCCTACAGCCAAACTGTCTTGGTTACTTATGGAAAGACACCAAACAGCT
TTGTTCAACGTGAAGAAGTCATCTCTTTCGAAGTCTCCTGCAACGTTGAT
GCTGCAGTTGCAGTTGGACTTGCTGGAGCTGGACACGTCAATGTCACTAG
CTTGGAAGAGCAAACTATTTCCAAATCCGAAGCCAGTGAATTTGACATCA
AATTGGTCAGAACCACCGACGGTTCTTTCAGCTCTGAAGATTCATCTTCA
CAAATGCGATTGGGAGATCAAATGTATTTCAAACTTGAATTGAACACCAT
CCGTGATGACTTGAAAATCTCACCACAAACTTGTTACGCTACCAGCACCG
CTGACTCcgctgaaaaatatttcctcgtTCAAGATGGATGCGCAAATGCT
GCTGACGGAACCGTCAAAGTTACCGAAACTGACGACAAGACAGTTTACGA
ATGGGAAAATGAAGCTTTCCGATTTTTCGGAGCATCTGATGCTGTTTACA
TCACATGTGAAGTCACCGTTTGCGAATCATCCAATGGCTCCACAGAATGC
AACCGATGTGAAGCCACAACCCGTCGACGACGTGCTCTCTCTAAATCTGC
CACCTACCACTCCAAAGCTTACAGCAAAATCTTCACACTTGCTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:632229..634354 + |
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