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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:808192..814449- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11098.7.p2 ID=MSTRG.11098.7.p2|Name=MSTRG.11098.7.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6258bp|location=Sequence derived from alignment at sc0000079_pilon:808192..814449- (Clytia hemisphaerica_ch_hm2_pilon)
GTGAATGTATTTGTAAAAATTTATATTGAAGTATATTTTCAATATAAGAT
CTTTATTCTTTCTTCCTTTTATCATGATGTATTTTTCTATTGCATCTCCC
CTTTGAATTCTCCTCAGGGCTTTAACACCAGCATTCCAGGTATAAAAACA
TATCCCTTTTTCATAAAGTTCATGTTTTATAAAACAGATATTCATTTTGT
TTCCTGTACAATGATTATGTTTAAGGTTTAAAATAATGACTGGAACACAA
AGAACATTCAGAAAGAAAGTTGTCAAAGTTAAAAGCACAAAAATAAGAAA
TGGTAGAAAAAGGACTACTTATGTCCAACCTTTCATGAGCAGTTCATCTC
AATCAAAGTACTTGAAAAATGAGTCTTTCAGTCCTTGTATATCTGGGGAT
GAGGATGAGAGCTCAAAAGAGGATAACTTTGTCACTGATTCAGTAAACAA
AACAAACGATGATTCAAAAAGGTCAAAGTACCAGACAATGAAGGAAAAGG
AGCTTGGGGCATGGGATACCTTCTCACCTGAAGTGATAAGGAAGTACGCA
GAGAAGTTCGATGAAATGCTACCCACAATATGTGTTATCTGTGAAACAAA
ATTACTTGAAAATTGTGTATGGTGCAAAACATGTGGGCCAAGAACCACAT
ATTGCAGTGGATGTGCTGTTAAGATCCATAAGCACATGCCTTTTCATTGT
CTGTATGAAATAAATGTAAGTATTCTAATCCTAGAGTAACTGGTAATAGG
GTATACTCTTGGGTCTCAAATGAAATAAACATACAGGTACATTTAAAATA
AATTAAGATTATTTTTGAGGTCTTTATGATAACCCAACTTGATTCTTTTT
TTGTGAAGCTGGACCCTTGCCTGATTACATATTGAGATAATTTTTTGCTC
AGGGCTGAAGTGGTCAAAGGGATTTCATATTTTGATACCAACGGATGGAT
TTCTGTTTCAGGGCTGGAGCCTTAGCAGCTTAGGTTGCTTATGAAAGTAA
TGTATAGAAAAAGCGTTCTCTTCTAGAAAGCATGGAATGTACAGGAAAGT
AGTTGCAGATTTCTTTCCTGTCATTTGCGCTAGATTCAGGGTTTAGTGGT
CTTTTGAAGAAGTGACAATAATCAGACTGGCCATCAAAAAACTTTTGATT
TATATAATTTCTTCCTAATCTATTTGAAGGATGATGGGTTTCACGAATTT
CAAGTCAATTATGAGCTGAAAAGCAAACATACAAGCCAATGTCTGTATGC
CAAGCCTAGATTATTGACAGTAATTTCAGAAACAGGTATTAAAAATCCTT
TACATGTCATTACTTTAAAGGATCACATGGTGTCATGCAAGTTTTTTGGG
TCCCCCATCCGGTGTTGAAAACCCCCATCTGGCTTTCCTTCCCCATTACT
GTTTGATTTCTGGTCTCTCGATCTGAAAATTACTTATATAAAGTTGTTGG
TTCACATCAAAATGAATTATAAATGATAAATTCATGCAAAAACATTATAC
AAAAAAAGATATTCATGTAATCAATAAGTAAGATTGATACCTTTCTTTGA
TGTTTACCTTGGAAAAAAAATTCATCCCCTCCCAGACCAACAATGTGATA
TTAATTTATTCTCTGATAAAAACAGGCTACCTGATAATCTAATTAAATTG
TTCATGCAAATATCCTTTTGAAAGTTTTAAAACTTTGGGTCTATGGTTCT
TTTTTTAAACGTTATGATTTTTCATAGTTACAGAATTTCAGCATTATGTT
CTATAAGACATAGATACAAATAGGGGGGAAAGATAAAATCTATATATTTG
AATAATTTTTTTTCAAAATTACGTCATCTTTTCTAGGACTACATCATCAG
TGCTCTATCTATTTTTGTGAATGTGAAAGTGATTTGGAAACACTACTTCG
TCTTGACTTGTGGCCTGTGACTCCAATCAAACCAAATACGGTGGTGTCTA
TAGATCTCCTACACCTTTTCATCTCGTTGCAGTTGGAGGGGAAGATATCT
TTTCATTCTTTTTGTGATGGTCTAGCGTGGAAAAAAGGAATGGGAAACAC
TGTCTTGGTAAATATTTTCATGATAAACTAGTATTAGTTGCCCTTCGTGG
AAACAATTTTTTAGGTGTCTAAAGGATACTGAATATTCGGAGCATGCCAC
TTAAAATATATGTTATTATTATTACTTTGCTTGATTTATTTTTTAATAAA
TAGGCTCTTACACTCGTTGAGATATTTTCAATTATTCTTGTTTTCTGGCG
CTTGAGTTTTTATTTTTATTTTTAGAGAAGATATCTAAATCGTTTGGAGA
AGACTGACACTATCGATCAGTTTAGGAACTTTCGGAGGCAACTTCTTAAC
CTCAGAAGCATTTGTGAAGACTTCACTGGACTAGAAGAGTGTGCTGCTTG
TCCCAAAGTAAGAATTACTTTTACACATGCTTTGATCAGAGTGGAACCAC
TAAGGTGCATAACATTGTTGACACTAAGGAACACATTTTAATAAGCAAAC
CTATTATTTTCTGGCTCATTGCTAAGGTCGCTAAGATTTTTGTCAAACTC
AAGGTTGCAGTTGTTGCTCAATAGGCCACTAAGGTTTTCTCTTGTTCATG
TTGTGAACATCTGTTGTTGAAGAAGAAGTTGCTTTGCTTATCAAAGGCTC
AGAGTACAGCAAATTTATGAGCAAGGCCAACCTTAGCAACTAGCTTGCTT
TAAGTAAAATAATGTGTATTAAAGAAGGAATATCAACTTTCGTTTAGGAA
GACGGCAGTGTGTTCTATTGTTTAGATGCAAACTTTGGTCTAGTACTCAA
AGCGTCTGCTTCCAAATCAAAGAAACTTGCGATGCGATCTTCCAATTTAT
TTGTTCCTGATGAAGATATCGATTCATTCATGGTGAACTATGATGATGCT
TTAAAAACAAAGGTGAGATTTTTATTCTATTTTAAAAAGCAGCGATGCCT
AAACATATTTTAATTTATTAAATTCTCTAGGAGTGACCTTTAAAATTTTT
CAAAATCAAATCAAAGCAATCTTAATCTAAGAAGCTGTGAAATTAATATT
TTGACCTATAAAAATTGAGATGCTATGAGTCCTCATGAGTCCTTATATGT
TCTGATATACTGTGTTACAAAATATTATAATTGAAAGTCATTGTAGTTCT
TTAGGAACTTCTTACTAGGATTGCAGTAACTTCCAAGCCGGAAACAATCT
TCGATCGAAAAGAAAAACAAAGAAATTAAGTGTTACCGGAATTTTCGGAA
TGTCTTGTAGACACGAATTTCCAAAACTCTTCCTAAATATGAGGCATGGT
GAAAGGTATTAAAATGAGTTGAATTTTATCCCCAACAATTAAATTGAATC
TCAAGGAGAATAGAATCAAATACAATTTTAATGAAGTTTGAAAAAAGAAT
TTCTTTCCAAGATCTTCAGATCCATTTTAAGCGCTTGAATCTTGGCAACT
TGGTTACTTATAAAAATAACGTGTAGTATAATTCCTTAGAAATGAATATT
TGTGGGAAGATATTTTCCCGAAAGCAATCTTTGTGGAACTGCTCTGAAAT
CATAAATCGATCCTAAATCTGGTCTTTCTTGGACAAAGTTCATCTGCAAA
ATTTTGGCAAAAATAAATTAACGAAATTTAAGCCAGGGTGAGCTCATTTT
CCATATGCTACTCTTTGGTGCTTAATTTTAGGGGACAATAGAATAAGCGG
GACGGGTGGGTACTCGAGAATAAAATCAACAAAATCGGGGAGGGGTCATA
ATGTGTCTGATTGGGGCCTGATTGTGCTGAAGATTCCTTGGAATCTTGGA
AAATGAAGCTTTTAACCCTTTTTTGGTACTTCGTAGGATAAAAGTCATAA
AATGGGAGGTCATTATTAATGATATCGGGGTTGAAAAATTATTGTACATC
ATATAAAAATTTTCAGGCTGGGATATGCTGTGTATTTACTTGACCGTTTG
TTGGAAGAAAATCATGACAAAAGTTTACTCACTCACGTTATATATGACAT
AGCCTGTGTATTAAAATCGCATTTGAAGGTATGTACACTTACTGTATTCT
TATTTCCAATGTCATTCTCAAAGATTATAGCGACGCCGGGTACCTGCTAG
TATTAGCGATGTTTTGCTCTTCATCTATGACTAATGTTCACAAGCAAACC
ACATTAGACGTTCTTTGCTTTTTTAAAGAAAAAGAACACGTTTACGAAGT
ACAAAGATTTCCACTTTGGAATACCAGTTTTTCACTCATATGGTCACAGA
GGGGATTGTCAGGTAATAATTTTTCTTCTCCGCCATTATGATGAATGTAT
CTTCGTCATCCTGGAGTGGCAATAAACAAAATTGAAGCACGCTTTGATGA
TGCCCTTATTATCACCCTCCGTTACACTAGAAAATATCAGTAATACACTC
TTCTTGAGATGCATAAATTTATTGTTGTCCTCGTTTTCAAACAGATTTCA
TTGTTATAAAATTACATATTCACAATGATAATTGTGTTGTTTACACCTCA
TGAGACATTTTGAATTTCAAGTACTTTTGTTTTAGAGTTAATGTTTGCCT
TTTGGGAATTTAAATTGGTTTAAATGTATAATTTCGTAGCAATGAAATCT
GTTTGAAAACGAGGACAACAATAAATTTATGCATCTCGAGAAGAGTGTAT
TCCCTGAACTTTATTGTTTATCCAGGTAAAGAATTCCATTCGTCGGCTTG
AAACGTTTGGTTTGATGGATGGAGAACTGATGGAGCGCCTGTGGTCTTAC
CTGAGGTCGTTTTCAAAGATAACCAAAGAAATGACTCCGGCGCATCGAAC
TGACTTACTCAGTGATGCCTTGATGCACTTTGGCTCAAAGAAAATGGGAA
ACATAGGCAAGTACTTTAAGAAACATTCGAGATCCATCTTATAAATTCTT
TGACTTGTGACGTTTTATTTAGACTAAAACACAAGCATACTATTTTTCAA
TTTTTTTATTTTTCGTATAAGCTTGCACAATTTTTGCTTTAGGGAAATAT
CTTGTATTTTTGCGTAACAAGGCGATCGAAACCGTGAATTCCTGTGAGTC
GGAGATTAAAGCGATATGCTCTAAACTGACTGGTAATGGTTCCTTTCATT
GTCATTCAGATCGTGTCTACAATCCATTATGGTATAAATAAGTATTTTGA
TTCCCTACTGTTTATTTACTAGTTGTAGGAAAACTATAATTATTATACCT
TTATCTGCGGGAGAAAACTCGTTCGTCAGTTCTTGAAATTCAATCACATG
AAAGTCTCTCCCCTCTAGGTAAATCGTAATGATCCCTATCATAAAAAGGA
AATAAAGAGTATTGTATTCAGTGAAATAAAAAAGCTACTACTTAGCAATT
CATCAATCTCATTCCGTTGTAGAAGTTAAAGTGGATGAGAAAGTCATTGA
AGCTTGGAAACGAGAGGAAGACAGTGTTGTAAACAAGGACAAAAGGCCAC
TGCAACCAGGTCATTACTGCTTCTACCACAGCACTTTTCTTGGACTACTT
AATCTATTTACTTACTTTAATTTATCTTAATTTGCTTGAGCGCTTTACGT
TGTAACAGAACTTAAAGAATAATGATTTTAGGCTTTTAGAACCATTTTTT
GTATTATTTTTCAGATATACAACCGATCTGTATTTTGAGGACATCTAGGC
AACTATTGACAAAAGCATTGACGGTACTCTACTGACGGACACGACAAATA
ATATTCTAGGACAAATCTTCAAACGTTCAGCCAATTTGAAAACAATGACA
GTACTCCTTTGACATTGACGAATAAATAAAATAATAACGTAGCGTTAGAA
TTTTGTAGCATTTTACTTCTTTATAATTAGAGGTAAGCTTATAATTCAGC
TACGTGTTATAGGCATTGGGTTTAAAGTCCCGAAGGGGCTAGACGTGAAA
CACCTGGATGGGACATTTCCTAGCTATTTAATCTTTATCTTTATCCAGAA
CACCTGCGTATGGTTTTTACACAAATGCCGGATTGAAATTAAATCTATCA
CTAGATTTCGAAAAATATAGTACTTGAAAACAAAGAATTAAGTGGTTTCA
CTTTTCTTGCCTGTAAACAAAAGTTTCTACTCTAGCCCTTCGGGCTTTAA
ACTTAATGGTAATAGCAATGTGCGTTTTTCTTTTTAGATGCTGCCGACTG
GAGACAAATTTATTACGAAAAGCTTAAAACCTTCAACAGGGAATCTTCTT
TAGCACTGATGAGTGAAAAAGTATCTGATGTTGCCTTACATCAACGAAAA
GCAAAACG Coding sequence (CDS) from alignment at sc0000079_pilon:808192..814449- >MSTRG.11098.7.p2 ID=MSTRG.11098.7.p2|Name=MSTRG.11098.7.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2220bp|location=Sequence derived from alignment at sc0000079_pilon:808192..814449- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGCCGACTGGAGACAAATTTATTACGAAAAGCTTAAAACCTTCAAC
AGGGAATCTTCTTTAGATATACAACCGATCTGTATTTTGAGGACATCTAG
GCAACTATTGACAAAAGCATTGACGAAGTTAAAGTGGATGAGAAAGTCAT
TGAAGCTTGGAAACGAGAGGAAGACAGTGTTGTAAACAAGGACAAAAGGC
CACTGCAACCAGGGAAATATCTTGTATTTTTGCGTAACAAGGCGATCGAA
ACCGTGAATTCCTGTGAGTCGGAGATTAAAGCGATATGCTCTAAACTGAC
TGATGGATGGAGAACTGATGGAGCGCCTGTGGTCTTACCTGAGGTCGTTT
TCAAAGATAACCAAAGAAATGACTCCGGCGCATCGAACTGACTTACTCAG
TGATGCCTTGATGCACTTTGGCTCAAAGAAAATGGGAAACATAGATGCTG
CCGACTGGAGACAAATTTATTACGAAAAGCTTAAAACCTTCAACAGGGAA
TCTTCTTTAGATATACAACCGATCTGTATTTTGAGGACATCTAGGCAACT
ATTGACAAAAGCATTGACGAAGTTAAAGTGGATGAGAAAGTCATTGAAGC
TTGGAAACGAGAGGAAGACAGTGTTGTAAACAAGGACAAAAGGCCACTGC
AACCAGGGAAATATCTTGTATTTTTGCGTAACAAGGCGATCGAAACCGTG
AATTCCTGTGAGTCGGAGATTAAAGCGATATGCTCTAAACTGACTGATGG
ATGGAGAACTGATGGAGCGCCTGTGGTCTTACCTGAGGTCGTTTTCAAAG
ATAACCAAAGAAATGACTCCGGCGCATCGAACTGACTTACTCAGTGATGC
CTTGATGCACTTTGGCTCAAAGAAAATGGGAAACATAGATGCTGCCGACT
GGAGACAAATTTATTACGAAAAGCTTAAAACCTTCAACAGGGAATCTTCT
TTAGATATACAACCGATCTGTATTTTGAGGACATCTAGGCAACTATTGAC
AAAAGCATTGACGAAGTTAAAGTGGATGAGAAAGTCATTGAAGCTTGGAA
ACGAGAGGAAGACAGTGTTGTAAACAAGGACAAAAGGCCACTGCAACCAG
GGAAATATCTTGTATTTTTGCGTAACAAGGCGATCGAAACCGTGAATTCC
TGTGAGTCGGAGATTAAAGCGATATGCTCTAAACTGACTGATGGATGGAG
AACTGATGGAGCGCCTGTGGTCTTACCTGAGGTCGTTTTCAAAGATAACC
AAAGAAATGACTCCGGCGCATCGAACTGACTTACTCAGTGATGCCTTGAT
GCACTTTGGCTCAAAGAAAATGGGAAACATAGATGCTGCCGACTGGAGAC
AAATTTATTACGAAAAGCTTAAAACCTTCAACAGGGAATCTTCTTTAGAT
ATACAACCGATCTGTATTTTGAGGACATCTAGGCAACTATTGACAAAAGC
ATTGACGAAGTTAAAGTGGATGAGAAAGTCATTGAAGCTTGGAAACGAGA
GGAAGACAGTGTTGTAAACAAGGACAAAAGGCCACTGCAACCAGGGAAAT
ATCTTGTATTTTTGCGTAACAAGGCGATCGAAACCGTGAATTCCTGTGAG
TCGGAGATTAAAGCGATATGCTCTAAACTGACTGATGGATGGAGAACTGA
TGGAGCGCCTGTGGTCTTACCTGAGGTCGTTTTCAAAGATAACCAAAGAA
ATGACTCCGGCGCATCGAACTGACTTACTCAGTGATGCCTTGATGCACTT
TGGCTCAAAGAAAATGGGAAACATAGATGCTGCCGACTGGAGACAAATTT
ATTACGAAAAGCTTAAAACCTTCAACAGGGAATCTTCTTTAGATATACAA
CCGATCTGTATTTTGAGGACATCTAGGCAACTATTGACAAAAGCATTGAC
GAAGTTAAAGTGGATGAGAAAGTCATTGAAGCTTGGAAACGAGAGGAAGA
CAGTGTTGTAAACAAGGACAAAAGGCCACTGCAACCAGGGAAATATCTTG
TATTTTTGCGTAACAAGGCGATCGAAACCGTGAATTCCTGTGAGTCGGAG
ATTAAAGCGATATGCTCTAAACTGACTGATGGATGGAGAACTGATGGAGC
GCCTGTGGTCTTACCTGAGGTCGTTTTCAAAGATAACCAAAGAAATGACT
CCGGCGCATCGAACTGACTTACTCAGTGATGCCTTGATGCACTTTGGCTC
AAAGAAAATGGGAAACATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079_pilon | genome | sc0000079_pilon:808192..814449 - |
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