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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:803038..805576+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11096.1.p1 ID=MSTRG.11096.1.p1|Name=MSTRG.11096.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2539bp|location=Sequence derived from alignment at sc0000079_pilon:803038..805576+ (Clytia hemisphaerica_ch_hm2_pilon)
tcACTAGTAATTTGGGATCAGATCTATgcttattttgtcaaaaattatga
caaaaatCACAACAGAGAAAAATCGGGGGCACAACAAAAGAGACGAGTAC
GACAAAACATAAAGACCAAAGTGATGGTATgcattattattttaaaatta
ttgtcTCTGTAAACTATTTAATTGAATTATCTTACAAAGACAAATATCAT
ACTATGGAAGATATCACCAATTTATTCTAGTTAATGTACTGTAAGTAAAC
TATATATTTTGTTTCCAAGTATTTTTCTTAGTAAATTTCTTCACTCATAG
AAAATATGTAAAGGAATTGAGAGAGGTGAAAGTGTGGAGGAAATCCTGAA
GAAAGTTGCTGACTACGTCTCAACATTatttaaagtaatttattttattg
tgtATGCTTTCAACAGAAAAGTTAAAgagccaaaaataaaaattatttga
acCAGTTAAAACAATTACTGCACAGTTCTTCATGCAATCTCCAGGCAata
gattattttattttcgcATAACTACCAAAAAGTAAAGTTCTTTtgccaaa
aattgaaaacaagttCAAATATGCTAAATGTGACATGTTTTGTGAAAATT
GAACAAAtagtttttcctttaaaattatCTAGGTAGCTGTAGAGATAAAA
ATTGGTTCATTCCATCATAAAAGTGGTTGTGATGATGAGGTATTTCTTTG
tctaaaaattttgttattttaaagAAGTATGACCTTTTGATTTATGTGAA
TAAAACTACTgacttcaaaataatttctcaaaattgattaaaaggctttt
taaaagtgttttactccacaatgcaatccacaaaatgtgtaaccgtacat
cctgtgcccatgttcaggagttgccataaagccattatggtaataaccgg
gagggcacattgctatacattgtaattTTTCCAACTACTTAGttaccttt
tttttcttcaaaataaaggtTGATAATTACATAGGTGGTGGTAAAGGAGA
AGAAAATGATGATAGCAAAACTGATGATAGCAAAACTGATGAAATTAACA
ATGATAATAACGTaaaaactaatgaaaataaTGATAACTGGTCTACTGAA
GATTATGAAAGTGAAGAACAGGAAAAggtttcattttgatttttaaaaca
gatttgatcaatgtattgtttttaataaaattttgtttgttttacttgat
agtAAGCTATGGTTATAACCTCTTTGCCCCTTTATATTAGGTACTTCAGT
CATCCCCCAAGCGCTTTAAAAGATGGAAAGTAGTAGAGTCAGAGGTGGAT
ATAAACAAAAGGCGCCTAGAGAATGCTAATGCACAAATCAAACGACTTGA
GAACTTTAATAGAGCTCAATCAGACACAATTAGCGTCCTCAAAGAAAAGA
ATGCTTCTCTCTCCCACCGCAATGCGGAATATACAAAATTGAAGATCATA
CAGCAGCTTGGAGAGAGACGTTCTACTCTAATGGTTGACGCTTCATTGTT
TAGCAAAACTTTTCACTGCGGGGATCAACTAATGCAAGAGCAAGACTCCA
CAATAATCGATCCAGAGAGTTTTAAAGTGGCAAAGAAAGTATCTTTGGCT
AGTGGTACTTTCTCTAATTCTGAGAAAGCTGTCTTTCCTGATGGTGACTC
AGTAGTGATCAAGTCCTTAAATGGCAGTTTTGGCATGCAAGCTCTTGCAG
TTGCATCACATGAGCATCGAATTCTGACCTTTTTAGGAGTTCATCCAAAC
ATTGTTCAAACTATTGGTCTAGTGCAGTTCAGCAATAACTTTGCAcatat
tttaaactttgaaactgGGTGGACACTCCAACACGAGATTGATAAGAAAT
TTGTAATGTCCTTGGATAAATTAAAGCAGCATATACTTGGTATTTCAAGT
GCCCTTCAACATCTGTTTTCAAGAGGTGTTCTTCACAATAATTTGGTTGC
CAGTAACATTATTTTGACCGACCGCACTAAACCAATACTGATGGGATTCA
CGTTTGCGTGTCGTGAGAGTTGTGGTAAGGCAAAAGTTGAAGATGTTTTA
AAGCTTTTCAGTAATCAAAGTCACTTTGCCCCTGAACTCTTCAGAGGGTC
AAAGGTCACCTATTCGTCCGATATTTATTCGTTTGGCATCCTCCTCCAGC
GAATATTGAAGAGACCTTCATCGTTTTCATTGGAAGATGTACTCAAGACA
CGGTTAGAGTGCATTGCTCAGCATTGCGTGGAAAAATCTCGTGGAAAGAG
ACTACCCCATCTATTTTTGCAGAGCAGGCTAATAGCGATCATTGAAAATT
CCTGATTTTATGGTTGTTAAACTTAAAACTTGAGTGGCAGACATAATATA
TACAAAAACTTTCGTTCCTCTAGAAAATAGATGTTGATTGCAAACAAACT
CTCTTATGTAAAGTAATCAAATACAAGAATCAAATAAACTAAACCTGtca
acctttttttataagcatgagTTGTTTGCTTTATTCTTTAAAGATTGGAA
CCTTTTTTATGCATAcactttcccttttttttcccatcc Coding sequence (CDS) from alignment at sc0000079_pilon:803038..805576+ >MSTRG.11096.1.p1 ID=MSTRG.11096.1.p1|Name=MSTRG.11096.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=7455bp|location=Sequence derived from alignment at sc0000079_pilon:803038..805576+ (Clytia hemisphaerica_ch_hm2_pilon)
tcACTAGTAATTTGGGATCAGATCTATgcttattttgtcaaaaattatga
caaaaatCACAACAGAGAAAAATCGGGGGCACAACAAAAGAGACGAGTAC
GACAAAACATAAAGACCAAAGTGATGAAAATATGTAAAGGAATTGAGAGA
GGTGAAAGTGTGGAGGAAATCCTGAAGAAAGTTGCTGACTACGTCTCAAC
ATTatttaaaGTAGCTGTAGAGATAAAAATTGGTTCATTCCATCATAAAA
GTGGTTGTGATGATGAGgtTGATAATTACATAGGTGGTGGTAAAGGAGAA
GAAAATGATGATAGCAAAACTGATGATAGCAAAACTGATGAAATTAACAA
TGATAATAACGTaaaaactaatgaaaataaTGATAACTGGTCTACTGAAG
ATTATGAAAGTGAAGAACAGGAAAAgGTACTTCAGTCATCCCCCAAGCGC
TTTAAAAGATGGAAAGTAGTAGAGTCAGAGGTGGATATAAACAAAAGGCG
CCTAGAGAATGCTAATGCACAAATCAAACGACTTGAGAACTTTAATAGAG
CTCAATCAGACACAATTAGCGTCCTCAAAGAAAAGAATGCTTCTCTCTCC
CACCGCAATGCGGAATATACAAAATTGAAGATCATACAGCAGCTTGGAGA
GAGACGTTCTACTCTAATGGTTGACGCTTCATTGTTTAGCAAAACTTTTC
ACTGCGGGGATCAACTAATGCAAGAGCAAGACTCCACAATAATCGATCCA
GAGAGTTTTAAAGTGGCAAAGAAAGTATCTTTGGCTAGTGGTACTTTCTC
TAATTCTGAGAAAGCTGTCTTTCCTGATGGTGACTCAGTAGTGATCAAGT
CCTTAAATGGCAGTTTTGGCATGCAAGCTCTTGCAGTTGCATCACATGAG
CATCGAATTCTGACCTTTTTAGGAGTTCATCCAAACATTGTTCAAACTAT
TGGTCTAGTGCAGTTCAGCAATAACTTTGCAcatattttaaactttgaaa
ctgGGTGGACACTCCAACACGAGATTGATAAGAAATTTGTAATGTCCTTG
GATAAATTAAAGCAGCATATACTTGGTATTTCAAGTGCCCTTCAACATCT
GTTTTCAAGAGGTGTTCTTCACAATAATTTGGTTGCCAGTAACATTATTT
TGACCGACCGCACTAAACCAATACTGATGGGATTCACGTTTGCGTGTCGT
GAGAGTTGTGGTAAGGCAAAAGTTGAAGATGTTTTAAAGCTTTTCAGTAA
TCAAAGTCACTTTGCCCCTGAACTCTTCAGAGGGTCAAAGGTCACCTATT
CGTCCGATATTTATTCGTTTGGCATCCTCCTCCAGCGAATATTGAAGAGA
CCTTCATCGTTTTCATTGGAAGATGTACTCAAGACACGGTTAGAGTGCAT
TGCTCAGCATTGCGTGGAAAAATCTCGTGGAAAGAGACTACCCCATCTAT
TTTTGCAGAGCAGGCTAATAGCGATCATTGAAAATTCCTGAtcACTAGTA
ATTTGGGATCAGATCTATgcttattttgtcaaaaattatgacaaaaatCA
CAACAGAGAAAAATCGGGGGCACAACAAAAGAGACGAGTACGACAAAACA
TAAAGACCAAAGTGATGAAAATATGTAAAGGAATTGAGAGAGGTGAAAGT
GTGGAGGAAATCCTGAAGAAAGTTGCTGACTACGTCTCAACATTatttaa
aGTAGCTGTAGAGATAAAAATTGGTTCATTCCATCATAAAAGTGGTTGTG
ATGATGAGgtTGATAATTACATAGGTGGTGGTAAAGGAGAAGAAAATGAT
GATAGCAAAACTGATGATAGCAAAACTGATGAAATTAACAATGATAATAA
CGTaaaaactaatgaaaataaTGATAACTGGTCTACTGAAGATTATGAAA
GTGAAGAACAGGAAAAgGTACTTCAGTCATCCCCCAAGCGCTTTAAAAGA
TGGAAAGTAGTAGAGTCAGAGGTGGATATAAACAAAAGGCGCCTAGAGAA
TGCTAATGCACAAATCAAACGACTTGAGAACTTTAATAGAGCTCAATCAG
ACACAATTAGCGTCCTCAAAGAAAAGAATGCTTCTCTCTCCCACCGCAAT
GCGGAATATACAAAATTGAAGATCATACAGCAGCTTGGAGAGAGACGTTC
TACTCTAATGGTTGACGCTTCATTGTTTAGCAAAACTTTTCACTGCGGGG
ATCAACTAATGCAAGAGCAAGACTCCACAATAATCGATCCAGAGAGTTTT
AAAGTGGCAAAGAAAGTATCTTTGGCTAGTGGTACTTTCTCTAATTCTGA
GAAAGCTGTCTTTCCTGATGGTGACTCAGTAGTGATCAAGTCCTTAAATG
GCAGTTTTGGCATGCAAGCTCTTGCAGTTGCATCACATGAGCATCGAATT
CTGACCTTTTTAGGAGTTCATCCAAACATTGTTCAAACTATTGGTCTAGT
GCAGTTCAGCAATAACTTTGCAcatattttaaactttgaaactgGGTGGA
CACTCCAACACGAGATTGATAAGAAATTTGTAATGTCCTTGGATAAATTA
AAGCAGCATATACTTGGTATTTCAAGTGCCCTTCAACATCTGTTTTCAAG
AGGTGTTCTTCACAATAATTTGGTTGCCAGTAACATTATTTTGACCGACC
GCACTAAACCAATACTGATGGGATTCACGTTTGCGTGTCGTGAGAGTTGT
GGTAAGGCAAAAGTTGAAGATGTTTTAAAGCTTTTCAGTAATCAAAGTCA
CTTTGCCCCTGAACTCTTCAGAGGGTCAAAGGTCACCTATTCGTCCGATA
TTTATTCGTTTGGCATCCTCCTCCAGCGAATATTGAAGAGACCTTCATCG
TTTTCATTGGAAGATGTACTCAAGACACGGTTAGAGTGCATTGCTCAGCA
TTGCGTGGAAAAATCTCGTGGAAAGAGACTACCCCATCTATTTTTGCAGA
GCAGGCTAATAGCGATCATTGAAAATTCCTGAtcACTAGTAATTTGGGAT
CAGATCTATgcttattttgtcaaaaattatgacaaaaatCACAACAGAGA
AAAATCGGGGGCACAACAAAAGAGACGAGTACGACAAAACATAAAGACCA
AAGTGATGAAAATATGTAAAGGAATTGAGAGAGGTGAAAGTGTGGAGGAA
ATCCTGAAGAAAGTTGCTGACTACGTCTCAACATTatttaaaGTAGCTGT
AGAGATAAAAATTGGTTCATTCCATCATAAAAGTGGTTGTGATGATGAGg
tTGATAATTACATAGGTGGTGGTAAAGGAGAAGAAAATGATGATAGCAAA
ACTGATGATAGCAAAACTGATGAAATTAACAATGATAATAACGTaaaaac
taatgaaaataaTGATAACTGGTCTACTGAAGATTATGAAAGTGAAGAAC
AGGAAAAgGTACTTCAGTCATCCCCCAAGCGCTTTAAAAGATGGAAAGTA
GTAGAGTCAGAGGTGGATATAAACAAAAGGCGCCTAGAGAATGCTAATGC
ACAAATCAAACGACTTGAGAACTTTAATAGAGCTCAATCAGACACAATTA
GCGTCCTCAAAGAAAAGAATGCTTCTCTCTCCCACCGCAATGCGGAATAT
ACAAAATTGAAGATCATACAGCAGCTTGGAGAGAGACGTTCTACTCTAAT
GGTTGACGCTTCATTGTTTAGCAAAACTTTTCACTGCGGGGATCAACTAA
TGCAAGAGCAAGACTCCACAATAATCGATCCAGAGAGTTTTAAAGTGGCA
AAGAAAGTATCTTTGGCTAGTGGTACTTTCTCTAATTCTGAGAAAGCTGT
CTTTCCTGATGGTGACTCAGTAGTGATCAAGTCCTTAAATGGCAGTTTTG
GCATGCAAGCTCTTGCAGTTGCATCACATGAGCATCGAATTCTGACCTTT
TTAGGAGTTCATCCAAACATTGTTCAAACTATTGGTCTAGTGCAGTTCAG
CAATAACTTTGCAcatattttaaactttgaaactgGGTGGACACTCCAAC
ACGAGATTGATAAGAAATTTGTAATGTCCTTGGATAAATTAAAGCAGCAT
ATACTTGGTATTTCAAGTGCCCTTCAACATCTGTTTTCAAGAGGTGTTCT
TCACAATAATTTGGTTGCCAGTAACATTATTTTGACCGACCGCACTAAAC
CAATACTGATGGGATTCACGTTTGCGTGTCGTGAGAGTTGTGGTAAGGCA
AAAGTTGAAGATGTTTTAAAGCTTTTCAGTAATCAAAGTCACTTTGCCCC
TGAACTCTTCAGAGGGTCAAAGGTCACCTATTCGTCCGATATTTATTCGT
TTGGCATCCTCCTCCAGCGAATATTGAAGAGACCTTCATCGTTTTCATTG
GAAGATGTACTCAAGACACGGTTAGAGTGCATTGCTCAGCATTGCGTGGA
AAAATCTCGTGGAAAGAGACTACCCCATCTATTTTTGCAGAGCAGGCTAA
TAGCGATCATTGAAAATTCCTGAtcACTAGTAATTTGGGATCAGATCTAT
gcttattttgtcaaaaattatgacaaaaatCACAACAGAGAAAAATCGGG
GGCACAACAAAAGAGACGAGTACGACAAAACATAAAGACCAAAGTGATGA
AAATATGTAAAGGAATTGAGAGAGGTGAAAGTGTGGAGGAAATCCTGAAG
AAAGTTGCTGACTACGTCTCAACATTatttaaaGTAGCTGTAGAGATAAA
AATTGGTTCATTCCATCATAAAAGTGGTTGTGATGATGAGgtTGATAATT
ACATAGGTGGTGGTAAAGGAGAAGAAAATGATGATAGCAAAACTGATGAT
AGCAAAACTGATGAAATTAACAATGATAATAACGTaaaaactaatgaaaa
taaTGATAACTGGTCTACTGAAGATTATGAAAGTGAAGAACAGGAAAAgG
TACTTCAGTCATCCCCCAAGCGCTTTAAAAGATGGAAAGTAGTAGAGTCA
GAGGTGGATATAAACAAAAGGCGCCTAGAGAATGCTAATGCACAAATCAA
ACGACTTGAGAACTTTAATAGAGCTCAATCAGACACAATTAGCGTCCTCA
AAGAAAAGAATGCTTCTCTCTCCCACCGCAATGCGGAATATACAAAATTG
AAGATCATACAGCAGCTTGGAGAGAGACGTTCTACTCTAATGGTTGACGC
TTCATTGTTTAGCAAAACTTTTCACTGCGGGGATCAACTAATGCAAGAGC
AAGACTCCACAATAATCGATCCAGAGAGTTTTAAAGTGGCAAAGAAAGTA
TCTTTGGCTAGTGGTACTTTCTCTAATTCTGAGAAAGCTGTCTTTCCTGA
TGGTGACTCAGTAGTGATCAAGTCCTTAAATGGCAGTTTTGGCATGCAAG
CTCTTGCAGTTGCATCACATGAGCATCGAATTCTGACCTTTTTAGGAGTT
CATCCAAACATTGTTCAAACTATTGGTCTAGTGCAGTTCAGCAATAACTT
TGCAcatattttaaactttgaaactgGGTGGACACTCCAACACGAGATTG
ATAAGAAATTTGTAATGTCCTTGGATAAATTAAAGCAGCATATACTTGGT
ATTTCAAGTGCCCTTCAACATCTGTTTTCAAGAGGTGTTCTTCACAATAA
TTTGGTTGCCAGTAACATTATTTTGACCGACCGCACTAAACCAATACTGA
TGGGATTCACGTTTGCGTGTCGTGAGAGTTGTGGTAAGGCAAAAGTTGAA
GATGTTTTAAAGCTTTTCAGTAATCAAAGTCACTTTGCCCCTGAACTCTT
CAGAGGGTCAAAGGTCACCTATTCGTCCGATATTTATTCGTTTGGCATCC
TCCTCCAGCGAATATTGAAGAGACCTTCATCGTTTTCATTGGAAGATGTA
CTCAAGACACGGTTAGAGTGCATTGCTCAGCATTGCGTGGAAAAATCTCG
TGGAAAGAGACTACCCCATCTATTTTTGCAGAGCAGGCTAATAGCGATCA
TTGAAAATTCCTGAtcACTAGTAATTTGGGATCAGATCTATgcttatttt
gtcaaaaattatgacaaaaatCACAACAGAGAAAAATCGGGGGCACAACA
AAAGAGACGAGTACGACAAAACATAAAGACCAAAGTGATGAAAATATGTA
AAGGAATTGAGAGAGGTGAAAGTGTGGAGGAAATCCTGAAGAAAGTTGCT
GACTACGTCTCAACATTatttaaaGTAGCTGTAGAGATAAAAATTGGTTC
ATTCCATCATAAAAGTGGTTGTGATGATGAGgtTGATAATTACATAGGTG
GTGGTAAAGGAGAAGAAAATGATGATAGCAAAACTGATGATAGCAAAACT
GATGAAATTAACAATGATAATAACGTaaaaactaatgaaaataaTGATAA
CTGGTCTACTGAAGATTATGAAAGTGAAGAACAGGAAAAgGTACTTCAGT
CATCCCCCAAGCGCTTTAAAAGATGGAAAGTAGTAGAGTCAGAGGTGGAT
ATAAACAAAAGGCGCCTAGAGAATGCTAATGCACAAATCAAACGACTTGA
GAACTTTAATAGAGCTCAATCAGACACAATTAGCGTCCTCAAAGAAAAGA
ATGCTTCTCTCTCCCACCGCAATGCGGAATATACAAAATTGAAGATCATA
CAGCAGCTTGGAGAGAGACGTTCTACTCTAATGGTTGACGCTTCATTGTT
TAGCAAAACTTTTCACTGCGGGGATCAACTAATGCAAGAGCAAGACTCCA
CAATAATCGATCCAGAGAGTTTTAAAGTGGCAAAGAAAGTATCTTTGGCT
AGTGGTACTTTCTCTAATTCTGAGAAAGCTGTCTTTCCTGATGGTGACTC
AGTAGTGATCAAGTCCTTAAATGGCAGTTTTGGCATGCAAGCTCTTGCAG
TTGCATCACATGAGCATCGAATTCTGACCTTTTTAGGAGTTCATCCAAAC
ATTGTTCAAACTATTGGTCTAGTGCAGTTCAGCAATAACTTTGCAcatat
tttaaactttgaaactgGGTGGACACTCCAACACGAGATTGATAAGAAAT
TTGTAATGTCCTTGGATAAATTAAAGCAGCATATACTTGGTATTTCAAGT
GCCCTTCAACATCTGTTTTCAAGAGGTGTTCTTCACAATAATTTGGTTGC
CAGTAACATTATTTTGACCGACCGCACTAAACCAATACTGATGGGATTCA
CGTTTGCGTGTCGTGAGAGTTGTGGTAAGGCAAAAGTTGAAGATGTTTTA
AAGCTTTTCAGTAATCAAAGTCACTTTGCCCCTGAACTCTTCAGAGGGTC
AAAGGTCACCTATTCGTCCGATATTTATTCGTTTGGCATCCTCCTCCAGC
GAATATTGAAGAGACCTTCATCGTTTTCATTGGAAGATGTACTCAAGACA
CGGTTAGAGTGCATTGCTCAGCATTGCGTGGAAAAATCTCGTGGAAAGAG
ACTACCCCATCTATTTTTGCAGAGCAGGCTAATAGCGATCATTGAAAATT
CCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079_pilon | genome | sc0000079_pilon:803038..805576 + |
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