MSTRG.11167.1.p1 (mRNA) -

Overview
NameMSTRG.11167.1.p1
Unique NameMSTRG.11167.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000080_pilon:594102..595789-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11167.1.p1 ID=MSTRG.11167.1.p1|Name=MSTRG.11167.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1688bp|location=Sequence derived from alignment at sc0000080_pilon:594102..595789- (Clytia hemisphaerica_ch_hm2_pilon)
AGATTGCAAACAAACAAAATACAATGGAAATATCTTCAATAAATGATCAC
TGTTGGAATAAAACAGATCACAATATATATCCAGAATGTATGGAATATTG
GGCATATCAAAGAGATGGTATTAACCATAAACCAAAAATTGTCTCTATAG
TCTTCCTTATAATCTTGATGATTCTCTGCATTGTTGGCAATGTCCTAGTC
CTATTGGCTTTCATCATGTATCGCCGACTCCGAGTCATAACACATTATTA
CATTGTATCCTTAGCTGTTAGTGATCTTATCGTAGGACTTATATCGATAC
CTATCTGGTTAAGTTTTGAACTGACTGGCTTTCAAAACTTACCTAACTGG
ATAGATGATATTCAAATGGTGCAAGTCATGGAATTCATTGATATTTTAAG
TTGCGTGTCATCTATTGTCAATCTAGCTGCTATCAGCATTGATCGTTTCT
TCGGGATAGTGACACCACTTAAACATAAAGCATGGATGACTGAGAAATCA
GCCATTTTATTCATCGTTTCATGCTGGATCTACAGTATGGTGATAGCTGG
TACTAAACTAGCTCCTCAGTTTGAAGACTACATCTTATTCAATTTTACAG
CTGGTTTTGCGCTCCCTCTTTTAATAATTTGCAGTTGCTACGCTTTTATA
TTCATCCAAGTGCGAAGACATGCGAATCGTAAAATCAGTAATCAAATATC
CAAACAATGGACACTGGCAAGGACAATTTCAGTTGTTGTTTCTTTTTTCC
TAATTTGCTGGACCCCGTTCTTTATAATCGTCTTGATGTACCAATATTGT
TTATCATGTACATTCTTCGAGCAGCCCTGGTTTGAGTACATCCCTGGAGT
GATCAAAACATTACATTATTTCAACAGTTGTTGTAACCCATTTGTATACG
GTGTATTTAATGTGAACTTTAGATCAGCTTATAAAGGTATCTTATATAAG
TGCCTTGGTAAAGAACTGAAACACACACCTTATGATGTATCTATTATTAT
TGGTAGCCGTAATGCATCTCTGAGGAATAGGTCGAATACTAGTGTCTCTA
TAATGAGCTACATGGAACCACAGTCGGGCGCCAATCAAGAGAATGATGAT
CTCCTGGTTACTGGTGATCGAGTCAGAACCTCATCCTTCAGCAATATCGC
TAATGCATTACCGAAACCGTTATCACCAAAACGATCTTTAGAAGATGAGC
CAAGAATGTTACTCAGACAGAAATTTCAAAAACAATTATCGTTGGAGAAT
TATTCACCTGTTCAAACGCCAACGTCTTCCTTTGAAGATGATACACTCCT
GTCGGAAACCGTCAGTTTATCTCTCTCTGACAGTATATCCTCTACAGAAT
CACCGAACCTTCTTTCTTGCACAGAAAACTCAACAAACACCGAAAACTGT
AATTGGCAATTCGACAATTTGACAAATAATTCTTTGTTAGACTTTGACAC
CTTGCTTGGTCAAGCTAAAGAATCCGACATCTAATAAAACAATAAGACAA
CAAATATTCAGGTGCACGCTTTCTTTATAAAACCCAGTTATTTTTGGTTG
AGGCTTTGGCTCGGTTCTATTTTTTTGCCGGGAAAATGCTCCTAATGTAA
TATGCAATTATTTGTTCTTAATTATTTCAAATATTCAAAATATTACTTTA
ATATTGGCTCATTAGGGGTTTAAAACCAGTAATATTTT

Coding sequence (CDS) from alignment at sc0000080_pilon:594102..595789-

>MSTRG.11167.1.p1 ID=MSTRG.11167.1.p1|Name=MSTRG.11167.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1461bp|location=Sequence derived from alignment at sc0000080_pilon:594102..595789- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAATATCTTCAATAAATGATCACTGTTGGAATAAAACAGATCACAA
TATATATCCAGAATGTATGGAATATTGGGCATATCAAAGAGATGGTATTA
ACCATAAACCAAAAATTGTCTCTATAGTCTTCCTTATAATCTTGATGATT
CTCTGCATTGTTGGCAATGTCCTAGTCCTATTGGCTTTCATCATGTATCG
CCGACTCCGAGTCATAACACATTATTACATTGTATCCTTAGCTGTTAGTG
ATCTTATCGTAGGACTTATATCGATACCTATCTGGTTAAGTTTTGAACTG
ACTGGCTTTCAAAACTTACCTAACTGGATAGATGATATTCAAATGGTGCA
AGTCATGGAATTCATTGATATTTTAAGTTGCGTGTCATCTATTGTCAATC
TAGCTGCTATCAGCATTGATCGTTTCTTCGGGATAGTGACACCACTTAAA
CATAAAGCATGGATGACTGAGAAATCAGCCATTTTATTCATCGTTTCATG
CTGGATCTACAGTATGGTGATAGCTGGTACTAAACTAGCTCCTCAGTTTG
AAGACTACATCTTATTCAATTTTACAGCTGGTTTTGCGCTCCCTCTTTTA
ATAATTTGCAGTTGCTACGCTTTTATATTCATCCAAGTGCGAAGACATGC
GAATCGTAAAATCAGTAATCAAATATCCAAACAATGGACACTGGCAAGGA
CAATTTCAGTTGTTGTTTCTTTTTTCCTAATTTGCTGGACCCCGTTCTTT
ATAATCGTCTTGATGTACCAATATTGTTTATCATGTACATTCTTCGAGCA
GCCCTGGTTTGAGTACATCCCTGGAGTGATCAAAACATTACATTATTTCA
ACAGTTGTTGTAACCCATTTGTATACGGTGTATTTAATGTGAACTTTAGA
TCAGCTTATAAAGGTATCTTATATAAGTGCCTTGGTAAAGAACTGAAACA
CACACCTTATGATGTATCTATTATTATTGGTAGCCGTAATGCATCTCTGA
GGAATAGGTCGAATACTAGTGTCTCTATAATGAGCTACATGGAACCACAG
TCGGGCGCCAATCAAGAGAATGATGATCTCCTGGTTACTGGTGATCGAGT
CAGAACCTCATCCTTCAGCAATATCGCTAATGCATTACCGAAACCGTTAT
CACCAAAACGATCTTTAGAAGATGAGCCAAGAATGTTACTCAGACAGAAA
TTTCAAAAACAATTATCGTTGGAGAATTATTCACCTGTTCAAACGCCAAC
GTCTTCCTTTGAAGATGATACACTCCTGTCGGAAACCGTCAGTTTATCTC
TCTCTGACAGTATATCCTCTACAGAATCACCGAACCTTCTTTCTTGCACA
GAAAACTCAACAAACACCGAAAACTGTAATTGGCAATTCGACAATTTGAC
AAATAATTCTTTGTTAGACTTTGACACCTTGCTTGGTCAAGCTAAAGAAT
CCGACATCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11167MSTRG.11167Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11167.1.p1.exon1MSTRG.11167.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11167.1.p1MSTRG.11167.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080_pilongenomesc0000080_pilon:594102..595789 -