MSTRG.11052.64.p3 (mRNA) -

Overview
NameMSTRG.11052.64.p3
Unique NameMSTRG.11052.64.p3
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000079_pilon:196383..198949+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11052.64.p3 ID=MSTRG.11052.64.p3|Name=MSTRG.11052.64.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2567bp|location=Sequence derived from alignment at sc0000079_pilon:196383..198949+ (Clytia hemisphaerica_ch_hm2_pilon)
TGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTG GTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACT AAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGG TTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTG AACGAGGAGGAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGT CCACTGCGTATTACTGAACGAGGAGGAGGTGGTCCACTGCGTATTACTGA ACGAGAAGGAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGTC CACTGCGTATTACTGAACGAGGAGGAGGTGGTTCACTGCGTGTTACTGAA GGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTC ACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTGCTGAAG GAGGAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCA CTGCTTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTATTACTGAAGG AGGAGGTGGTGGTCCACTGCTTGTTACTGAACGAGAAGGAGGTGGTTCAC TGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAGGA GGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACT GCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAG GAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTG CGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGA AGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGC GTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGTGGA GGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCG TGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAG GAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGT ATTACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGG TGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTG TTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGA GGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTAT TACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTG GTGGTCCACTGCGTATTGCTGAAGGAGGAGGAGGTGGTTCACTGCGTGTT ACTAAAGGAGGAGGTGGTGGTCCACTGCGCATTACTGAACGAGAAGGAGG TCGTTCACTGCGTGTTACTGAAGGTGGAGGAGGTGCTCCGCTGCGTGTTA CTGAACGAGAAGGAAGTGGTCCACTGCGTTTTGCTGAAGGTGGAGGTGGT GGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTGC TGAACGAGAAGGAGGTGGTCCACTGTGCATTGCTAAAGTTGGAGGAGGGG GTGGTCCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCATTGCGTATT ACTGAAGGAGGAGGAGGTGGTGGTCCACTGCGTATCGCTGAAGGAGAAAG AGGTGGTGGTCCACTGCGTATTGCTGAACGAGAAGAAGCTGGTCCACTGC GTATTACTGAAGGAGCAGGAGGTGGTGGTCCACAGTGTATTACTGAAGGC GGAGGATGAGGTGGTTCATTGCGTTTTACTGAAGGAGGAGGTGGTGGGCC ATCGCGCATTACTGGAGGAGGAGGTGGTGGTTCACTCTGCATCGCTGAAG GAGGAGGAGGTGGTGGTCGACTGCGTATTACTGAAGGAGGAGGAGGTGGT CGACTTCTGCTTATTTCAGTTGATGGGCATTGAGGTGAATGAGGTCATAA TGATTTTAACGAATATGTATCCTTGTAGAGGGTTGGAATTTGCAAACTTC CACTGGGTGGTGTTTTGGTTGAAGGAATGAAATTGTCTGTCGGTGGTGAT TGAGGTTATGATGTatgtgaattttctttgaatgccATGTGATCATAAGT AAGAAACTACACATAGAACGTCTGTTTGTATATGTCAACTTAAAACAGTT GCTTGATATTACATAGTAATTATTATAAAATCAAGCAAGACAAAATTGTA TTACTAGTCCAGCTAGACACAACAACAAAATTAGTACGCAGCAAAACCAA AACATACATAGCAGCAGTTCTAACCAACGTAAACACTCAAGTTTCACTTT TAATAAAAACATGCATACGCAAGAAAttaaattatgtcaaaataataTGC ATTGGAGACAAAAAGAAAGGCTGTAGCTTTTGATAGAGCtcaaattacat gttttttttttctactc

Coding sequence (CDS) from alignment at sc0000079_pilon:196383..198949+

>MSTRG.11052.64.p3 ID=MSTRG.11052.64.p3|Name=MSTRG.11052.64.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4734bp|location=Sequence derived from alignment at sc0000079_pilon:196383..198949+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGG
TCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTA
AAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGGAGGAGGTGGT
CCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTATTACTGA
AGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGGAGGAGGTGGTT
CACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCTTGTTACTGAA
CGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCC
ACTGCGTATTACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAG
GAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCA
CTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACG
AGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCAC
TGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGA
GGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACT
GCGTGTTACTGAAGGTGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAG
AAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTG
CGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGG
AGGTGGTGGTCCACTGCGTATTACTGAAGGAGGAGGAGGTGGTTCACTGC
GTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAA
GGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCG
TATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAG
GTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGT
GTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTGCTGAAGGAGGAGG
AGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGCA
TTACTGAACGAGAAGGAGGTCGTTCACTGCGTGTTACTGAAGGTGGAGGA
GGTGCTCCGCTGCGTGTTACTGAACGAGAAGGAAGTGGTCCACTGCGTTT
TGCTGAAGGTGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAG
GTGGTTCACTGCGTGTTGCTGAACGAGAAGGAGGTGGTCCACTGTGCATT
GCTAAAGTTGGAGGAGGGGGTGGTCCACTGCGTATTACTGAAGGAGGAGG
TGGTGGTCCATTGCGTATTACTGAAGGAGGAGGAGGTGGTGGTCCACTGC
GTATCGCTGAAGGAGAAAGAGGTGGTGGTCCACTGCGTATTGCTGAACGA
GAAGAAGCTGGTCCACTGCGTATTACTGAAGGAGCAGGAGGTGGTGGTCC
ACAGTGTATTACTGAAGGCGGAGGATGAGAAGGAGGAGGAGGTGGTTCAC
TGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGA
GAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACT
GCGTATTACTGAACGAGGAGGAGGTGGTCCACTGCGTATTACTGAACGAG
AAGGAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCACTG
CGTATTACTGAACGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGG
AGGTGGTGGTCCACTGCTTGTTACTGAACGAGAAGGAGGTGGTTCACTGC
GTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAGGAGGA
GGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCG
TGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAG
GTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGT
GTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGG
AGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTG
TTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGTGGAGGT
GGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGT
TACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAG
GTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATT
ACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGG
TGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTA
CTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGT
GGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTAC
TGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTG
GTCCACTGCGTATTGCTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACT
AAAGGAGGAGGTGGTGGTCCACTGCGCATTACTGAACGAGAAGGAGGTCG
TTCACTGCGTGTTACTGAAGGTGGAGGAGGTGCTCCGCTGCGTGTTACTG
AACGAGAAGGAAGTGGTCCACTGCGTTTTGCTGAAGGTGGAGGTGGTGGT
CCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTGCTGA
ACGAGAAGGAGGTGGTCCACTGTGCATTGCTAAAGTTGGAGGAGGGGGTG
GTCCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCATTGCGTATTACT
GAAGGAGGAGGAGGTGGTGGTCCACTGCGTATCGCTGAAGGAGAAAGAGG
TGGTGGTCCACTGCGTATTGCTGAACGAGAAGAAGCTGGTCCACTGCGTA
TTACTGAAGGAGCAGGAGGTGGTGGTCCACAGTGTATTACTGAAGGCGGA
GGATGAGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGG
TGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTG
TTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGGAGGA
GGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTAT
TACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGGAGGAG
GTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCTTGTT
ACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGG
TGGTCCACTGCGTATTACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTA
CTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGT
GGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTAC
TGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTG
GTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACT
GAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGG
TTCACTGCGTGTTACTGAAGGTGGAGGTGGTGGTCCACTGCGTGTTACTG
AACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGT
CCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGA
AGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAGGAGGAGGAGGTGGTT
CACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAA
CGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCC
ACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAG
GAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCA
CTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTGCTGAAGG
AGGAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCAC
TGCGCATTACTGAACGAGAAGGAGGTCGTTCACTGCGTGTTACTGAAGGT
GGAGGAGGTGCTCCGCTGCGTGTTACTGAACGAGAAGGAAGTGGTCCACT
GCGTTTTGCTGAAGGTGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAG
AAGGAGGTGGTTCACTGCGTGTTGCTGAACGAGAAGGAGGTGGTCCACTG
TGCATTGCTAAAGTTGGAGGAGGGGGTGGTCCACTGCGTATTACTGAAGG
AGGAGGTGGTGGTCCATTGCGTATTACTGAAGGAGGAGGAGGTGGTGGTC
CACTGCGTATCGCTGAAGGAGAAAGAGGTGGTGGTCCACTGCGTATTGCT
GAACGAGAAGAAGCTGGTCCACTGCGTATTACTGAAGGAGCAGGAGGTGG
TGGTCCACAGTGTATTACTGAAGGCGGAGGATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11052MSTRG.11052Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11052.64.p3.exon1MSTRG.11052.64.p3.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11052.64.p3.exon2MSTRG.11052.64.p3.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11052.64.p3.exon3MSTRG.11052.64.p3.exon3Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11052.64.p3MSTRG.11052.64.p3-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079_pilongenomesc0000079_pilon:196383..198949 +