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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:487371..489664+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11161.5.p1 ID=MSTRG.11161.5.p1|Name=MSTRG.11161.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2294bp|location=Sequence derived from alignment at sc0000080_pilon:487371..489664+ (Clytia hemisphaerica_ch_hm2_pilon)
aaggaaatacaaaagaaatgagTGAAGATGAAGATTATGAAGAGGATATT
TATACTGAAGAAGAACTTGAGGAACAGTGAGTTTTTTGTTGAATTATTTA
TTTATGACATCTTATACTGAATTGAtcaatttttggatgttttaaatgaa
agtttttgaaactgTTGAGAATAAAAACTTTGACTAGTTGGTTTGTtgct
ttcaaactttttttaaactggTTTCATTGTAATATCTACATTTTATTTAG
AGAACAAAGGGAGCAAGAGAAAGAACTTGAAGATTTCTTATACTCCAAAT
TTCACTATGCATCAAAAGTTGATGTTGAAGAAactggtatgttttttttt
taattgttatttgaagtaaatAACATTAAAAATAGGTTTAGTGTTATTGC
AAGTAGGTGAAAAGTACACTGGAAATCCTGTTGCCCGATATGAAAGGTAT
TTATCATGAGCTTGCACAAGGTAATGTATGATATACCAagataaaaattt
gttcagttGTTTCCCTGGTTTCCCAAACAcaccttaaaaatcaaaagata
gAATGAGATACaatcaagaatattttattcattttttggtGTCTTACCAT
TGATGTTTGCACATTATAAATTTTTCCTCTTTGTCATAGATCCCAACACA
GGAATTGACAAAAATAGAGATGATATCATAGACGAAAATGAAAACCCTCA
AACTGCTTACCCTGGTATTTATATGGACtttttttAACTATATTCTATCA
TTGTGAAGTAAAGAAGTGCTGCTTCAGGTACTACTTAGTGCTAAATGTAC
TTTCTTATGTTTGAAAATAGAGCTTAGACAACCCCACTTTTGTTCACTAC
GTAATTTATCCGCACCTCCAAAGAATATTGAATTAGCTAAATCAAAGAAG
CAAAATAACCCCCACATTTTTACTTTCCTTCAAAAGTTTCTATGACATTA
TTATATacatattatttttattgactATTAACTAGCTAATTTTGACCAGC
CACCAGGCATAGGTCCAGACCCCCTGGCAAAGTTGATTTGAGTCATTTCA
AGTTGAGTTTGCAGGAGAACATCAACTTATTTTGTCTATcatttattctc
aacttcagttgagttagaatctgagaatgtgtctgtctgtgtgtctgtct
gtgtgtgtgtatgtcccaaaactttggggcagcctggagaattgttcgat
ttggctgaaatttggcacacttgttccttgggtaaatatctgggggtgtt
tttttcatttttcaaaatttttgatttttggggccttgggacgagttttc
gcgaaacgaggctaaaactttggggcagcctggagacttcaaaaattgtt
cgatttggctgaaattttgcacacttgttccttgggtgaatatctgggtt
ttcttttttcatttttcaaaaattttgatttttggggcctggggacgagt
ttttcgcaaaaacgaggctaaaattttggggcagcctggagacttcaaaa
attgttcgatctggctgaaattttgcacacttgttccttgggtgaatatc
tggtggtgtttttttttcattttttgaaaattttgatatttggggcctgg
ggatgagtttttcgccaaaacgaggctaaaactttgtggcagcctggaga
ctttaaaaattgttcgattcggctaaaattttgcacacttgttccttggg
tgaatatctgggggtgctttttgcattttttaaaaatttagatttttggg
gcttggggacgagttttttgccaaaacgaggctaaagctttgaagtagcc
tacaggcctccaaaatggtcgaatttggttgaaatttggcacacttgttc
attgggtaaatatctgggggtctacaattgggcctatgaataatttgaag
ccactgaagttgagcccagtgcgttgcgcacgttcgactatcttgaaata
tctttttgtttttaatagaaATATCTGAATCAACAACATGGGGTATCTTA
GGAGCACACTCTACTATCAAAGAGAAAATTAATAGCCTGAGTGCTGTTGT
TGGTGAGACTCTTTTTCTTACCGTGGTTTACTTGTTTTTTGATTGTTCTG
AATAGGGATATTCTAATAATTGAATGGAACAAAACGTAGTAAAATCTAGT
TCTCTTGTATTCTCTAAATAGTCAGAATAGCCAGATTCAGAAATCTTTTA
GtaaataaaatgacattttcccTCTTTTAGGTGAGGATTCAGAGAATTGG
GATGTTAACGAACAAGACTTAAATGTAACTATTCTGGCCTTTAT Coding sequence (CDS) from alignment at sc0000080_pilon:487371..489664+ >MSTRG.11161.5.p1 ID=MSTRG.11161.5.p1|Name=MSTRG.11161.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1770bp|location=Sequence derived from alignment at sc0000080_pilon:487371..489664+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGATTATGAAGAGGATATTTATACTGAAGAAGAACTTGAGGAACAA
ACAAAGGGAGCAAGAGAAAGAACTTGAAGATTTCTTATACTCCAAATTTC
ACTATGCATCAAAAGTTGATGTTGAAGAAactgATCCCAACACAGGAATT
GACAAAAATAGAGATGATATCATAGACGAAAATGAAAACCCTCAAACTGC
TTACCCTGaaATATCTGAATCAACAACATGGGGTATCTTAGGAGCACACT
CTACTATCAAAGAGAAAATTAATAGCCTGAGTGCTGTTGTTGGTGAGGAT
TCAGAGAATTGGGATGTTAACGAACAAGACTTAAATGTAACTATTCTGGC
CTTTATGAAGATTATGAAGAGGATATTTATACTGAAGAAGAACTTGAGGA
ACAAACAAAGGGAGCAAGAGAAAGAACTTGAAGATTTCTTATACTCCAAA
TTTCACTATGCATCAAAAGTTGATGTTGAAGAAactgATCCCAACACAGG
AATTGACAAAAATAGAGATGATATCATAGACGAAAATGAAAACCCTCAAA
CTGCTTACCCTGaaATATCTGAATCAACAACATGGGGTATCTTAGGAGCA
CACTCTACTATCAAAGAGAAAATTAATAGCCTGAGTGCTGTTGTTGGTGA
GGATTCAGAGAATTGGGATGTTAACGAACAAGACTTAAATGTAACTATTC
TGGCCTTTATGAAGATTATGAAGAGGATATTTATACTGAAGAAGAACTTG
AGGAACAAACAAAGGGAGCAAGAGAAAGAACTTGAAGATTTCTTATACTC
CAAATTTCACTATGCATCAAAAGTTGATGTTGAAGAAactgATCCCAACA
CAGGAATTGACAAAAATAGAGATGATATCATAGACGAAAATGAAAACCCT
CAAACTGCTTACCCTGaaATATCTGAATCAACAACATGGGGTATCTTAGG
AGCACACTCTACTATCAAAGAGAAAATTAATAGCCTGAGTGCTGTTGTTG
GTGAGGATTCAGAGAATTGGGATGTTAACGAACAAGACTTAAATGTAACT
ATTCTGGCCTTTATGAAGATTATGAAGAGGATATTTATACTGAAGAAGAA
CTTGAGGAACAAACAAAGGGAGCAAGAGAAAGAACTTGAAGATTTCTTAT
ACTCCAAATTTCACTATGCATCAAAAGTTGATGTTGAAGAAactgATCCC
AACACAGGAATTGACAAAAATAGAGATGATATCATAGACGAAAATGAAAA
CCCTCAAACTGCTTACCCTGaaATATCTGAATCAACAACATGGGGTATCT
TAGGAGCACACTCTACTATCAAAGAGAAAATTAATAGCCTGAGTGCTGTT
GTTGGTGAGGATTCAGAGAATTGGGATGTTAACGAACAAGACTTAAATGT
AACTATTCTGGCCTTTATGAAGATTATGAAGAGGATATTTATACTGAAGA
AGAACTTGAGGAACAAACAAAGGGAGCAAGAGAAAGAACTTGAAGATTTC
TTATACTCCAAATTTCACTATGCATCAAAAGTTGATGTTGAAGAAactgA
TCCCAACACAGGAATTGACAAAAATAGAGATGATATCATAGACGAAAATG
AAAACCCTCAAACTGCTTACCCTGaaATATCTGAATCAACAACATGGGGT
ATCTTAGGAGCACACTCTACTATCAAAGAGAAAATTAATAGCCTGAGTGC
TGTTGTTGGTGAGGATTCAGAGAATTGGGATGTTAACGAACAAGACTTAA
ATGTAACTATTCTGGCCTTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:487371..489664 + |
|
