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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:11638..17449- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11132.3.p1 ID=MSTRG.11132.3.p1|Name=MSTRG.11132.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5812bp|location=Sequence derived from alignment at sc0000080_pilon:11638..17449- (Clytia hemisphaerica_ch_hm2_pilon)
ACAATTTAGATTTGAATAGATACAATTAAAAATACAAAGTAATGCAATGG
GTACGAAAGATTACGCAGAATATTACGAACGATTGACGTCATACACGAAT
TGGGCTGGTGATGTCACAATCTATGTTAAAGCTCTAGTCGAAGCTGGTTT
TGTTTATTCGGGTGAAAATGATACAGTGTTTTGTTACAAGTGTGGAGTCG
CGGCCAAAGGATGGAAAGAAGATGATGACCCCATTAAACGACATGAAGAT
TTGAACAAAACTTGTTATTTCCTATCCGAGCGGTCGCGCAACATCGTAGG
CGGACAAGAAATCCCATGCTCCTCTTTGGCAGATTTTGAAGAACAACAGA
CTGTTTACGATTGGGTGCCCGGGACTGGTGTTGTGAATCGGAAAGACGGT
AACGCGCACGGTTCGGGAGTCACTAAGAATGCAATGGATGATCAGAACGC
GACTGTGGGTACGGTGAACTTAGCTGGGTAAGTCTGCCTTCTTGTTGTTG
TTTTCGAAGCAGGATTGCCCTTCCCTTTGTAAAATACACTGTAGGTAGAT
CCACTTTATTTTGTTGCGCCCGTGTTTTACAAAAGCAGAAAATGTTTTTA
ATGAATTTGCGAAAATCAGCATCCATTTTAAGGTAAACAAAAAGATTCAC
GGTGTTGTTCATGAAGAAAAAAATTTGGGGTAGCATTCTTATGGAAAGGA
AATTCGACAACGGCTTCGTGTAACCGTGATACGTCACGTAATAATACGTG
GTCACCATTGAGAAACGTACGGGTGTCACGGTTAGCACGCACACGATAAA
AAGCCATTTTAACGTGCCTAAAGCTTTCTTGTTGCGTTTTTTACTTCGCT
CGTTGATAGCGTTCCTTGTAGAGCTGCTTATACGACGGAAGAAATAAAAC
ATAAGCACAAGTGGGAATACGCAATCAACGGCCACGAACGTTATAGTTTG
ATAATATAACATTATATGTTTGGCACTGTAGAAATTTTGTAATAAAAAAT
GGTGGTATGACAAAGAGATGAGACAAATGGCGAAACAAATTGTAAAATAT
GAGCGTTTTCTCCATTTTACGGCGAACGGTTTTGTGATGTTTCGATAGCG
CAGGAATGATAGTAAAACCAGAATCCATATTGAGATGGTCGGTAAAATAG
CGAAAGGTACCAAGCTTATGACATCATCTATTTCTTTGTATGTATAACAC
AACCATGCAGTTAGACAAATTACAAGATCAACGAAAGCCAGTTGTAGCAA
TAAGAAATGGTAGCTTAACATTTTGCGTAGTTTGTGAATGTTGGTTTTGA
AGTAGTATACCAAAATGGTGAAGTTTCCAAGGATACCAACAAACAACAAA
TATGGTAGATATTTGTTAAAAAACTTTCCGGCGTCTCTGAAGCCAGACAT
CTTTGATCTTCTTACTTGAAGACTTGTTATGAATTAGTAAGAGTGAAGAT
CTTTATCGGAAAGTGCTTCAGCGTGATGGTGAAATTGAAATTGAAAACGT
TGATATGATTTTGCAATTCCAATAAATATGATTATAAGGACATTGTGAAG
AATACACTATTCTTTTTCTCCTCTCTTTTCGGGAGATATTGGACACCATA
GTCATATTTAGGGTTTCTTTGATGTGAAAACGAAGAAATATTTCGTCCTG
AAATCTGCTTATTCAAATATTGAATTAATTTTGACAAATGTGAAATTTGA
TCATTTCCAGGATGCTTTTCGGCTATTGATTTTCAGCCGTCTGGTTATAC
ATTGAACTCGATAATTAGATCGTCTAGCTTAAAAAAAACTGTAAATTATT
TTACTTACTATTATAAGAAATATCCAACTAGCTTTCAAGGAGGATCTTGA
CGTACTGTATAACCTACTTGTAAGGCTTTGATCATTTTTTCAAATGGGAA
ATTCCATCAAAATGACAACTATTCGAGTTATTTTTCGACCTGCCCGACCT
GCTCCTATAGCCAATGTCCGTACATCCGTCCGTCCGTTCGTTCGTTCGTT
CGTTCGTCTGTTACCAGCTTTACTCGGGATTGGCTCTAGCTTTTTTCTAA
TTCTTTACACAAAGATGCGAAATGGTGATAACCAAAATGGAACGGAGCCC
GATTTTCGAGAAAAATTATTTTGGACAAATTTATGCCGAAAACTGCTTAA
AATAGGGTTTTTTGGACTTTGTGCCAAATTGCTTCATTACCTTAAAGGAA
GAAATTTTGGCGGAAAGAAAATTTGGCGGATTTGGCTGAAATCCGCCAAA
TTAAATTCCCGCCAAAATTTCTTTTTTCCGCCATCCGCCAAATTAAATTC
CCGCCAAATTAAACATTTTGAAAATATGATCTCTTTTAAAGGTGTTTTTG
CTATTTTTTCGCTGTTTTGACGCCATCTTAAGGTTAATTTTTTTAAGCAA
TCGCCAAATTAAATTCCCGCCAAATTTAGTTTTTTCGTCCATCCGCCAAA
TTAAATTCCCTCTGAAAAAACTTTTTTTAAATTAAACATTTTGAAAATAT
GATCTCTTTTAAGGTGTTTTTGCTATTTTTTCGCTGTTTTGACGCCATCT
TAAGGTTAATTTTTTAAATTTTAAGCGACCGCCAAATTAAATTCCCGCCA
AATTTAGTTTTTTCGTCCATCCGCCAAATTAAATTCCCTCTGAAAAAACT
TTTTTTAAATTAAACATTTTGAAAATATGATCTCTTTTAAGGTGTTTTTG
CTATTTTTTCGCTGTTTTGACGCCATCTTAAGGTTAATTTTTTTAAGCGA
CCGCCAAATTAAATTCCCGCCAAATTTAGTTTTTTCGTCCATCCACCAAA
TTAAATTCCCGCCAAAATTTCTTCCTTTAAGGTAGTTTTTTTTCTGATTT
TTGGCAAGAGATAGAGGACAAGATTCTCTAAAGAGTCGCTGAAGCCATTT
CTTCCGGAAAATTCTTTATGGCCGTAAATATCAGATTTTCTTATTTGCGG
AAATTCCCTTTTTTCTCAAATTTGGTTACATTTTCTCTGCACTATTTTAA
GGGTCAGTTTTCAAAGGCCTAATTTTGGGCCACATAAACAGTTATTTTTT
TAATTCAAGTGCCTAGTCTTTTTGCTGATTAGTCGTGGTTACTTTTGTAA
ATCCACTAGTGATATTATTGGCCTATTGTTTTCTCAGGTATATAGATTTT
ATATGCAAGTATAGAAGCTTAAATTGTGCTTATTTTGCAGAAATAGCCTA
CTTTAATCGGATTAACTAAATGAAGTTAGTAGCTTACCGTAAAGTTTGCA
CACTGCTTTCTAACTTACACATCGTGTTTCGCAATACAGAAACACTTCTC
AAAAAAGTACTGAAATCAGAACTAATGACATCATTTGTTTACATTTGGTC
ACAAGACACGAGCGATTATGATTTCGCATGCAGTCTTTTGAATGCAACTC
ATTGTAAAATGTTTATAAAACAGAGTTATAGCAAAGTTTGAAATAAATTC
CTTGTAAGTTTTCTAGTAAACGTAAATCGAGAAAAGGAATAAGAGAAACA
ACACAAGAAATAACATCACTGAATTCAACATGTTCAAGAAAAGTATTCAT
TCGTCATCTAAACCGAAAACTACCAGATTGACAACAACAACTGCTGCAGC
TGCTACTGCTAGTACAACGAATTCACCCGCTATAAAGTAAGTAACTTTTG
AATTTTGCGCAATTATGCGTGAGAGAGTTTATGTTCAAACTTAATTTTGA
ATTTATCTGATTTGATTCTCGGTAAAGTAACCGACAAGTTTTCGTACTTG
ACAAAACGAGATGATATCTGATCAACATGATATTCATTACGTAATGTTTT
CTAGGGAAGCACCCCACTTTTTGCCATTAGTGGCAAATTTTAAAGAAATT
TTTCTTTAGCTAATATTTGCCACTACTGGCAAAAGCAGGGTGTTCCCGTA
GAAAGCATATTGTGTCATGAATATAAAAAACATAGAGGTTTCTTGATTTT
GTTTAGGCTGCACGCATCCCCTCTGATATGATTTGATAAAACAAAATAAA
TTCGTGGGATGCGTGCAGCCTAGATTTTGTTCTGTTCGTTAGTTGAACAA
TCTGAGCTTTAGAATCAATAACTGATATTTTACTACAAATAACTACTATT
CTCTTTTTACGTCAGGATAACCTTTGTCTCGGCAGTATCAAGTGGCAACT
TACAACAAGTCAAATCAGCCTACAACAAATCCATTAACATCAACAAACAA
CATCAAGTTGGTCAAACGCTTTTATACCATGCTGCATTCAAAGGATACAC
AGATATCGTACAATTTCTATTGGACAATGGCGCCGACATGATGATTTGTG
ACGATAACGGAAATTTCCCGATTCACACGGCGTGTAATAAAGGACAAGTC
CGATGTGTCGAACTTTTGATCAAGAAGGGTGCGAACGTTGATTTATTGAA
CAGAAAGAATCTAACACCGATGCATTTTGCTGTATGCGGAGACCAATACG
AAACCGCAAAATTGCTCCTCAATTACGGCGCCAATGTGAATTCGCGAAAC
AAAAATAATGTTGGATATTTGTATTTTGCCAGTTCCCATGGCAACCTACA
AATGGTGGAATTATTGTTACAATGTGGCGCCATTATTGATATTCCAGGGC
GTACTGCTTCTAATTCCGCCCTACATGTGGCGTCAACGAAAGGACATTAT
AAAGTCGTTTCTTGTCTCATTAACCATGGTGCTTCGTTGAGTCTTAAAGG
CGAAAAATTTTCAGCCTTGTTCAGCGCTATTCATCATAAACGGTTGGAAG
CTGTTGACGTTTTACTGGATGCGGGTGCAGATCCTAATTTCGTGATATCT
GGAGTGGAACAGCGACCTCTTCACCATTTGGCATTCAAATATATCAATGA
TTTAGATTATATGTCACGCTTGGTTGACCACGGAGCCGACGTCAACGTCG
TTGAGGAGAACGGTTTAACGCCTTTACACTTTGCATCCTCTGCTGATAAT
CTGAGAGCGGCCGAATACCTTTTGTCACACGGCGCTGATGCAAATATTAA
GTCGAAAAAAGGTTCGACAGCTTTGACCGTTGCCAAAACTGAGGAGATGA
AAATGTTGTTACGAAAACACACTGATGACCAATCTTCAGCTTCTTCGGCT
GTTGAATGTAAATACGCTGATCCTTTGAACCCTACAAACTTCGCCTTTGC
TCCGCCTCAAAGTTTGCCTTCTGGACCTTTCCAAACTGCCGCTACTGCTC
TACCGCAAAATGTTGCCAGTGCACCTCCTCTTGAAGTGCTGGACACCACC
GATGATCACATTCAAAAACCAATCCCTTGCTCATTCTCAAAACCACTTGA
AGCACTGTTGCAAGAAAAAGAAGAAGAACTCCTTCTGTTGAAAGAAAAAG
CAGTCAACGTCGAATCTGAAATCGATGATTTAAAGAAACGTATAGAAGCG
CAACGAAATCGAGATTTGGAAGCTACAACTGGTTTCTCATTACCTACAAA
TCATTTAGAATGTCCTATTTGCTTAGAAATTCCATATGCGCCAACCAAAA
TCTTTCAGTGTGAACAGGGCCATATTTTTTGTGAAGTATGCAAAGACAAA
GGATTGCAATATTGTCCGGAATGCAGAGTTGAGTTGGATGGGAAATTTAT
ACGGAACCGAAGATTGGAAGATGTGATCCAAGGGATGACGAGTAAACCAG
AGTGAAAAAAAAACTTCATCATATTTTTTTTTATTTTTTTTATTTTTTGC
TTCATTCATTGTAAATATATCTATGAATAATCAATCATTCTCAAATTAAA
TTTTAAATGAATGTTTTAATTAAAATTTCATTCGAGTATTTGGCTCGTCT
AGAAAATTGTTG Coding sequence (CDS) from alignment at sc0000080_pilon:11638..17449- >MSTRG.11132.3.p1 ID=MSTRG.11132.3.p1|Name=MSTRG.11132.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3942bp|location=Sequence derived from alignment at sc0000080_pilon:11638..17449- (Clytia hemisphaerica_ch_hm2_pilon)
GATAACCTTTGTCTCGGCAGTATCAAGTGGCAACTTACAACAAGTCAAAT
CAGCCTACAACAAATCCATTAACATCAACAAACAACATCAAGTTGGTCAA
ACGCTTTTATACCATGCTGCATTCAAAGGATACACAGATATCGTACAATT
TCTATTGGACAATGGCGCCGACATGATGATTTGTGACGATAACGGAAATT
TCCCGATTCACACGGCGTGTAATAAAGGACAAGTCCGATGTGTCGAACTT
TTGATCAAGAAGGGTGCGAACGTTGATTTATTGAACAGAAAGAATCTAAC
ACCGATGCATTTTGCTGTATGCGGAGACCAATACGAAACCGCAAAATTGC
TCCTCAATTACGGCGCCAATGTGAATTCGCGAAACAAAAATAATGTTGGA
TATTTGTATTTTGCCAGTTCCCATGGCAACCTACAAATGGTGGAATTATT
GTTACAATGTGGCGCCATTATTGATATTCCAGGGCGTACTGCTTCTAATT
CCGCCCTACATGTGGCGTCAACGAAAGGACATTATAAAGTCGTTTCTTGT
CTCATTAACCATGGTGCTTCGTTGAGTCTTAAAGGCGAAAAATTTTCAGC
CTTGTTCAGCGCTATTCATCATAAACGGTTGGAAGCTGTTGACGTTTTAC
TGGATGCGGGTGCAGATCCTAATTTCGTGATATCTGGAGTGGAACAGCGA
CCTCTTCACCATTTGGCATTCAAATATATCAATGATTTAGATTATATGTC
ACGCTTGGTTGACCACGGAGCCGACGTCAACGTCGTTGAGGAGAACGGTT
TAACGCCTTTACACTTTGCATCCTCTGCTGATAATCTGAGAGCGGCCGAA
TACCTTTTGTCACACGGCGCTGATGCAAATATTAAGTCGAAAAAAGGTTC
GACAGCTTTGACCGTTGCCAAAACTGAGGAGATGAAAATGTTGTTACGAA
AACACACTGATGACCAATCTTCAGCTTCTTCGGCTGTTGAATGTAAATAC
GCTGATCCTTTGAACCCTACAAACTTCGCCTTTGCTCCGCCTCAAAGTTT
GCCTTCTGGACCTTTCCAAACTGCCGCTACTGCTCTACCGCAAAATGTTG
CCAGTGCACCTCCTCTTGAAGTGCTGGACACCACCGATGATCACATTCAA
AAACCAATCCCTTGCTCATTCTCAAAACCACTTGAAGCACTGTTGCAAGA
AAAAGAAGAAGAACTCCTTCTGTTGAAAGAAAAAGCAGTCAACGTCGAAT
CTGAAATCGATGATTTAAAGAAACGTATAGAAGCGCAACGAAATCGAGAT
TTGGAAGCTACAACTGGTTTCTCATTACCTACAAATCATTTAGAATGTCC
TATTTGCTTAGAAATTCCATATGCGCCAACCAAAATCTTTCAGTGTGAAC
AGGGCCATATTTTTTGTGAAGTATGCAAAGACAAAGGATTGCAATATTGT
CCGGAATGCAGAGTTGAGTTGGATGGGAAATTTATACGGAACCGAAGATT
GGAAGATGTGATCCAAGGGATGACGAGTAAACCAGAGTGAATGGGTACGA
AAGATTACGCAGAATATTACGAACGATTGACGTCATACACGAATTGGGCT
GGTGATGTCACAATCTATGTTAAAGCTCTAGTCGAAGCTGGTTTTGTTTA
TTCGGGTGAAAATGATACAGTGTTTTGTTACAAGTGTGGAGTCGCGGCCA
AAGGATGGAAAGAAGATGATGACCCCATTAAACGACATGAAGATTTGAAC
AAAACTTGTTATTTCCTATCCGAGCGGTCGCGCAACATCGTAGGCGGACA
AGAAATCCCATGCTCCTCTTTGGCAGATTTTGAAGAACAACAGACTGTTT
ACGATTGGGTGCCCGGGACTGGTGTTGTGAATCGGAAAGACGGTAACGCG
CACGGTTCGGGAGTCACTAAGAATGCAATGGATGATCAGAACGCGACTGT
GGGTACGGTGAACTTAGCTGGGATAACCTTTGTCTCGGCAGTATCAAGTG
GCAACTTACAACAAGTCAAATCAGCCTACAACAAATCCATTAACATCAAC
AAACAACATCAAGTTGGTCAAACGCTTTTATACCATGCTGCATTCAAAGG
ATACACAGATATCGTACAATTTCTATTGGACAATGGCGCCGACATGATGA
TTTGTGACGATAACGGAAATTTCCCGATTCACACGGCGTGTAATAAAGGA
CAAGTCCGATGTGTCGAACTTTTGATCAAGAAGGGTGCGAACGTTGATTT
ATTGAACAGAAAGAATCTAACACCGATGCATTTTGCTGTATGCGGAGACC
AATACGAAACCGCAAAATTGCTCCTCAATTACGGCGCCAATGTGAATTCG
CGAAACAAAAATAATGTTGGATATTTGTATTTTGCCAGTTCCCATGGCAA
CCTACAAATGGTGGAATTATTGTTACAATGTGGCGCCATTATTGATATTC
CAGGGCGTACTGCTTCTAATTCCGCCCTACATGTGGCGTCAACGAAAGGA
CATTATAAAGTCGTTTCTTGTCTCATTAACCATGGTGCTTCGTTGAGTCT
TAAAGGCGAAAAATTTTCAGCCTTGTTCAGCGCTATTCATCATAAACGGT
TGGAAGCTGTTGACGTTTTACTGGATGCGGGTGCAGATCCTAATTTCGTG
ATATCTGGAGTGGAACAGCGACCTCTTCACCATTTGGCATTCAAATATAT
CAATGATTTAGATTATATGTCACGCTTGGTTGACCACGGAGCCGACGTCA
ACGTCGTTGAGGAGAACGGTTTAACGCCTTTACACTTTGCATCCTCTGCT
GATAATCTGAGAGCGGCCGAATACCTTTTGTCACACGGCGCTGATGCAAA
TATTAAGTCGAAAAAAGGTTCGACAGCTTTGACCGTTGCCAAAACTGAGG
AGATGAAAATGTTGTTACGAAAACACACTGATGACCAATCTTCAGCTTCT
TCGGCTGTTGAATGTAAATACGCTGATCCTTTGAACCCTACAAACTTCGC
CTTTGCTCCGCCTCAAAGTTTGCCTTCTGGACCTTTCCAAACTGCCGCTA
CTGCTCTACCGCAAAATGTTGCCAGTGCACCTCCTCTTGAAGTGCTGGAC
ACCACCGATGATCACATTCAAAAACCAATCCCTTGCTCATTCTCAAAACC
ACTTGAAGCACTGTTGCAAGAAAAAGAAGAAGAACTCCTTCTGTTGAAAG
AAAAAGCAGTCAACGTCGAATCTGAAATCGATGATTTAAAGAAACGTATA
GAAGCGCAACGAAATCGAGATTTGGAAGCTACAACTGGTTTCTCATTACC
TACAAATCATTTAGAATGTCCTATTTGCTTAGAAATTCCATATGCGCCAA
CCAAAATCTTTCAGTGTGAACAGGGCCATATTTTTTGTGAAGTATGCAAA
GACAAAGGATTGCAATATTGTCCGGAATGCAGAGTTGAGTTGGATGGGAA
ATTTATACGGAACCGAAGATTGGAAGATGTGATCCAAGGGATGACGAGTA
AACCAGAGTGAATGGGTACGAAAGATTACGCAGAATATTACGAACGATTG
ACGTCATACACGAATTGGGCTGGTGATGTCACAATCTATGTTAAAGCTCT
AGTCGAAGCTGGTTTTGTTTATTCGGGTGAAAATGATACAGTGTTTTGTT
ACAAGTGTGGAGTCGCGGCCAAAGGATGGAAAGAAGATGATGACCCCATT
AAACGACATGAAGATTTGAACAAAACTTGTTATTTCCTATCCGAGCGGTC
GCGCAACATCGTAGGCGGACAAGAAATCCCATGCTCCTCTTTGGCAGATT
TTGAAGAACAACAGACTGTTTACGATTGGGTGCCCGGGACTGGTGTTGTG
AATCGGAAAGACGGTAACGCGCACGGTTCGGGAGTCACTAAGAATGCAAT
GGATGATCAGAACGCGACTGTGGGTACGGTGAACTTAGCTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:11638..17449 - |
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