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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:273718..276553- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11150.1.p1 ID=MSTRG.11150.1.p1|Name=MSTRG.11150.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2836bp|location=Sequence derived from alignment at sc0000080_pilon:273718..276553- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTGGGTTCACATTACAAAAAGTATAAAAACAATGCCCTGTGAACTTCA
CTCTCCTCTTAATTTATATCAAATGCTCTTGCAAAAATATTTTTTTCTTT
CAAAAGATTCAGCTAAAATTGTGTTATGTTTTTTTGGATTTTAGAATTAT
ATTCAATTCTTAGCTTGTTTTTTAGATTTCCTATATTATGGATAGCTTCA
TCGCAGGATGTCTTGGTGGTTTGTATATTTTAATTTTTTCAAAGTTTTGC
TTTTCATCTGCCTTTAGTACGCAGGTTAAATTTTCTTATATGACGATTCA
TTTTGCTTAATATAGTGATATAGATATAGTGACTTGTCCTAGAAATTTAA
CAGTAATTGGTATTTGCTAAGGAGGTTAGGGAAATTTCTTTTGAGGGTAG
AACATGAGCATAAAGTTTATACAAAGTTTTGCTCTTCTTTCTTCATCAGG
CGGACTTGGTATGTTTGTTGGTCATCCTTTCGATACCATAAAGGTTTGTC
TATAGCATTCATCAGTAAACTACTAACAGCATTTTTTATAGAAACTCTGG
ACTTAGACCTGGGGCACAATACCTCTTATGACGAGCGTTATTAAAGATTG
CAATGTCAAATCCCCTTATATAAACAAAATGGCTGAATTGGATATCGGTT
TACTTGCATTAAGTGTTTGAATAAAGGCTCCTCAAATTTCTCGATATGCT
GTTGGAACAGTTCTCAACCGTATACACTGACCCCCTTCCAATCAATCCAA
ATTTCTCTTTTTTTACCAGGTAGCTCCAGTCGGTAAAGAATTTATATTCG
GTATAGCCTCAAACTTAAGCGATTATAGCTTATTAGGTAATCTGATTTTA
GGCGGTGTAAGTTATAGCTATTAGAGTAGGTATGGCGCTCTATCCTAAAA
ATAGCCTTTTCTAGTGTACCTCAAGTAGAAATGGGATAGACTTCTTAATT
CATGGCCAGTAGATCAACAAATTCAACCTTTCAAGTTCCTTGATAATTCC
CTTGCATTTTTTCTCCCTCATTCATTTTCAAGGTTCGCTTGCAATCAGAA
CATGTCCAATCCTCAAGTGGTTTACGTTACAAAGGTATTATCGATGGTAC
CATCAAAATCATTAAACAAGAAGGGGTATGAATGCCAGCTTGTAATTCTT
GATTTCGATGAACATTTGAGTCACCTCTTTCAAATCTTCTAAATTTCAAA
AACTTTCTGACTTTTGTTATGTTGTTATAGACGAATTTATTTGTTGAAAG
GCAATAGTTCGTTTTTCAAAATTAATGAGACGGGTGTCGACTACGAATTT
ACTCAACTCAAAATGTACAACTTCAAACGGTTATAACATTTGATAGAGAA
AGTATTTTTTGATTTTCTAACTAAACTACGCTAGACTCTGCAACGATTGA
CATAATATAAGACATTTGAAATTAGACTAAGGCCACTGACTTAGCATCTG
AAGGTAAAGTTTTCAATGACATTCCACACGAGTCAGTTTTTTCATTCCTG
TCGGTAGTCAAAATGTGTTTAAAAAGCACTCAATTTTATTTTTATTAAAA
GCAACCATTTATAAAAACAATTTTCCGTAAACGTGATGCAGATGTACGAA
AAAAGGAGATATTTCTCAGTCTTGAGAAATGGCCAAAAGTACAAAAAAAC
ATAAAAAACCTTGTAAAACCATGCACCCAGATACCTCATAGATAGAAGTA
TCGTTTAACTTCAAGTAGAATAAAGCAACAAATCAATTGGTAATGCAATG
AGGGAAAGGCTATTCGAACAAAAATCCCTTATGAAAATTTTTTGGGCTAA
CGGTAAAATTGTCTTTCAGCAATGATTGCTGAATAAGCATTTTTATTTAT
GCCTATGATCGTTGACGACCTTTATTAATCGTTTAAGTATTTTCGTTTTA
ACAGGTGACTGGTATCTACAAAGGAGCAACAGCACCCATTGTTGGAGTGT
CTGCACAAAACGCTCTCATGTTTGGTATCCAACGTTTCACTCGTCAATAT
TTCCAACCCAATCTTAAAGGGGAATTCATGGCTGGCATGGTGACTGGCAC
TTTAATGTCGGTCCTTGCGGCCCCAGTTGAAATGACAAAAACAAGGCTAC
AAGTGCAGAACATTGGTGAGAGGACTGTTAGAGCACAACGTAAATATAAG
GGACCCATTGATGTTCTACATAAAATGTACCTTGAGGAAGGTATCAGAGG
TCCTGGTCGTAGCTTTTGGATCACTTTAGTTCGAGATTCTCCTGGTTACG
GAATCTATTTTTCTTCTTATCCATGGTTATGTCAACTGATGTTTGGAGCT
GATCAACACATACACGATCTTAACGTATTACAATTATCGTTAGCCGGTAG
TTTAGCAGGTGCTATCTCATGGTTGGTTATCTACCCTATTGACGTCATCA
AAACACGCGTCTGTTCTGAGGGATTCGCACCCGCTGGAAAATATCGTAAT
TACGCGCATTGTTTTACGGAATGTTACCGTGAAGGTGGCGTAAAGACCTT
CTTTCGGGGACTATTTCCGACGTTGATACGTGCTCTTCCCGTAAACGGTG
TTACGTTTTCAACCGTATCTGTTGTAGAATCTTATTTTGCGAAACGTCAT
TCAGAAACTTGAATTTCTTTATCTTATTAAAATGATAGGTATATATAATT
ATAGGTAGATTTGGATGGACCTATATTTTAAAATTTTAACTGGGGTTCAA
TTTATTGGGAGTTTTAGATTACAGTATTTTTACTGCTTTGCTAAGAAAAT
ATTTTCATTGTTACACAAAATTTTCCACTTGTGGGTAGAACTAAATCGTA
TGATTTTTACATCCGTTGTTCCAAGTAAAAACAGAA Coding sequence (CDS) from alignment at sc0000080_pilon:273718..276553- >MSTRG.11150.1.p1 ID=MSTRG.11150.1.p1|Name=MSTRG.11150.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3504bp|location=Sequence derived from alignment at sc0000080_pilon:273718..276553- (Clytia hemisphaerica_ch_hm2_pilon)
GTGACTGGTATCTACAAAGGAGCAACAGCACCCATTGTTGGAGTGTCTGC
ACAAAACGCTCTCATGTTTGGTATCCAACGTTTCACTCGTCAATATTTCC
AACCCAATCTTAAAGGGGAATTCATGGCTGGCATGGTGACTGGCACTTTA
ATGTCGGTCCTTGCGGCCCCAGTTGAAATGACAAAAACAAGGCTACAAGT
GCAGAACATTGGTGAGAGGACTGTTAGAGCACAACGTAAATATAAGGGAC
CCATTGATGTTCTACATAAAATGTACCTTGAGGAAGGTATCAGAGGTCCT
GGTCGTAGCTTTTGGATCACTTTAGTTCGAGATTCTCCTGGTTACGGAAT
CTATTTTTCTTCTTATCCATGGTTATGTCAACTGATGTTTGGAGCTGATC
AACACATACACGATCTTAACGTATTACAATTATCGTTAGCCGGTAGTTTA
GCAGGTGCTATCTCATGGTTGGTTATCTACCCTATTGACGTCATCAAAAC
ACGCGTCTGTTCTGAGGGATTCGCACCCGCTGGAAAATATCGTAATTACG
CGCATTGTTTTACGGAATGTTACCGTGAAGGTGGCGTAAAGACCTTCTTT
CGGGGACTATTTCCGACGTTGATACGTGCTCTTCCCGTAAACGGTGTTAC
GTTTTCAACCGTATCTGTTGTAGAATCTTATTTTGCGAAACGTCATTCAG
AAACTTGAGTTCGCTTGCAATCAGAACATGTCCAATCCTCAAGTGGTTTA
CGTTACAAAGGTATTATCGATGGTACCATCAAAATCATTAAACAAGAAGG
GGCGGACTTGGTATGTTTGTTGGTCATCCTTTCGATACCATAAAGATGGA
TAGCTTCATCGCAGGATGTCTTGGTGGTGACTGGTATCTACAAAGGAGCA
ACAGCACCCATTGTTGGAGTGTCTGCACAAAACGCTCTCATGTTTGGTAT
CCAACGTTTCACTCGTCAATATTTCCAACCCAATCTTAAAGGGGAATTCA
TGGCTGGCATGGTGACTGGCACTTTAATGTCGGTCCTTGCGGCCCCAGTT
GAAATGACAAAAACAAGGCTACAAGTGCAGAACATTGGTGAGAGGACTGT
TAGAGCACAACGTAAATATAAGGGACCCATTGATGTTCTACATAAAATGT
ACCTTGAGGAAGGTATCAGAGGTCCTGGTCGTAGCTTTTGGATCACTTTA
GTTCGAGATTCTCCTGGTTACGGAATCTATTTTTCTTCTTATCCATGGTT
ATGTCAACTGATGTTTGGAGCTGATCAACACATACACGATCTTAACGTAT
TACAATTATCGTTAGCCGGTAGTTTAGCAGGTGCTATCTCATGGTTGGTT
ATCTACCCTATTGACGTCATCAAAACACGCGTCTGTTCTGAGGGATTCGC
ACCCGCTGGAAAATATCGTAATTACGCGCATTGTTTTACGGAATGTTACC
GTGAAGGTGGCGTAAAGACCTTCTTTCGGGGACTATTTCCGACGTTGATA
CGTGCTCTTCCCGTAAACGGTGTTACGTTTTCAACCGTATCTGTTGTAGA
ATCTTATTTTGCGAAACGTCATTCAGAAACTTGAGTTCGCTTGCAATCAG
AACATGTCCAATCCTCAAGTGGTTTACGTTACAAAGGTATTATCGATGGT
ACCATCAAAATCATTAAACAAGAAGGGGCGGACTTGGTATGTTTGTTGGT
CATCCTTTCGATACCATAAAGATGGATAGCTTCATCGCAGGATGTCTTGG
TGGTGACTGGTATCTACAAAGGAGCAACAGCACCCATTGTTGGAGTGTCT
GCACAAAACGCTCTCATGTTTGGTATCCAACGTTTCACTCGTCAATATTT
CCAACCCAATCTTAAAGGGGAATTCATGGCTGGCATGGTGACTGGCACTT
TAATGTCGGTCCTTGCGGCCCCAGTTGAAATGACAAAAACAAGGCTACAA
GTGCAGAACATTGGTGAGAGGACTGTTAGAGCACAACGTAAATATAAGGG
ACCCATTGATGTTCTACATAAAATGTACCTTGAGGAAGGTATCAGAGGTC
CTGGTCGTAGCTTTTGGATCACTTTAGTTCGAGATTCTCCTGGTTACGGA
ATCTATTTTTCTTCTTATCCATGGTTATGTCAACTGATGTTTGGAGCTGA
TCAACACATACACGATCTTAACGTATTACAATTATCGTTAGCCGGTAGTT
TAGCAGGTGCTATCTCATGGTTGGTTATCTACCCTATTGACGTCATCAAA
ACACGCGTCTGTTCTGAGGGATTCGCACCCGCTGGAAAATATCGTAATTA
CGCGCATTGTTTTACGGAATGTTACCGTGAAGGTGGCGTAAAGACCTTCT
TTCGGGGACTATTTCCGACGTTGATACGTGCTCTTCCCGTAAACGGTGTT
ACGTTTTCAACCGTATCTGTTGTAGAATCTTATTTTGCGAAACGTCATTC
AGAAACTTGAGTTCGCTTGCAATCAGAACATGTCCAATCCTCAAGTGGTT
TACGTTACAAAGGTATTATCGATGGTACCATCAAAATCATTAAACAAGAA
GGGGCGGACTTGGTATGTTTGTTGGTCATCCTTTCGATACCATAAAGATG
GATAGCTTCATCGCAGGATGTCTTGGTGGTGACTGGTATCTACAAAGGAG
CAACAGCACCCATTGTTGGAGTGTCTGCACAAAACGCTCTCATGTTTGGT
ATCCAACGTTTCACTCGTCAATATTTCCAACCCAATCTTAAAGGGGAATT
CATGGCTGGCATGGTGACTGGCACTTTAATGTCGGTCCTTGCGGCCCCAG
TTGAAATGACAAAAACAAGGCTACAAGTGCAGAACATTGGTGAGAGGACT
GTTAGAGCACAACGTAAATATAAGGGACCCATTGATGTTCTACATAAAAT
GTACCTTGAGGAAGGTATCAGAGGTCCTGGTCGTAGCTTTTGGATCACTT
TAGTTCGAGATTCTCCTGGTTACGGAATCTATTTTTCTTCTTATCCATGG
TTATGTCAACTGATGTTTGGAGCTGATCAACACATACACGATCTTAACGT
ATTACAATTATCGTTAGCCGGTAGTTTAGCAGGTGCTATCTCATGGTTGG
TTATCTACCCTATTGACGTCATCAAAACACGCGTCTGTTCTGAGGGATTC
GCACCCGCTGGAAAATATCGTAATTACGCGCATTGTTTTACGGAATGTTA
CCGTGAAGGTGGCGTAAAGACCTTCTTTCGGGGACTATTTCCGACGTTGA
TACGTGCTCTTCCCGTAAACGGTGTTACGTTTTCAACCGTATCTGTTGTA
GAATCTTATTTTGCGAAACGTCATTCAGAAACTTGAGTTCGCTTGCAATC
AGAACATGTCCAATCCTCAAGTGGTTTACGTTACAAAGGTATTATCGATG
GTACCATCAAAATCATTAAACAAGAAGGGGCGGACTTGGTATGTTTGTTG
GTCATCCTTTCGATACCATAAAGATGGATAGCTTCATCGCAGGATGTCTT
GGTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:273718..276553 - |
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