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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:443774..447222+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11070.1.p1 ID=MSTRG.11070.1.p1|Name=MSTRG.11070.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3449bp|location=Sequence derived from alignment at sc0000079_pilon:443774..447222+ (Clytia hemisphaerica_ch_hm2_pilon)
TGGTAAAGGCTGCTGGCATTGGCCTTTAATTTAATCGTTTAACAAAAGCA
GCTAAAGCTCAAGTGAGGTAGATAGAAAAGAGAGGGGTCACCCACCAACA
ACCAACTGACCGAGCATAgtaagttttgatttttgtaatattttgaactc
ttttcttgggttgatttttgagttaaatgaaaaaataaaataaagaaagg
aaaGCAGACAGCCAGACCAGACTTCTGTATTTTGTATTTCCTTTCTTCCT
TCTTTTTCTGCAAGTTTAACAAAAAGTTCTACCACAATAGGGCATGCGCC
TTTTCTGTACTTCACAAGCAGTTACCTGCACATATTTATTATATTGTTGC
TCTTCTTCATTTCTTCCCCCCGTTTGGTCTCAGAGTCTGGTCTGGCATCT
GGTAAGGTAAacaacccgtttttgcctgtgTTTCCTTAATAGGAAAAGTT
GGTTTTTctagcttttcttaagttcgaACAGAATCCTCTCAAATTTTAAC
ATACTCTtgctatagaccttttttcaaagacgacgtcctgttgaataatt
atgtagtccagccataaaaacaatgatagagccatgcataattactgtat
catgcatattgtaataattatgcatggttttatcattgtttttctgctgg
actacataattattcaacagggtggcctctttgaaaaaaggtctatttat
gATATGATACTACCCTGAAAAACTTTtcacctggctggtcattaaaatac
aactacgcagctctgctcgcagctctactctaccatttttgttttgattt
aactttgtattttaatgacaagCCAGGtcttttatttgagggctatgcat
gttagcctctactgatgcaagttacccaatctcaagGTATATTACCGTAA
GTGGTCCTTAAATCCGACAGCCCCTACTTTAAATCAGACCTCACAAATAA
CTGgctatatgaaaaaaattctatgtttacaaacattccctctccaagtt
gaacaataaactatattgcaaaaactctcgaaacaaaacatctaacaaga
tgactaaaatgtcaagatgtcaattaaaatgtgataaaaaagtgtgagtt
gtaaaaataagtccCTCTATTATTCCGAAtccgttgctcgtgtttaaaac
gttaacaattttgtaataaaaaaacatgttttgtataagaagcaattatt
atgttatttggttcaattggttcagtgtatcaaatctctcagtttagttg
acactttggtatcttcgttgcatcacagcgaaaggttttttattttagtt
tgtatctttgaaagacctcATCGGAtataggcagggctgtcggatttagg
accactcacggtattccTTCAATTTGTTACATAAGCTTTCTGAACAAGTT
TcgtttattcaattttaaaacagtACCATTATTAATAGTCAGGTTGCTGT
TGCtagaacatttttttagaaatctcagtgtgaagaatctaaaacctttt
taaaacttGTTATGACATCAAAAGATCCAGAAACTTAtgaagtttgtttg
ttttcagttgTTCAAATGCATACACATCCATATTTTCCTTGGGACTTACA
Cgaatgaaattaattaaaaaaatcccaacaaaaaaaatatttaaaagtac
AGTAAGTAATAATCGAAAGTTTTTTCGTTTTAAGCTCAATAAAACAATGG
TAATGTTAAAGAATATCCCTCGAGTTTTGTCACCCGAGTTACTGTCCGTT
TTGGCAAGAATGGGTCATGGTGATGAAATTGTGTTAGCTGATGCCAACTT
TCCAAGCGCTTCAACCGCTAAAGCTGGTCCTGAACTTGTAAGATATTCTT
CAGAAAGTCTCAATGACAGAATAGAATATTCGATAGTGGCCATTAGTGTC
TTTGCATTTTAGCTGCAATATATTTTTCCCAGATCAAAACTCTCTTTTGT
CCTGGACTCGTACAACATTCTATAGTAGCCTTAAGCTCTAGCTGAGTCTC
AATGGAAGATTTAGAATACTAttgtttttgtatttgaattctCATTATAA
AAACGACGTTATTCAACTTATAATTGACAAAAGTTATTTCTTTTATCTCT
AAGATTTATAAAAAGAGATTCTGATCTATCCTCAAGTAAAATCGTGTTTT
TTATGTGTCCAAAATAAGTTAGCTTTATTCAAAATCAATTCGCTTTAAgt
gttttgttttgcttgccatttttcaaccaataggCTTCAAATATAACAAA
TTATAAACCTTTGAAAAGATTATTCATAGCACTataattgaagatgaaaa
attaagaagaaaaatgaagtccATTTTTAGTACTAAGGTACTTTGAAGCT
TCCTGATTTCAGATATACAACTATTTTTCAAATAGAATTGTTACATACGC
AATTATAGATCTTAAAAGGTTGCCTGTTGGAGTAAAAGAAAAGCTACAAA
AAACGAGGCTTTTCGACTCCAAAgagctactctcgggtacttaatagccg
ccccccccccgctaattaatttttcgaaaattttccacccaggacattct
tattccaacccccccgcttattaatttttgggaaaatgtttttgaaagtt
cccttttttgtcctaattcagctgtattagcctccttttcaaaagttttc
cacccaggacatttttattccaacccccccgcttattaggttttgagatt
ttttccaaccccccccctgcttattccaacctccccccccggctattagg
tacccgagagtacttttCAGAGTCTGTAAGCCTCAATGCAAGAACTAACt
acataataaataaataagtaaataaatttATTGTCTTAATTTTCTAACGT
TGttagaatattttttctcaataattatagtgctctgaattatcttttat
GATTTGTTATATTTGAATCAGTTGTTGgaaaatggcaagcaaaacaaaaa
gtagtgcatatttaaaacattttagatAAGAGCTGACGGCCATGGGTGTA
TGGAAATATTGAAAGgcgttttaaaattattaccACTTGATATGTACGTT
GAAGCACCTGTCATGTTAATGGATCCCACCGAAAGTGACAAAGTGAAAGG
AATCAAAACTCCGATCTGGGAAGAATACAAAGCAGCAGTCAATCAATCAG
aagggaaaaatatttcagtttcCTTAATTGAACGATTCGAATTTTATAAA
CGCGCAGAAAAAGCATTTGCAGTCGTTGCTACAGGAGAAAATGCACTTTA
TGGGAATATTATCTTAAAGAAAGGTGTTTTGTAAGCTATGATTTAACtgt
ttactcttaggtgccaaataaacgggggggggttcgaataaacgggggga
cctaattaccggggggttggaaaatggaccttaaaaaccctaaaaatggt
caaaatagactaaatttaggctttttagagaaaacaaggaactttcctt Coding sequence (CDS) from alignment at sc0000079_pilon:443774..447222+ >MSTRG.11070.1.p1 ID=MSTRG.11070.1.p1|Name=MSTRG.11070.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=900bp|location=Sequence derived from alignment at sc0000079_pilon:443774..447222+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAATGTTAAAGAATATCCCTCGAGTTTTGTCACCCGAGTTACTGTC
CGTTTTGGCAAGAATGGGTCATGGTGATGAAATTGTGTTAGCTGATGCCA
ACTTTCCAAGCGCTTCAACCGCTAAAGCTGGTCCTGAACTTatAAGAGCT
GACGGCCATGGGTGTATGGAAATATTGAAAGgcgttttaaaattattacc
ACTTGATATGTACGTTGAAGCACCTGTCATGTTAATGGATCCCACCGAAA
GTGACAAAGTGAAAGGAATCAAAACTCCGATCTGGGAAGAATACAAAGCA
GCAGTCAATCAATCAGaagggaaaaatatttcagtttcCTTAATTGAACG
ATTCGAATTTTATAAACGCGCAGAAAAAGCATTTGCAGTCGTTGCTACAG
GAGAAAATGCACTTTATGGGAATATTATCTTAAAGAAAGGTGTTTTGTAA
ATGGTAATGTTAAAGAATATCCCTCGAGTTTTGTCACCCGAGTTACTGTC
CGTTTTGGCAAGAATGGGTCATGGTGATGAAATTGTGTTAGCTGATGCCA
ACTTTCCAAGCGCTTCAACCGCTAAAGCTGGTCCTGAACTTatAAGAGCT
GACGGCCATGGGTGTATGGAAATATTGAAAGgcgttttaaaattattacc
ACTTGATATGTACGTTGAAGCACCTGTCATGTTAATGGATCCCACCGAAA
GTGACAAAGTGAAAGGAATCAAAACTCCGATCTGGGAAGAATACAAAGCA
GCAGTCAATCAATCAGaagggaaaaatatttcagtttcCTTAATTGAACG
ATTCGAATTTTATAAACGCGCAGAAAAAGCATTTGCAGTCGTTGCTACAG
GAGAAAATGCACTTTATGGGAATATTATCTTAAAGAAAGGTGTTTTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079_pilon | genome | sc0000079_pilon:443774..447222 + |
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